CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
ORF7a | 110 | I110del | del | ATA | --- | 4438 | 4438 | 1 | 27721-27723 | |
ORF7a | 110 | I110T | nonsyn | aTa | aCa | 3276 | 3275 | 0.999695 | 27721-27723 | |
ORF7a | 110 | I110T | nonsyn | aTA | aCC | 3276 | 1 | 0.00030525 | 27721-27723 | |
ORF7a | 110 | I110del1 | del | Ata | -ta | 1316 | 1303 | 0.990122 | 27721-27723 | |
ORF7a | 110 | I110del1 | del | atA | at- | 1316 | 9 | 0.00683891 | 27721-27723 | |
ORF7a | 110 | I110del1 | del | AtA | -tN | 1316 | 2 | 0.00151976 | 27721-27723 | |
ORF7a | 110 | I110del1 | del | ATA | -NN | 1316 | 1 | 0.000759878 | 27721-27723 | |
ORF7a | 110 | I110del1 | del | AtA | -tG | 1316 | 1 | 0.000759878 | 27721-27723 | |
ORF7a | 110 | I110V | nonsyn | Ata | Gta | 971 | 970 | 0.99897 | 27721-27723 | |
ORF7a | 110 | I110V | nonsyn | AtA | GtT | 971 | 1 | 0.00102987 | 27721-27723 | |
ORF7a | 110 | I110I | syn | atA | atT | 412 | 389 | 0.944175 | 27721-27723 | |
ORF7a | 110 | I110I | syn | atA | atC | 412 | 23 | 0.0558252 | 27721-27723 | |
ORF7a | 110 | I110L | nonsyn | Ata | Tta | 82 | 67 | 0.817073 | 27721-27723 | |
ORF7a | 110 | I110L | nonsyn | Ata | Cta | 82 | 11 | 0.134146 | 27721-27723 | |
ORF7a | 110 | I110L | nonsyn | AtA | CtC | 82 | 4 | 0.0487805 | 27721-27723 | |
ORF7a | 110 | I110M | nonsyn | atA | atG | 55 | 55 | 1 | 27721-27723 | |
ORF7a | 110 | I110del2 | del | aTA | a-- | 25 | 13 | 0.52 | 27721-27723 | |
ORF7a | 110 | I110del2 | del | ATa | --a | 25 | 11 | 0.44 | 27721-27723 | |
ORF7a | 110 | I110del2 | del | ATA | --N | 25 | 1 | 0.04 | 27721-27723 | |
ORF7a | 110 | I110K | nonsyn | aTa | aAa | 10 | 10 | 1 | 27721-27723 | |
ORF7a | 110 | I110R | nonsyn | aTa | aGa | 6 | 6 | 1 | 27721-27723 | |
ORF7a | 110 | I110F | nonsyn | AtA | TtT | 3 | 3 | 1 | 27721-27723 | |
ORF7a | 110 | I110N | nonsyn | aTA | aAC | 3 | 2 | 0.666667 | 27721-27723 | |
ORF7a | 110 | I110N | nonsyn | aTA | aAT | 3 | 1 | 0.333333 | 27721-27723 | |
ORF7a | 110 | I110D | nonsyn | ATA | GAT | 2 | 2 | 1 | 27721-27723 | |
ORF7a | 110 | I110A | nonsyn | ATa | GCa | 2 | 2 | 1 | 27721-27723 | |
ORF7a | 110 | I110H | nonsyn | ATA | CAC | 2 | 2 | 1 | 27721-27723 | |
ORF7a | 110 | I110Q | nonsyn | ATa | CAa | 2 | 2 | 1 | 27721-27723 | |
ORF7a | 110 | I110X | nonsyn | ATa | TAa | 2 | 2 | 1 | 27721-27723 | |
ORF7a | 110 | I110S | nonsyn | ATA | TCG | 1 | 1 | 1 | 27721-27723 | |
ORF7a | 110 | I110Y | nonsyn | ATA | TAT | 1 | 1 | 1 | 27721-27723 | |
ORF7a | 110 | I110G | nonsyn | ATA | GGT | 1 | 1 | 1 | 27721-27723 |
Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
ORF7a | 110 | I110del | ATA | --- | 4438 | 4438 | All | 0.000849 |
ORF7a | 110 | I110T | aTa | aCa | 3275 | 3276 | All | 0.000626 |
ORF7a | 110 | I110T | aTA | aCC | 1 | 3276 | All | 0 |
ORF7a | 110 | I110T | aTa | aCa | 2412 | 2412 | AY.4 | 0.003754 |
ORF7a | 110 | I110del1 | Ata | -ta | 1303 | 1316 | All | 0.000249 |
ORF7a | 110 | I110del1 | atA | at- | 9 | 1316 | All | 0.000002 |
ORF7a | 110 | I110del1 | AtA | -tN | 2 | 1316 | All | 0 |
ORF7a | 110 | I110del1 | AtA | -tG | 1 | 1316 | All | 0 |
ORF7a | 110 | I110del1 | ATA | -NN | 1 | 1316 | All | 0 |
ORF7a | 110 | I110del | ATA | --- | 1260 | 1260 | B.1.1.7 | 0.001128 |
ORF7a | 110 | I110V | Ata | Gta | 970 | 971 | All | 0.000186 |
ORF7a | 110 | I110V | AtA | GtT | 1 | 971 | All | 0 |
ORF7a | 110 | I110del | ATA | --- | 511 | 511 | AY.4 | 0.000795 |
ORF7a | 110 | I110I | atA | atT | 389 | 412 | All | 0.000074 |
ORF7a | 110 | I110I | atA | atC | 23 | 412 | All | 0.000004 |
ORF7a | 110 | I110del1 | Ata | -ta | 394 | 394 | AY.4 | 0.000613 |
ORF7a | 110 | I110I | atA | atT | 344 | 344 | AY.101 | 0.16871 |
ORF7a | 110 | I110V | Ata | Gta | 314 | 314 | B.1.625 | 0.738824 |
ORF7a | 110 | I110del | ATA | --- | 269 | 269 | AY.25 | 0.001618 |
ORF7a | 110 | I110del | ATA | --- | 183 | 183 | AY.83 | 0.315517 |
ORF7a | 110 | I110V | Ata | Gta | 169 | 169 | AY.44 | 0.001029 |
ORF7a | 110 | I110del | ATA | --- | 156 | 156 | B.1.617.2 | 0.000587 |
ORF7a | 110 | I110del1 | Ata | -ta | 126 | 126 | B.1.1.7 | 0.000113 |
ORF7a | 110 | I110V | Ata | Gta | 115 | 115 | AY.3 | 0.001144 |
ORF7a | 110 | I110del | ATA | --- | 111 | 111 | AY.44 | 0.000676 |
ORF7a | 110 | I110del | ATA | --- | 109 | 109 | AY.103 | 0.000677 |
ORF7a | 110 | I110del | ATA | --- | 105 | 105 | AY.3 | 0.001044 |
ORF7a | 110 | I110del | ATA | --- | 104 | 104 | AY.29 | 0.00164 |
ORF7a | 110 | I110del | ATA | --- | 103 | 103 | AY.33 | 0.006878 |
ORF7a | 110 | I110T | aTa | aCa | 92 | 92 | B.1.1.7 | 0.000082 |
ORF7a | 110 | I110T | aTa | aCa | 87 | 87 | B.1.258.17 | 0.009046 |
ORF7a | 110 | I110del | ATA | --- | 84 | 84 | AY.43 | 0.000372 |
ORF7a | 110 | I110T | aTa | aCa | 83 | 83 | B.1.617.2 | 0.000313 |
ORF7a | 110 | I110L | Ata | Tta | 67 | 82 | All | 0.000013 |
ORF7a | 110 | I110L | Ata | Cta | 11 | 82 | All | 0.000002 |
ORF7a | 110 | I110L | AtA | CtC | 4 | 82 | All | 0.000001 |
ORF7a | 110 | I110del1 | Ata | -ta | 82 | 82 | AY.103 | 0.000509 |
ORF7a | 110 | I110del1 | Ata | -ta | 80 | 80 | B.1.617.2 | 0.000301 |
ORF7a | 110 | I110del | ATA | --- | 76 | 76 | B.1.36.18 | 0.031933 |
ORF7a | 110 | I110del1 | Ata | -ta | 70 | 72 | AY.25 | 0.000421 |
ORF7a | 110 | I110del1 | AtA | -tN | 1 | 72 | AY.25 | 0.000006 |
ORF7a | 110 | I110del1 | atA | at- | 1 | 72 | AY.25 | 0.000006 |
ORF7a | 110 | I110del | ATA | --- | 67 | 67 | AY.6 | 0.002756 |
ORF7a | 110 | I110T | aTa | aCa | 63 | 63 | B.1.1.226 | 0.366279 |
ORF7a | 110 | I110del1 | Ata | -ta | 62 | 62 | AY.44 | 0.000377 |
ORF7a | 110 | I110del | ATA | --- | 61 | 61 | P.1 | 0.000961 |
ORF7a | 110 | I110del | ATA | --- | 59 | 59 | AY.26 | 0.00167 |
ORF7a | 110 | I110V | Ata | Gta | 59 | 59 | AY.4 | 0.000092 |
ORF7a | 110 | I110del | ATA | --- | 58 | 58 | AY.46 | 0.006037 |
ORF7a | 110 | I110M | atA | atG | 55 | 55 | All | 0.000011 |
ORF7a | 110 | I110T | aTa | aCa | 55 | 55 | AY.46.4 | 0.009048 |
ORF7a | 110 | I110del | ATA | --- | 52 | 52 | AY.42 | 0.002092 |
ORF7a | 110 | I110del | ATA | --- | 52 | 52 | B.1.1.519 | 0.002065 |
ORF7a | 110 | I110T | aTa | aCa | 49 | 49 | C.35 | 0.037926 |
ORF7a | 110 | I110del | ATA | --- | 46 | 46 | B.1 | 0.000421 |
ORF7a | 110 | I110del | ATA | --- | 44 | 44 | B.1.2 | 0.000387 |
ORF7a | 110 | I110T | aTa | aCa | 42 | 42 | AY.43 | 0.000186 |
ORF7a | 110 | I110del1 | Ata | -ta | 38 | 38 | AY.5 | 0.000785 |
ORF7a | 110 | I110V | Ata | Gta | 38 | 38 | B.1.1.7 | 0.000034 |
ORF7a | 110 | I110del | ATA | --- | 38 | 38 | B.1.177 | 0.0005 |
ORF7a | 110 | I110del | ATA | --- | 37 | 37 | B.1.526 | 0.00087 |
ORF7a | 110 | I110del | ATA | --- | 34 | 34 | AY.74 | 0.003932 |
ORF7a | 110 | I110del1 | Ata | -ta | 33 | 33 | AY.43 | 0.000146 |
ORF7a | 110 | I110T | aTa | aCa | 33 | 33 | P.1 | 0.00052 |
ORF7a | 110 | I110del | ATA | --- | 32 | 32 | AY.7 | 0.006272 |
ORF7a | 110 | I110del | ATA | --- | 29 | 29 | AY.39 | 0.000717 |
ORF7a | 110 | I110V | Ata | Gta | 29 | 29 | B.1.617.2 | 0.000109 |
ORF7a | 110 | I110T | aTa | aCa | 27 | 27 | B.1.1.222 | 0.005508 |
ORF7a | 110 | I110del2 | aTA | a-- | 13 | 25 | All | 0.000002 |
ORF7a | 110 | I110del2 | ATa | --a | 11 | 25 | All | 0.000002 |
ORF7a | 110 | I110del2 | ATA | --N | 1 | 25 | All | 0 |
ORF7a | 110 | I110del | ATA | --- | 24 | 24 | AY.102 | 0.000636 |
ORF7a | 110 | I110del | ATA | --- | 24 | 24 | B.1.1 | 0.000435 |
ORF7a | 110 | I110M | atA | atG | 23 | 23 | B.1.1.7 | 0.000021 |
ORF7a | 110 | I110del1 | Ata | -ta | 22 | 23 | B.1.526 | 0.000517 |
ORF7a | 110 | I110del1 | AtA | -tG | 1 | 23 | B.1.526 | 0.000024 |
ORF7a | 110 | I110del1 | Ata | -ta | 21 | 22 | AY.3 | 0.000209 |
ORF7a | 110 | I110del1 | ATA | -NN | 1 | 22 | AY.3 | 0.00001 |
ORF7a | 110 | I110del2 | ATa | --a | 11 | 22 | B.1.1.7 | 0.00001 |
ORF7a | 110 | I110del2 | aTA | a-- | 11 | 22 | B.1.1.7 | 0.00001 |
ORF7a | 110 | I110T | aTa | aCa | 21 | 21 | AY.100 | 0.000966 |
ORF7a | 110 | I110del | ATA | --- | 21 | 21 | AY.53 | 0.006038 |
ORF7a | 110 | I110V | Ata | Gta | 21 | 21 | B.1 | 0.000192 |
ORF7a | 110 | I110del1 | Ata | -ta | 21 | 21 | B.1.2 | 0.000185 |
ORF7a | 110 | I110T | aTa | aCa | 20 | 20 | B.1 | 0.000183 |
ORF7a | 110 | I110T | aTa | aCa | 20 | 20 | B.1.1.519 | 0.000794 |
ORF7a | 110 | I110del | ATA | --- | 20 | 20 | B.1.370 | 0.16 |
ORF7a | 110 | I110V | Ata | Gta | 19 | 19 | AY.43 | 0.000084 |
ORF7a | 110 | I110del | ATA | --- | 19 | 19 | B.1.1.214 | 0.001054 |
ORF7a | 110 | I110V | Ata | Gta | 19 | 19 | B.1.36.36 | 0.011439 |
ORF7a | 110 | I110T | aTa | aCa | 18 | 18 | AY.102 | 0.000477 |
ORF7a | 110 | I110del | ATA | --- | 18 | 18 | AY.113 | 0.002563 |
ORF7a | 110 | I110del1 | Ata | -ta | 18 | 18 | AY.4.2 | 0.00039 |
ORF7a | 110 | I110del1 | Ata | -ta | 18 | 18 | AY.4.4 | 0.007365 |
ORF7a | 110 | I110del1 | Ata | -ta | 17 | 17 | AY.46.5 | 0.003373 |
ORF7a | 110 | I110del | ATA | --- | 17 | 17 | AY.47 | 0.000529 |
ORF7a | 110 | I110del1 | Ata | -ta | 17 | 17 | AY.98.1 | 0.000823 |
ORF7a | 110 | I110del | ATA | --- | 17 | 17 | B.1.427 | 0.000858 |
ORF7a | 110 | I110del | ATA | --- | 16 | 16 | AY.9 | 0.001082 |
ORF7a | 110 | I110V | Ata | Gta | 15 | 15 | AY.103 | 0.000093 |
ORF7a | 110 | I110V | Ata | Gta | 15 | 15 | B.1.1.333 | 0.016146 |
ORF7a | 110 | I110del | ATA | --- | 15 | 15 | B.1.234 | 0.001979 |
ORF7a | 110 | I110del | ATA | --- | 14 | 14 | AY.118 | 0.000877 |
ORF7a | 110 | I110del | ATA | --- | 14 | 14 | AY.121 | 0.001894 |
ORF7a | 110 | I110del1 | Ata | -ta | 14 | 14 | AY.47 | 0.000435 |
ORF7a | 110 | I110del | ATA | --- | 14 | 14 | B.1.1.37 | 0.0027 |
ORF7a | 110 | I110del1 | Ata | -ta | 13 | 13 | AY.113 | 0.001851 |
ORF7a | 110 | I110T | aTa | aCa | 13 | 13 | AY.3 | 0.000129 |
ORF7a | 110 | I110del | ATA | --- | 13 | 13 | AY.46.6 | 0.000939 |
ORF7a | 110 | I110del | ATA | --- | 13 | 13 | AY.5 | 0.000268 |
ORF7a | 110 | I110del | ATA | --- | 13 | 13 | AY.75 | 0.000728 |
ORF7a | 110 | I110L | Ata | Tta | 10 | 13 | B.1.1.7 | 0.000009 |
ORF7a | 110 | I110L | Ata | Cta | 3 | 13 | B.1.1.7 | 0.000003 |
ORF7a | 110 | I110T | aTa | aCa | 13 | 13 | B.1.2 | 0.000114 |
ORF7a | 110 | I110del | ATA | --- | 12 | 12 | AY.14 | 0.001056 |
ORF7a | 110 | I110del1 | Ata | -ta | 12 | 12 | AY.39 | 0.000297 |
ORF7a | 110 | I110del | ATA | --- | 12 | 12 | B.1.351 | 0.000357 |
ORF7a | 110 | I110M | atA | atG | 11 | 11 | AY.103 | 0.000068 |
ORF7a | 110 | I110del | ATA | --- | 11 | 11 | AY.120 | 0.000409 |
ORF7a | 110 | I110del1 | Ata | -ta | 11 | 11 | AY.120 | 0.000409 |
ORF7a | 110 | I110V | Ata | Gta | 11 | 11 | AY.39 | 0.000272 |
ORF7a | 110 | I110T | aTa | aCa | 11 | 11 | AY.44 | 0.000067 |
ORF7a | 110 | I110del | ATA | --- | 11 | 11 | D.2 | 0.000825 |
ORF7a | 110 | I110K | aTa | aAa | 10 | 10 | All | 0.000002 |
ORF7a | 110 | I110del | ATA | --- | 10 | 10 | AY.119 | 0.000353 |
ORF7a | 110 | I110T | aTa | aCa | 10 | 10 | AY.25 | 0.00006 |
ORF7a | 110 | I110V | Ata | Gta | 10 | 10 | AY.25 | 0.00006 |
ORF7a | 110 | I110del1 | Ata | -ta | 10 | 10 | AY.46 | 0.001041 |
ORF7a | 110 | I110T | aTa | aCa | 10 | 10 | AY.9.2 | 0.000367 |
ORF7a | 110 | I110del | ATA | --- | 10 | 10 | B.1.429 | 0.000235 |
ORF7a | 110 | I110del1 | Ata | -ta | 10 | 10 | P.1 | 0.000158 |
ORF7a | 110 | I110del1 | Ata | -ta | 9 | 9 | AY.119 | 0.000318 |
ORF7a | 110 | I110del1 | Ata | -ta | 9 | 9 | AY.26 | 0.000255 |
ORF7a | 110 | I110V | Ata | Gta | 9 | 9 | AY.29 | 0.000142 |
ORF7a | 110 | I110del | ATA | --- | 9 | 9 | AY.54 | 0.000858 |
ORF7a | 110 | I110T | aTa | aCa | 9 | 9 | B.1.177 | 0.000119 |
ORF7a | 110 | I110del1 | Ata | -ta | 8 | 8 | AY.102 | 0.000212 |
ORF7a | 110 | I110T | aTa | aCa | 8 | 8 | AY.103 | 0.00005 |
ORF7a | 110 | I110del | ATA | --- | 8 | 8 | AY.105 | 0.005145 |
ORF7a | 110 | I110del | ATA | --- | 8 | 8 | AY.117 | 0.000676 |
ORF7a | 110 | I110del1 | Ata | -ta | 7 | 8 | AY.120.1 | 0.002247 |
ORF7a | 110 | I110del1 | atA | at- | 1 | 8 | AY.120.1 | 0.000321 |
ORF7a | 110 | I110V | Ata | Gta | 8 | 8 | AY.23 | 0.000558 |
ORF7a | 110 | I110del | ATA | --- | 8 | 8 | AY.4.2 | 0.000174 |
ORF7a | 110 | I110V | Ata | Gta | 8 | 8 | AY.46.6 | 0.000578 |
ORF7a | 110 | I110del | ATA | --- | 8 | 8 | AY.7.2 | 0.004474 |
ORF7a | 110 | I110del | ATA | --- | 8 | 8 | AY.91 | 0.005844 |
ORF7a | 110 | I110T | aTa | aCa | 8 | 8 | AY.99.1 | 0.012422 |
ORF7a | 110 | I110L | Ata | Tta | 8 | 8 | B.1 | 0.000073 |
ORF7a | 110 | I110del | ATA | --- | 8 | 8 | B.1.1.284 | 0.000859 |
ORF7a | 110 | I110del | ATA | --- | 8 | 8 | B.1.160 | 0.00025 |
ORF7a | 110 | I110del | ATA | --- | 8 | 8 | B.1.621 | 0.000708 |
ORF7a | 110 | I110del1 | Ata | -ta | 7 | 7 | AY.29 | 0.00011 |
ORF7a | 110 | I110L | Ata | Tta | 7 | 7 | AY.39.1 | 0.000277 |
ORF7a | 110 | I110T | aTa | aCa | 7 | 7 | AY.42 | 0.000282 |
ORF7a | 110 | I110V | Ata | Gta | 7 | 7 | B.1.575 | 0.002124 |
ORF7a | 110 | I110I | atA | atT | 7 | 7 | B.1.617.2 | 0.000026 |
ORF7a | 110 | I110del1 | Ata | -ta | 7 | 7 | B.1.637 | 0.000512 |
ORF7a | 110 | I110L | Ata | Cta | 2 | 6 | 0.111111 | |
ORF7a | 110 | I110L | Ata | Tta | 2 | 6 | 0.111111 | |
ORF7a | 110 | I110L | AtA | CtC | 2 | 6 | 0.111111 | |
ORF7a | 110 | I110R | aTa | aGa | 6 | 6 | All | 0.000001 |
ORF7a | 110 | I110V | Ata | Gta | 6 | 6 | AY.10 | 0.00318 |
ORF7a | 110 | I110del1 | Ata | -ta | 6 | 6 | AY.20 | 0.000233 |
ORF7a | 110 | I110I | atA | atT | 6 | 6 | AY.4 | 0.000009 |
ORF7a | 110 | I110T | aTa | aCa | 6 | 6 | B.1.429 | 0.000141 |
ORF7a | 110 | I110T | aTa | aCa | 6 | 6 | B.1.617.1 | 0.000774 |
ORF7a | 110 | I110T | aTa | aCa | 6 | 6 | B.1.637 | 0.000438 |
ORF7a | 110 | I110del | ATA | --- | 6 | 6 | C.37 | 0.000696 |
ORF7a | 110 | I110I | atA | atT | 3 | 5 | 0.166667 | |
ORF7a | 110 | I110I | atA | atC | 2 | 5 | 0.111111 | |
ORF7a | 110 | I110del | ATA | --- | 5 | 5 | AY.100 | 0.00023 |
ORF7a | 110 | I110T | aTa | aCa | 5 | 5 | AY.20 | 0.000194 |
ORF7a | 110 | I110del1 | Ata | -ta | 5 | 5 | AY.3.1 | 0.000426 |
ORF7a | 110 | I110del | ATA | --- | 5 | 5 | AY.3.1 | 0.000426 |
ORF7a | 110 | I110T | aTa | aCa | 5 | 5 | AY.33 | 0.000334 |
ORF7a | 110 | I110del1 | Ata | -ta | 5 | 5 | AY.39.1 | 0.000198 |
ORF7a | 110 | I110del | ATA | --- | 5 | 5 | AY.45 | 0.000608 |
ORF7a | 110 | I110T | aTa | aCa | 5 | 5 | AY.47 | 0.000156 |
ORF7a | 110 | I110T | aTa | aCa | 5 | 5 | AY.5 | 0.000103 |
ORF7a | 110 | I110del | ATA | --- | 5 | 5 | AY.70 | 0.001043 |
ORF7a | 110 | I110del | ATA | --- | 5 | 5 | AY.79 | 0.006053 |
ORF7a | 110 | I110del | ATA | --- | 5 | 5 | AY.98.1 | 0.000242 |
ORF7a | 110 | I110del | ATA | --- | 5 | 5 | B.1.1.318 | 0.001509 |
ORF7a | 110 | I110del1 | Ata | -ta | 5 | 5 | B.1.1.373 | 0.119048 |
ORF7a | 110 | I110V | Ata | Gta | 5 | 5 | B.1.128 | 0.003177 |
ORF7a | 110 | I110del | ATA | --- | 5 | 5 | B.1.243 | 0.000348 |
ORF7a | 110 | I110V | Ata | Gta | 5 | 5 | B.1.258 | 0.000333 |
ORF7a | 110 | I110del | ATA | --- | 5 | 5 | B.1.258.17 | 0.00052 |
ORF7a | 110 | I110T | aTa | aCa | 5 | 5 | B.1.351 | 0.000149 |
ORF7a | 110 | I110del | ATA | --- | 5 | 5 | P.1.7 | 0.001596 |
ORF7a | 110 | I110del | ATA | --- | 5 | 5 | P.2 | 0.000933 |
ORF7a | 110 | I110T | aTa | aCa | 4 | 4 | A.1 | 0.001127 |
ORF7a | 110 | I110del | ATA | --- | 4 | 4 | AY.116 | 0.001147 |
ORF7a | 110 | I110del1 | Ata | -ta | 4 | 4 | AY.118 | 0.000251 |
ORF7a | 110 | I110del | ATA | --- | 4 | 4 | AY.120.1 | 0.001284 |
ORF7a | 110 | I110T | aTa | aCa | 4 | 4 | AY.121 | 0.000541 |
ORF7a | 110 | I110del | ATA | --- | 4 | 4 | AY.23 | 0.000279 |
ORF7a | 110 | I110del1 | Ata | -ta | 4 | 4 | AY.23.1 | 0.001669 |
ORF7a | 110 | I110del | ATA | --- | 4 | 4 | AY.27 | 0.000259 |
ORF7a | 110 | I110del1 | Ata | -ta | 4 | 4 | AY.35 | 0.000932 |
ORF7a | 110 | I110L | Ata | Tta | 4 | 4 | AY.4 | 0.000006 |
ORF7a | 110 | I110T | aTa | aCa | 4 | 4 | AY.4.3 | 0.003367 |
ORF7a | 110 | I110del | ATA | --- | 4 | 4 | AY.4.5 | 0.00043 |
ORF7a | 110 | I110I | atA | atT | 2 | 4 | AY.43 | 0.000009 |
ORF7a | 110 | I110I | atA | atC | 2 | 4 | AY.43 | 0.000009 |
ORF7a | 110 | I110L | Ata | Tta | 4 | 4 | AY.44 | 0.000024 |
ORF7a | 110 | I110del1 | Ata | -ta | 4 | 4 | AY.46.6 | 0.000289 |
ORF7a | 110 | I110V | Ata | Gta | 4 | 4 | AY.6 | 0.000165 |
ORF7a | 110 | I110del1 | Ata | -ta | 3 | 4 | AY.6 | 0.000123 |
ORF7a | 110 | I110del1 | AtA | -tN | 1 | 4 | AY.6 | 0.000041 |
ORF7a | 110 | I110del | ATA | --- | 4 | 4 | AY.60 | 0.003752 |
ORF7a | 110 | I110del | ATA | --- | 4 | 4 | AY.8 | 0.002424 |
ORF7a | 110 | I110del | ATA | --- | 4 | 4 | AY.9.1 | 0.000335 |
ORF7a | 110 | I110del1 | Ata | -ta | 4 | 4 | AY.92 | 0.001149 |
ORF7a | 110 | I110del1 | Ata | -ta | 4 | 4 | AY.99.2 | 0.000369 |
ORF7a | 110 | I110del1 | Ata | -ta | 4 | 4 | B.1 | 0.000037 |
ORF7a | 110 | I110T | aTa | aCa | 4 | 4 | B.1.1 | 0.000073 |
ORF7a | 110 | I110I | atA | atC | 2 | 4 | B.1.1 | 0.000036 |
ORF7a | 110 | I110I | atA | atT | 2 | 4 | B.1.1 | 0.000036 |
ORF7a | 110 | I110del1 | Ata | -ta | 4 | 4 | B.1.177 | 0.000053 |
ORF7a | 110 | I110V | Ata | Gta | 4 | 4 | B.1.177 | 0.000053 |
ORF7a | 110 | I110del | ATA | --- | 4 | 4 | B.1.177.7 | 0.000659 |
ORF7a | 110 | I110del1 | Ata | -ta | 4 | 4 | B.1.234 | 0.000528 |
ORF7a | 110 | I110del1 | Ata | -ta | 4 | 4 | B.1.525 | 0.000453 |
ORF7a | 110 | I110T | aTa | aCa | 4 | 4 | B.1.526 | 0.000094 |
ORF7a | 110 | I110del | ATA | --- | 4 | 4 | B.1.575 | 0.001214 |
ORF7a | 110 | I110del | ATA | --- | 4 | 4 | B.1.595 | 0.001044 |
ORF7a | 110 | I110del | ATA | --- | 4 | 4 | B.1.596 | 0.000349 |
ORF7a | 110 | I110del | ATA | --- | 4 | 4 | B.1.621.1 | 0.002023 |
ORF7a | 110 | I110del | ATA | --- | 4 | 4 | B.1.628 | 0.001409 |
ORF7a | 110 | I110V | Ata | Gta | 4 | 4 | C.36.3.1 | 0.01087 |
ORF7a | 110 | I110del | ATA | --- | 4 | 4 | N.7 | 0.117647 |
ORF7a | 110 | I110V | Ata | Gta | 4 | 4 | P.1 | 0.000063 |
ORF7a | 110 | I110del | ATA | --- | 4 | 4 | P.1.14 | 0.000191 |
ORF7a | 110 | I110del | ATA | --- | 4 | 4 | P.1.15 | 0.000929 |
ORF7a | 110 | I110del | ATA | --- | 4 | 4 | Q.8 | 0.00066 |
ORF7a | 110 | I110K | aTa | aAa | 3 | 3 | 0.166667 | |
ORF7a | 110 | I110N | aTA | aAC | 2 | 3 | 0.111111 | |
ORF7a | 110 | I110N | aTA | aAT | 1 | 3 | 0.055556 | |
ORF7a | 110 | I110F | AtA | TtT | 3 | 3 | All | 0.000001 |
ORF7a | 110 | I110N | aTA | aAC | 2 | 3 | All | 0 |
ORF7a | 110 | I110N | aTA | aAT | 1 | 3 | All | 0 |
ORF7a | 110 | I110del1 | Ata | -ta | 3 | 3 | AY.100 | 0.000138 |
ORF7a | 110 | I110V | Ata | Gta | 3 | 3 | AY.102 | 0.00008 |
ORF7a | 110 | I110del1 | Ata | -ta | 3 | 3 | AY.105 | 0.001929 |
ORF7a | 110 | I110del1 | Ata | -ta | 3 | 3 | AY.114 | 0.000693 |
ORF7a | 110 | I110T | aTa | aCa | 3 | 3 | AY.118 | 0.000188 |
ORF7a | 110 | I110T | aTa | aCa | 3 | 3 | AY.120 | 0.000112 |
ORF7a | 110 | I110del | ATA | --- | 3 | 3 | AY.13 | 0.000483 |
ORF7a | 110 | I110del | ATA | --- | 3 | 3 | AY.20 | 0.000117 |
ORF7a | 110 | I110del | ATA | --- | 3 | 3 | AY.24 | 0.001293 |
ORF7a | 110 | I110T | aTa | aCa | 3 | 3 | AY.29 | 0.000047 |
ORF7a | 110 | I110L | Ata | Tta | 3 | 3 | AY.3 | 0.00003 |
ORF7a | 110 | I110del | ATA | --- | 3 | 3 | AY.36 | 0.000445 |
ORF7a | 110 | I110T | aTa | aCa | 3 | 3 | AY.39.1 | 0.000119 |
ORF7a | 110 | I110del1 | Ata | -ta | 3 | 3 | AY.4.2.1 | 0.000447 |
ORF7a | 110 | I110del1 | Ata | -ta | 3 | 3 | AY.42 | 0.000121 |
ORF7a | 110 | I110M | atA | atG | 3 | 3 | AY.43 | 0.000013 |
ORF7a | 110 | I110L | Ata | Tta | 2 | 3 | AY.43 | 0.000009 |
ORF7a | 110 | I110L | Ata | Cta | 1 | 3 | AY.43 | 0.000004 |
ORF7a | 110 | I110del1 | Ata | -ta | 3 | 3 | AY.45 | 0.000365 |
ORF7a | 110 | I110V | Ata | Gta | 3 | 3 | AY.45 | 0.000365 |
ORF7a | 110 | I110V | Ata | Gta | 3 | 3 | AY.46.4 | 0.000494 |
ORF7a | 110 | I110V | Ata | Gta | 3 | 3 | AY.47 | 0.000093 |
ORF7a | 110 | I110del | ATA | --- | 3 | 3 | AY.5.3 | 0.001012 |
ORF7a | 110 | I110del | ATA | --- | 3 | 3 | AY.58 | 0.002722 |
ORF7a | 110 | I110del | ATA | --- | 3 | 3 | AY.69 | 0.00056 |
ORF7a | 110 | I110del | ATA | --- | 3 | 3 | AY.72 | 0.004082 |
ORF7a | 110 | I110del | ATA | --- | 3 | 3 | AY.75.1 | 0.000541 |
ORF7a | 110 | I110del1 | Ata | -ta | 3 | 3 | AY.9 | 0.000203 |
ORF7a | 110 | I110del | ATA | --- | 3 | 3 | AY.99.2 | 0.000276 |
ORF7a | 110 | I110I | atA | atT | 2 | 3 | B.1 | 0.000018 |
ORF7a | 110 | I110I | atA | atC | 1 | 3 | B.1 | 0.000009 |
ORF7a | 110 | I110del1 | atA | at- | 3 | 3 | B.1.1.1 | 0.00098 |
ORF7a | 110 | I110del1 | Ata | -ta | 3 | 3 | B.1.1.214 | 0.000166 |
ORF7a | 110 | I110T | aTa | aCa | 3 | 3 | B.1.1.214 | 0.000166 |
ORF7a | 110 | I110T | aTa | aCa | 3 | 3 | B.1.1.25 | 0.001706 |
ORF7a | 110 | I110I | atA | atC | 3 | 3 | B.1.1.311 | 0.001074 |
ORF7a | 110 | I110del | ATA | --- | 3 | 3 | B.1.1.58 | 0.016129 |
ORF7a | 110 | I110R | aTa | aGa | 3 | 3 | B.1.1.7 | 0.000003 |
ORF7a | 110 | I110I | atA | atT | 2 | 3 | B.1.1.7 | 0.000002 |
ORF7a | 110 | I110I | atA | atC | 1 | 3 | B.1.1.7 | 0.000001 |
ORF7a | 110 | I110del1 | Ata | -ta | 3 | 3 | B.1.110.3 | 0.002155 |
ORF7a | 110 | I110del | ATA | --- | 3 | 3 | B.1.13 | 0.007126 |
ORF7a | 110 | I110T | aTa | aCa | 3 | 3 | B.1.177.60 | 0.000655 |
ORF7a | 110 | I110I | atA | atT | 3 | 3 | B.1.206 | 0.002447 |
ORF7a | 110 | I110del1 | Ata | -ta | 3 | 3 | B.1.243 | 0.000209 |
ORF7a | 110 | I110del | ATA | --- | 3 | 3 | B.1.351.2 | 0.000908 |
ORF7a | 110 | I110del | ATA | --- | 3 | 3 | B.1.36 | 0.000438 |
ORF7a | 110 | I110T | aTa | aCa | 3 | 3 | B.1.36.29 | 0.001552 |
ORF7a | 110 | I110del | ATA | --- | 3 | 3 | B.1.389 | 0.003006 |
ORF7a | 110 | I110V | Ata | Gta | 3 | 3 | B.1.438.1 | 0.000322 |
ORF7a | 110 | I110del | ATA | --- | 3 | 3 | B.1.525 | 0.000339 |
ORF7a | 110 | I110L | Ata | Tta | 3 | 3 | B.1.596 | 0.000261 |
ORF7a | 110 | I110del | ATA | --- | 3 | 3 | B.1.617.1 | 0.000387 |
ORF7a | 110 | I110V | Ata | Gta | 3 | 3 | B.1.621 | 0.000266 |
ORF7a | 110 | I110del1 | Ata | -ta | 3 | 3 | B.1.621 | 0.000266 |
ORF7a | 110 | I110del | ATA | --- | 3 | 3 | B.1.626 | 0.017143 |
ORF7a | 110 | I110T | aTa | aCa | 3 | 3 | C.37 | 0.000348 |
ORF7a | 110 | I110del1 | Ata | -ta | 3 | 3 | D.2 | 0.000225 |
ORF7a | 110 | I110del1 | atA | at- | 3 | 3 | P.1.14 | 0.000143 |
ORF7a | 110 | I110del | ATA | --- | 3 | 3 | Q.3 | 0.000435 |
ORF7a | 110 | I110del | ATA | --- | 3 | 3 | R.1 | 0.00027 |
ORF7a | 110 | I110F | AtA | TtT | 2 | 2 | 0.111111 | |
ORF7a | 110 | I110Q | ATa | CAa | 2 | 2 | 0.111111 | |
ORF7a | 110 | I110del | ATA | --- | 2 | 2 | 0.111111 | |
ORF7a | 110 | I110H | ATA | CAC | 2 | 2 | 0.111111 | |
ORF7a | 110 | I110del | ATA | --- | 2 | 2 | A.2.5 | 0.000998 |
ORF7a | 110 | I110del | ATA | --- | 2 | 2 | A.28 | 0.005291 |
ORF7a | 110 | I110del1 | Ata | -ta | 2 | 2 | A.29 | 0.010638 |
ORF7a | 110 | I110X | ATa | TAa | 2 | 2 | All | 0 |
ORF7a | 110 | I110A | ATa | GCa | 2 | 2 | All | 0 |
ORF7a | 110 | I110D | ATA | GAT | 2 | 2 | All | 0 |
ORF7a | 110 | I110Q | ATa | CAa | 2 | 2 | All | 0 |
ORF7a | 110 | I110H | ATA | CAC | 2 | 2 | All | 0 |
ORF7a | 110 | I110L | Ata | Tta | 2 | 2 | AY.102 | 0.000053 |
ORF7a | 110 | I110I | atA | atT | 2 | 2 | AY.106 | 0.00067 |
ORF7a | 110 | I110del | ATA | --- | 2 | 2 | AY.108 | 0.002205 |
ORF7a | 110 | I110V | Ata | Gta | 2 | 2 | AY.109 | 0.001479 |
ORF7a | 110 | I110del1 | Ata | -ta | 2 | 2 | AY.110 | 0.000225 |
ORF7a | 110 | I110del | ATA | --- | 2 | 2 | AY.110 | 0.000225 |
ORF7a | 110 | I110L | Ata | Tta | 2 | 2 | AY.118 | 0.000125 |
ORF7a | 110 | I110T | aTa | aCa | 2 | 2 | AY.119 | 0.000071 |
ORF7a | 110 | I110del | ATA | --- | 2 | 2 | AY.12 | 0.000632 |
ORF7a | 110 | I110del1 | Ata | -ta | 2 | 2 | AY.14 | 0.000176 |
ORF7a | 110 | I110del | ATA | --- | 2 | 2 | AY.16.1 | 0.00094 |
ORF7a | 110 | I110L | Ata | Tta | 2 | 2 | AY.25 | 0.000012 |
ORF7a | 110 | I110I | atA | atC | 2 | 2 | AY.25 | 0.000012 |
ORF7a | 110 | I110R | aTa | aGa | 2 | 2 | AY.25 | 0.000012 |
ORF7a | 110 | I110del | ATA | --- | 2 | 2 | AY.30 | 0.000791 |
ORF7a | 110 | I110del1 | Ata | -ta | 2 | 2 | AY.33 | 0.000134 |
ORF7a | 110 | I110del | ATA | --- | 2 | 2 | AY.34 | 0.000194 |
ORF7a | 110 | I110del1 | Ata | -ta | 2 | 2 | AY.34 | 0.000194 |
ORF7a | 110 | I110del | ATA | --- | 2 | 2 | AY.38 | 0.000999 |
ORF7a | 110 | I110D | ATA | GAT | 2 | 2 | AY.4 | 0.000003 |
ORF7a | 110 | I110V | Ata | Gta | 2 | 2 | AY.4.2 | 0.000043 |
ORF7a | 110 | I110T | aTa | aCa | 2 | 2 | AY.46 | 0.000208 |
ORF7a | 110 | I110del1 | Ata | -ta | 2 | 2 | AY.46.4 | 0.000329 |
ORF7a | 110 | I110del | ATA | --- | 2 | 2 | AY.46.5 | 0.000397 |
ORF7a | 110 | I110V | Ata | Gta | 2 | 2 | AY.53 | 0.000575 |
ORF7a | 110 | I110K | aTa | aAa | 2 | 2 | AY.53 | 0.000575 |
ORF7a | 110 | I110del | ATA | --- | 2 | 2 | AY.55 | 0.001835 |
ORF7a | 110 | I110del | ATA | --- | 2 | 2 | AY.61 | 0.00021 |
ORF7a | 110 | I110T | aTa | aCa | 2 | 2 | AY.62 | 0.000871 |
ORF7a | 110 | I110del | ATA | --- | 2 | 2 | AY.62 | 0.000871 |
ORF7a | 110 | I110del | ATA | --- | 2 | 2 | AY.68 | 0.000547 |
ORF7a | 110 | I110T | aTa | aCa | 2 | 2 | AY.69 | 0.000373 |
ORF7a | 110 | I110del | ATA | --- | 2 | 2 | AY.7.1 | 0.000225 |
ORF7a | 110 | I110del1 | Ata | -ta | 2 | 2 | AY.75 | 0.000112 |
ORF7a | 110 | I110T | aTa | aCa | 2 | 2 | AY.75.1 | 0.000361 |
ORF7a | 110 | I110del | ATA | --- | 2 | 2 | AY.77 | 0.002255 |
ORF7a | 110 | I110T | aTa | aCa | 2 | 2 | AY.77 | 0.002255 |
ORF7a | 110 | I110del | ATA | --- | 2 | 2 | AY.85 | 0.000854 |
ORF7a | 110 | I110del | ATA | --- | 2 | 2 | AY.9.2 | 0.000073 |
ORF7a | 110 | I110del1 | Ata | -ta | 2 | 2 | AY.95 | 0.001522 |
ORF7a | 110 | I110L | Ata | Tta | 2 | 2 | B | 0.000256 |
ORF7a | 110 | I110L | AtA | CtC | 2 | 2 | B.1.1 | 0.000036 |
ORF7a | 110 | I110V | Ata | Gta | 2 | 2 | B.1.1 | 0.000036 |
ORF7a | 110 | I110del | ATA | --- | 2 | 2 | B.1.1.155 | 0.142857 |
ORF7a | 110 | I110V | Ata | Gta | 2 | 2 | B.1.1.269 | 0.002706 |
ORF7a | 110 | I110del | ATA | --- | 2 | 2 | B.1.1.317 | 0.000823 |
ORF7a | 110 | I110del | ATA | --- | 2 | 2 | B.1.1.33 | 0.000842 |
ORF7a | 110 | I110T | aTa | aCa | 2 | 2 | B.1.1.397 | 0.004505 |
ORF7a | 110 | I110del | ATA | --- | 2 | 2 | B.1.1.411 | 0.029412 |
ORF7a | 110 | I110del1 | Ata | -ta | 2 | 2 | B.1.1.449 | 0.045455 |
ORF7a | 110 | I110del1 | Ata | -ta | 2 | 2 | B.1.1.519 | 0.000079 |
ORF7a | 110 | I110T | aTa | aCa | 2 | 2 | B.1.160.8 | 0.002577 |
ORF7a | 110 | I110del | ATA | --- | 2 | 2 | B.1.177.57 | 0.000562 |
ORF7a | 110 | I110del | ATA | --- | 2 | 2 | B.1.177.60 | 0.000437 |
ORF7a | 110 | I110del | ATA | --- | 2 | 2 | B.1.177.86 | 0.000367 |
ORF7a | 110 | I110M | atA | atG | 2 | 2 | B.1.2 | 0.000018 |
ORF7a | 110 | I110del | ATA | --- | 2 | 2 | B.1.221 | 0.000142 |
ORF7a | 110 | I110V | Ata | Gta | 2 | 2 | B.1.239 | 0.002442 |
ORF7a | 110 | I110T | aTa | aCa | 2 | 2 | B.1.243 | 0.000139 |
ORF7a | 110 | I110del | ATA | --- | 2 | 2 | B.1.258 | 0.000133 |
ORF7a | 110 | I110del | ATA | --- | 2 | 2 | B.1.258.11 | 0.000793 |
ORF7a | 110 | I110del | ATA | --- | 2 | 2 | B.1.311 | 0.000549 |
ORF7a | 110 | I110del | ATA | --- | 2 | 2 | B.1.350 | 0.005865 |
ORF7a | 110 | I110del1 | Ata | -ta | 2 | 2 | B.1.351 | 0.000059 |
ORF7a | 110 | I110T | aTa | aCa | 2 | 2 | B.1.36 | 0.000292 |
ORF7a | 110 | I110V | Ata | Gta | 2 | 2 | B.1.36 | 0.000292 |
ORF7a | 110 | I110I | atA | atC | 2 | 2 | B.1.36.1 | 0.002281 |
ORF7a | 110 | I110T | aTa | aCa | 2 | 2 | B.1.36.22 | 0.002415 |
ORF7a | 110 | I110del | ATA | --- | 2 | 2 | B.1.36.29 | 0.001035 |
ORF7a | 110 | I110T | aTa | aCa | 2 | 2 | B.1.36.31 | 0.003503 |
ORF7a | 110 | I110T | aTa | aCa | 2 | 2 | B.1.361 | 0.002577 |
ORF7a | 110 | I110V | Ata | Gta | 2 | 2 | B.1.429 | 0.000047 |
ORF7a | 110 | I110T | aTa | aCa | 2 | 2 | B.1.466.2 | 0.000782 |
ORF7a | 110 | I110del1 | Ata | -ta | 2 | 2 | B.1.509 | 0.001732 |
ORF7a | 110 | I110del | ATA | --- | 2 | 2 | B.1.612 | 0.005305 |
ORF7a | 110 | I110I | atA | atT | 2 | 2 | B.1.617.1 | 0.000258 |
ORF7a | 110 | I110del | ATA | --- | 2 | 2 | B.1.637 | 0.000146 |
ORF7a | 110 | I110del1 | Ata | -ta | 2 | 2 | C.37 | 0.000232 |
ORF7a | 110 | I110del | ATA | --- | 2 | 2 | P.1.1 | 0.000635 |
ORF7a | 110 | I110del | ATA | --- | 2 | 2 | P.1.10 | 0.000539 |
ORF7a | 110 | I110del1 | Ata | -ta | 2 | 2 | P.1.10 | 0.000539 |
ORF7a | 110 | I110T | aTa | aCa | 2 | 2 | P.1.14 | 0.000096 |
ORF7a | 110 | I110V | Ata | Gta | 2 | 2 | P.2 | 0.000373 |
ORF7a | 110 | I110del | ATA | --- | 2 | 2 | Q.4 | 0.00091 |
ORF7a | 110 | I110Y | ATA | TAT | 1 | 1 | 0.055556 | |
ORF7a | 110 | I110X | ATa | TAa | 1 | 1 | 0.055556 | |
ORF7a | 110 | I110del | ATA | --- | 1 | 1 | A | 0.000387 |
ORF7a | 110 | I110del | ATA | --- | 1 | 1 | A.1 | 0.000282 |
ORF7a | 110 | I110del | ATA | --- | 1 | 1 | A.2.2 | 0.001689 |
ORF7a | 110 | I110del | ATA | --- | 1 | 1 | A.23 | 0.010526 |
ORF7a | 110 | I110T | aTA | aCC | 1 | 1 | A.27 | 0.001656 |
ORF7a | 110 | I110L | Ata | Tta | 1 | 1 | AE.8 | 0.000489 |
ORF7a | 110 | I110del | ATA | --- | 1 | 1 | AH.3 | 0.003802 |
ORF7a | 110 | I110G | ATA | GGT | 1 | 1 | All | 0 |
ORF7a | 110 | I110S | ATA | TCG | 1 | 1 | All | 0 |
ORF7a | 110 | I110Y | ATA | TAT | 1 | 1 | All | 0 |
ORF7a | 110 | I110T | aTa | aCa | 1 | 1 | AM.4 | 0.003571 |
ORF7a | 110 | I110del | ATA | --- | 1 | 1 | AY.10 | 0.00053 |
ORF7a | 110 | I110V | Ata | Gta | 1 | 1 | AY.100 | 0.000046 |
ORF7a | 110 | I110del | ATA | --- | 1 | 1 | AY.101 | 0.00049 |
ORF7a | 110 | I110del1 | Ata | -ta | 1 | 1 | AY.101 | 0.00049 |
ORF7a | 110 | I110I | atA | atT | 1 | 1 | AY.102 | 0.000027 |
ORF7a | 110 | I110K | aTa | aAa | 1 | 1 | AY.102 | 0.000027 |
ORF7a | 110 | I110del2 | aTA | a-- | 1 | 1 | AY.103 | 0.000006 |
ORF7a | 110 | I110T | aTa | aCa | 1 | 1 | AY.107 | 0.000466 |
ORF7a | 110 | I110del1 | Ata | -ta | 1 | 1 | AY.107 | 0.000466 |
ORF7a | 110 | I110del | ATA | --- | 1 | 1 | AY.109 | 0.00074 |
ORF7a | 110 | I110V | Ata | Gta | 1 | 1 | AY.11 | 0.001339 |
ORF7a | 110 | I110del1 | Ata | -ta | 1 | 1 | AY.11 | 0.001339 |
ORF7a | 110 | I110del1 | Ata | -ta | 1 | 1 | AY.111 | 0.000183 |
ORF7a | 110 | I110T | aTa | aCa | 1 | 1 | AY.113 | 0.000142 |
ORF7a | 110 | I110T | aTa | aCa | 1 | 1 | AY.116 | 0.000287 |
ORF7a | 110 | I110I | atA | atT | 1 | 1 | AY.117 | 0.000085 |
ORF7a | 110 | I110M | atA | atG | 1 | 1 | AY.119 | 0.000035 |
ORF7a | 110 | I110V | Ata | Gta | 1 | 1 | AY.120 | 0.000037 |
ORF7a | 110 | I110del | ATA | --- | 1 | 1 | AY.120.2.1 | 0.000498 |
ORF7a | 110 | I110del1 | Ata | -ta | 1 | 1 | AY.15 | 0.002222 |
ORF7a | 110 | I110del | ATA | --- | 1 | 1 | AY.16 | 0.00038 |
ORF7a | 110 | I110del1 | Ata | -ta | 1 | 1 | AY.19 | 0.00114 |
ORF7a | 110 | I110del | ATA | --- | 1 | 1 | AY.19 | 0.00114 |
ORF7a | 110 | I110V | Ata | Gta | 1 | 1 | AY.20 | 0.000039 |
ORF7a | 110 | I110M | atA | atG | 1 | 1 | AY.20 | 0.000039 |
ORF7a | 110 | I110del | ATA | --- | 1 | 1 | AY.21 | 0.001898 |
ORF7a | 110 | I110del1 | Ata | -ta | 1 | 1 | AY.23 | 0.00007 |
ORF7a | 110 | I110I | atA | atT | 1 | 1 | AY.23 | 0.00007 |
ORF7a | 110 | I110T | aTa | aCa | 1 | 1 | AY.24 | 0.000431 |
ORF7a | 110 | I110L | Ata | Cta | 1 | 1 | AY.24 | 0.000431 |
ORF7a | 110 | I110del2 | aTA | a-- | 1 | 1 | AY.25 | 0.000006 |
ORF7a | 110 | I110L | Ata | Cta | 1 | 1 | AY.26 | 0.000028 |
ORF7a | 110 | I110M | atA | atG | 1 | 1 | AY.26 | 0.000028 |
ORF7a | 110 | I110I | atA | atT | 1 | 1 | AY.27 | 0.000065 |
ORF7a | 110 | I110del | ATA | --- | 1 | 1 | AY.28 | 0.00189 |
ORF7a | 110 | I110del | ATA | --- | 1 | 1 | AY.29.1 | 0.000221 |
ORF7a | 110 | I110A | ATa | GCa | 1 | 1 | AY.3 | 0.00001 |
ORF7a | 110 | I110M | atA | atG | 1 | 1 | AY.3 | 0.00001 |
ORF7a | 110 | I110T | aTa | aCa | 1 | 1 | AY.3.1 | 0.000085 |
ORF7a | 110 | I110T | aTa | aCa | 1 | 1 | AY.30 | 0.000396 |
ORF7a | 110 | I110I | atA | atT | 1 | 1 | AY.30 | 0.000396 |
ORF7a | 110 | I110I | atA | atT | 1 | 1 | AY.32 | 0.000532 |
ORF7a | 110 | I110del | ATA | --- | 1 | 1 | AY.35 | 0.000233 |
ORF7a | 110 | I110I | atA | atT | 1 | 1 | AY.36 | 0.000148 |
ORF7a | 110 | I110del1 | Ata | -ta | 1 | 1 | AY.36 | 0.000148 |
ORF7a | 110 | I110L | Ata | Cta | 1 | 1 | AY.39 | 0.000025 |
ORF7a | 110 | I110T | aTa | aCa | 1 | 1 | AY.39 | 0.000025 |
ORF7a | 110 | I110V | Ata | Gta | 1 | 1 | AY.39.1 | 0.00004 |
ORF7a | 110 | I110del | ATA | --- | 1 | 1 | AY.39.1 | 0.00004 |
ORF7a | 110 | I110del1 | Ata | -ta | 1 | 1 | AY.39.1.1 | 0.000725 |
ORF7a | 110 | I110M | atA | atG | 1 | 1 | AY.4 | 0.000002 |
ORF7a | 110 | I110del1 | Ata | -ta | 1 | 1 | AY.4.1 | 0.000737 |
ORF7a | 110 | I110T | aTa | aCa | 1 | 1 | AY.4.2.1 | 0.000149 |
ORF7a | 110 | I110del | ATA | --- | 1 | 1 | AY.4.2.1 | 0.000149 |
ORF7a | 110 | I110T | aTa | aCa | 1 | 1 | AY.4.5 | 0.000107 |
ORF7a | 110 | I110I | atA | atT | 1 | 1 | AY.42 | 0.00004 |
ORF7a | 110 | I110K | aTa | aAa | 1 | 1 | AY.43 | 0.000004 |
ORF7a | 110 | I110X | ATa | TAa | 1 | 1 | AY.43 | 0.000004 |
ORF7a | 110 | I110F | AtA | TtT | 1 | 1 | AY.44 | 0.000006 |
ORF7a | 110 | I110I | atA | atT | 1 | 1 | AY.44 | 0.000006 |
ORF7a | 110 | I110del2 | ATA | --N | 1 | 1 | AY.44 | 0.000006 |
ORF7a | 110 | I110M | atA | atG | 1 | 1 | AY.45 | 0.000122 |
ORF7a | 110 | I110V | Ata | Gta | 1 | 1 | AY.46 | 0.000104 |
ORF7a | 110 | I110T | aTa | aCa | 1 | 1 | AY.46.1 | 0.001027 |
ORF7a | 110 | I110del | ATA | --- | 1 | 1 | AY.46.4 | 0.000165 |
ORF7a | 110 | I110L | Ata | Tta | 1 | 1 | AY.46.6 | 0.000072 |
ORF7a | 110 | I110L | Ata | Tta | 1 | 1 | AY.47 | 0.000031 |
ORF7a | 110 | I110del1 | Ata | -ta | 1 | 1 | AY.48 | 0.000465 |
ORF7a | 110 | I110T | aTa | aCa | 1 | 1 | AY.48 | 0.000465 |
ORF7a | 110 | I110del | ATA | --- | 1 | 1 | AY.49 | 0.003195 |
ORF7a | 110 | I110V | Ata | Gta | 1 | 1 | AY.5 | 0.000021 |
ORF7a | 110 | I110L | Ata | Tta | 1 | 1 | AY.5 | 0.000021 |
ORF7a | 110 | I110del | ATA | --- | 1 | 1 | AY.57 | 0.000656 |
ORF7a | 110 | I110del1 | Ata | -ta | 1 | 1 | AY.58 | 0.000907 |
ORF7a | 110 | I110del1 | Ata | -ta | 1 | 1 | AY.59 | 0.00053 |
ORF7a | 110 | I110V | Ata | Gta | 1 | 1 | AY.59 | 0.00053 |
ORF7a | 110 | I110G | ATA | GGT | 1 | 1 | AY.60 | 0.000938 |
ORF7a | 110 | I110I | atA | atT | 1 | 1 | AY.61 | 0.000105 |
ORF7a | 110 | I110del1 | Ata | -ta | 1 | 1 | AY.61 | 0.000105 |
ORF7a | 110 | I110T | aTa | aCa | 1 | 1 | AY.61 | 0.000105 |
ORF7a | 110 | I110L | Ata | Cta | 1 | 1 | AY.61 | 0.000105 |
ORF7a | 110 | I110del | ATA | --- | 1 | 1 | AY.65 | 0.000533 |
ORF7a | 110 | I110del1 | Ata | -ta | 1 | 1 | AY.7 | 0.000196 |
ORF7a | 110 | I110del | ATA | --- | 1 | 1 | AY.71 | 0.000475 |
ORF7a | 110 | I110M | atA | atG | 1 | 1 | AY.71 | 0.000475 |
ORF7a | 110 | I110V | Ata | Gta | 1 | 1 | AY.71 | 0.000475 |
ORF7a | 110 | I110V | Ata | Gta | 1 | 1 | AY.72 | 0.001361 |
ORF7a | 110 | I110V | Ata | Gta | 1 | 1 | AY.74 | 0.000116 |
ORF7a | 110 | I110del1 | Ata | -ta | 1 | 1 | AY.74 | 0.000116 |
ORF7a | 110 | I110del1 | Ata | -ta | 1 | 1 | AY.75.1 | 0.00018 |
ORF7a | 110 | I110T | aTa | aCa | 1 | 1 | AY.84 | 0.000437 |
ORF7a | 110 | I110del1 | Ata | -ta | 1 | 1 | AY.85 | 0.000427 |
ORF7a | 110 | I110del | ATA | --- | 1 | 1 | AY.87 | 0.000833 |
ORF7a | 110 | I110del1 | Ata | -ta | 1 | 1 | AY.9.1 | 0.000084 |
ORF7a | 110 | I110L | Ata | Tta | 1 | 1 | AY.9.2 | 0.000037 |
ORF7a | 110 | I110del1 | Ata | -ta | 1 | 1 | AY.9.2 | 0.000037 |
ORF7a | 110 | I110A | ATa | GCa | 1 | 1 | AY.9.2 | 0.000037 |
ORF7a | 110 | I110V | Ata | Gta | 1 | 1 | AY.9.2 | 0.000037 |
ORF7a | 110 | I110del | ATA | --- | 1 | 1 | AY.93 | 0.000273 |
ORF7a | 110 | I110V | Ata | Gta | 1 | 1 | AY.95 | 0.000761 |
ORF7a | 110 | I110V | Ata | Gta | 1 | 1 | AY.96 | 0.002075 |
ORF7a | 110 | I110del | ATA | --- | 1 | 1 | AY.98 | 0.000079 |
ORF7a | 110 | I110del | ATA | --- | 1 | 1 | AY.99 | 0.001049 |
ORF7a | 110 | I110V | AtA | GtT | 1 | 1 | AY.99 | 0.001049 |
ORF7a | 110 | I110V | Ata | Gta | 1 | 1 | AY.99.2 | 0.000092 |
ORF7a | 110 | I110del | ATA | --- | 1 | 1 | AZ.2 | 0.000821 |
ORF7a | 110 | I110del | ATA | --- | 1 | 1 | AZ.3 | 0.00152 |
ORF7a | 110 | I110T | aTa | aCa | 1 | 1 | B | 0.000128 |
ORF7a | 110 | I110del | ATA | --- | 1 | 1 | B | 0.000128 |
ORF7a | 110 | I110M | atA | atG | 1 | 1 | B.1 | 0.000009 |
ORF7a | 110 | I110K | aTa | aAa | 1 | 1 | B.1 | 0.000009 |
ORF7a | 110 | I110del1 | Ata | -ta | 1 | 1 | B.1.1 | 0.000018 |
ORF7a | 110 | I110del | ATA | --- | 1 | 1 | B.1.1.121 | 0.002427 |
ORF7a | 110 | I110del | ATA | --- | 1 | 1 | B.1.1.132 | 0.014925 |
ORF7a | 110 | I110I | atA | atC | 1 | 1 | B.1.1.189 | 0.001513 |
ORF7a | 110 | I110del | ATA | --- | 1 | 1 | B.1.1.222 | 0.000204 |
ORF7a | 110 | I110del1 | Ata | -ta | 1 | 1 | B.1.1.241 | 0.00207 |
ORF7a | 110 | I110del | ATA | --- | 1 | 1 | B.1.1.258 | 0.003257 |
ORF7a | 110 | I110del | ATA | --- | 1 | 1 | B.1.1.265 | 0.003155 |
ORF7a | 110 | I110del | ATA | --- | 1 | 1 | B.1.1.268 | 0.014925 |
ORF7a | 110 | I110del | ATA | --- | 1 | 1 | B.1.1.269 | 0.001353 |
ORF7a | 110 | I110del1 | Ata | -ta | 1 | 1 | B.1.1.274 | 0.005051 |
ORF7a | 110 | I110V | Ata | Gta | 1 | 1 | B.1.1.277 | 0.000759 |
ORF7a | 110 | I110T | aTa | aCa | 1 | 1 | B.1.1.277 | 0.000759 |
ORF7a | 110 | I110del1 | Ata | -ta | 1 | 1 | B.1.1.279 | 0.001121 |
ORF7a | 110 | I110T | aTa | aCa | 1 | 1 | B.1.1.279 | 0.001121 |
ORF7a | 110 | I110del | ATA | --- | 1 | 1 | B.1.1.280 | 0.003086 |
ORF7a | 110 | I110I | atA | atC | 1 | 1 | B.1.1.282 | 0.011628 |
ORF7a | 110 | I110del1 | Ata | -ta | 1 | 1 | B.1.1.284 | 0.000107 |
ORF7a | 110 | I110V | Ata | Gta | 1 | 1 | B.1.1.302 | 0.002075 |
ORF7a | 110 | I110T | aTa | aCa | 1 | 1 | B.1.1.303 | 0.002762 |
ORF7a | 110 | I110L | Ata | Tta | 1 | 1 | B.1.1.311 | 0.000358 |
ORF7a | 110 | I110del | ATA | --- | 1 | 1 | B.1.1.312 | 0.001912 |
ORF7a | 110 | I110del | ATA | --- | 1 | 1 | B.1.1.316 | 0.000925 |
ORF7a | 110 | I110del1 | Ata | -ta | 1 | 1 | B.1.1.318 | 0.000302 |
ORF7a | 110 | I110T | aTa | aCa | 1 | 1 | B.1.1.318 | 0.000302 |
ORF7a | 110 | I110del | ATA | --- | 1 | 1 | B.1.1.331 | 0.011628 |
ORF7a | 110 | I110T | aTa | aCa | 1 | 1 | B.1.1.349 | 0.010309 |
ORF7a | 110 | I110del1 | Ata | -ta | 1 | 1 | B.1.1.359 | 0.027778 |
ORF7a | 110 | I110del | ATA | --- | 1 | 1 | B.1.1.369 | 0.000446 |
ORF7a | 110 | I110K | aTa | aAa | 1 | 1 | B.1.1.377 | 0.001381 |
ORF7a | 110 | I110del1 | Ata | -ta | 1 | 1 | B.1.1.43 | 0.014925 |
ORF7a | 110 | I110del | ATA | --- | 1 | 1 | B.1.1.434 | 0.000349 |
ORF7a | 110 | I110del | ATA | --- | 1 | 1 | B.1.1.437 | 0.010417 |
ORF7a | 110 | I110del | ATA | --- | 1 | 1 | B.1.1.448 | 0.002033 |
ORF7a | 110 | I110V | Ata | Gta | 1 | 1 | B.1.1.507 | 0.008696 |
ORF7a | 110 | I110T | aTa | aCa | 1 | 1 | B.1.1.517 | 0.006803 |
ORF7a | 110 | I110V | Ata | Gta | 1 | 1 | B.1.1.519 | 0.00004 |
ORF7a | 110 | I110T | aTa | aCa | 1 | 1 | B.1.1.526 | 0.003546 |
ORF7a | 110 | I110del | ATA | --- | 1 | 1 | B.1.1.528 | 0.004808 |
ORF7a | 110 | I110del | ATA | --- | 1 | 1 | B.1.1.63 | 0.000386 |
ORF7a | 110 | I110K | aTa | aAa | 1 | 1 | B.1.1.7 | 0.000001 |
ORF7a | 110 | I110del | ATA | --- | 1 | 1 | B.1.1.70 | 0.000341 |
ORF7a | 110 | I110L | Ata | Tta | 1 | 1 | B.1.1.70 | 0.000341 |
ORF7a | 110 | I110V | Ata | Gta | 1 | 1 | B.1.105 | 0.009615 |
ORF7a | 110 | I110T | aTa | aCa | 1 | 1 | B.1.111 | 0.001175 |
ORF7a | 110 | I110V | Ata | Gta | 1 | 1 | B.1.157 | 0.002985 |
ORF7a | 110 | I110del1 | Ata | -ta | 1 | 1 | B.1.160 | 0.000031 |
ORF7a | 110 | I110T | aTa | aCa | 1 | 1 | B.1.160 | 0.000031 |
ORF7a | 110 | I110I | atA | atT | 1 | 1 | B.1.160.16 | 0.000929 |
ORF7a | 110 | I110I | atA | atC | 1 | 1 | B.1.177 | 0.000013 |
ORF7a | 110 | I110del | ATA | --- | 1 | 1 | B.1.177.16 | 0.000664 |
ORF7a | 110 | I110del | ATA | --- | 1 | 1 | B.1.177.21 | 0.000076 |
ORF7a | 110 | I110del1 | Ata | -ta | 1 | 1 | B.1.177.21 | 0.000076 |
ORF7a | 110 | I110L | Ata | Tta | 1 | 1 | B.1.177.23 | 0.003236 |
ORF7a | 110 | I110del | ATA | --- | 1 | 1 | B.1.177.44 | 0.000519 |
ORF7a | 110 | I110del | ATA | --- | 1 | 1 | B.1.177.50 | 0.004695 |
ORF7a | 110 | I110M | atA | atG | 1 | 1 | B.1.177.63 | 0.002703 |
ORF7a | 110 | I110T | aTa | aCa | 1 | 1 | B.1.177.69 | 0.001484 |
ORF7a | 110 | I110del | ATA | --- | 1 | 1 | B.1.177.80 | 0.001912 |
ORF7a | 110 | I110del | ATA | --- | 1 | 1 | B.1.177.83 | 0.001481 |
ORF7a | 110 | I110V | Ata | Gta | 1 | 1 | B.1.2 | 0.000009 |
ORF7a | 110 | I110L | Ata | Tta | 1 | 1 | B.1.2 | 0.000009 |
ORF7a | 110 | I110T | aTa | aCa | 1 | 1 | B.1.210 | 0.002132 |
ORF7a | 110 | I110V | Ata | Gta | 1 | 1 | B.1.214.2 | 0.0006 |
ORF7a | 110 | I110del | ATA | --- | 1 | 1 | B.1.214.2 | 0.0006 |
ORF7a | 110 | I110del | ATA | --- | 1 | 1 | B.1.232 | 0.000537 |
ORF7a | 110 | I110del1 | Ata | -ta | 1 | 1 | B.1.232 | 0.000537 |
ORF7a | 110 | I110T | aTa | aCa | 1 | 1 | B.1.234 | 0.000132 |
ORF7a | 110 | I110del | ATA | --- | 1 | 1 | B.1.235 | 0.002519 |
ORF7a | 110 | I110del | ATA | --- | 1 | 1 | B.1.240 | 0.000216 |
ORF7a | 110 | I110I | atA | atC | 1 | 1 | B.1.242 | 0.018868 |
ORF7a | 110 | I110del1 | Ata | -ta | 1 | 1 | B.1.242 | 0.018868 |
ORF7a | 110 | I110V | Ata | Gta | 1 | 1 | B.1.243 | 0.00007 |
ORF7a | 110 | I110L | Ata | Tta | 1 | 1 | B.1.243 | 0.00007 |
ORF7a | 110 | I110T | aTa | aCa | 1 | 1 | B.1.258.11 | 0.000396 |
ORF7a | 110 | I110I | atA | atT | 1 | 1 | B.1.258.17 | 0.000104 |
ORF7a | 110 | I110del | ATA | --- | 1 | 1 | B.1.265 | 0.001271 |
ORF7a | 110 | I110T | aTa | aCa | 1 | 1 | B.1.298 | 0.002114 |
ORF7a | 110 | I110del | ATA | --- | 1 | 1 | B.1.306 | 0.005714 |
ORF7a | 110 | I110I | atA | atT | 1 | 1 | B.1.332 | 0.003497 |
ORF7a | 110 | I110T | aTa | aCa | 1 | 1 | B.1.335 | 0.010309 |
ORF7a | 110 | I110M | atA | atG | 1 | 1 | B.1.350 | 0.002933 |
ORF7a | 110 | I110I | atA | atC | 1 | 1 | B.1.351 | 0.00003 |
ORF7a | 110 | I110V | Ata | Gta | 1 | 1 | B.1.351.5 | 0.0006 |
ORF7a | 110 | I110I | atA | atC | 1 | 1 | B.1.36 | 0.000146 |
ORF7a | 110 | I110M | atA | atG | 1 | 1 | B.1.36.8 | 0.001 |
ORF7a | 110 | I110del | ATA | --- | 1 | 1 | B.1.362 | 0.001541 |
ORF7a | 110 | I110del1 | Ata | -ta | 1 | 1 | B.1.369 | 0.000285 |
ORF7a | 110 | I110del | ATA | --- | 1 | 1 | B.1.371 | 0.001122 |
ORF7a | 110 | I110del | ATA | --- | 1 | 1 | B.1.375 | 0.00082 |
ORF7a | 110 | I110V | Ata | Gta | 1 | 1 | B.1.380 | 0.006623 |
ORF7a | 110 | I110M | atA | atG | 1 | 1 | B.1.396 | 0.000706 |
ORF7a | 110 | I110T | aTa | aCa | 1 | 1 | B.1.413 | 0.004255 |
ORF7a | 110 | I110L | Ata | Tta | 1 | 1 | B.1.427 | 0.00005 |
ORF7a | 110 | I110V | Ata | Gta | 1 | 1 | B.1.427 | 0.00005 |
ORF7a | 110 | I110del1 | Ata | -ta | 1 | 1 | B.1.427 | 0.00005 |
ORF7a | 110 | I110L | Ata | Tta | 1 | 1 | B.1.429 | 0.000024 |
ORF7a | 110 | I110del1 | Ata | -ta | 1 | 1 | B.1.429 | 0.000024 |
ORF7a | 110 | I110I | atA | atC | 1 | 1 | B.1.438 | 0.006536 |
ORF7a | 110 | I110T | aTa | aCa | 1 | 1 | B.1.448 | 0.002625 |
ORF7a | 110 | I110del | ATA | --- | 1 | 1 | B.1.459 | 0.004082 |
ORF7a | 110 | I110I | atA | atC | 1 | 1 | B.1.466.2 | 0.000391 |
ORF7a | 110 | I110del | ATA | --- | 1 | 1 | B.1.468 | 0.005714 |
ORF7a | 110 | I110M | atA | atG | 1 | 1 | B.1.470 | 0.001404 |
ORF7a | 110 | I110del | ATA | --- | 1 | 1 | B.1.470 | 0.001404 |
ORF7a | 110 | I110V | Ata | Gta | 1 | 1 | B.1.499 | 0.00105 |
ORF7a | 110 | I110del | ATA | --- | 1 | 1 | B.1.503 | 0.002488 |
ORF7a | 110 | I110del | ATA | --- | 1 | 1 | B.1.517 | 0.000427 |
ORF7a | 110 | I110T | aTa | aCa | 1 | 1 | B.1.523 | 0.002451 |
ORF7a | 110 | I110V | Ata | Gta | 1 | 1 | B.1.525 | 0.000113 |
ORF7a | 110 | I110L | Ata | Cta | 1 | 1 | B.1.526 | 0.000024 |
ORF7a | 110 | I110V | Ata | Gta | 1 | 1 | B.1.526 | 0.000024 |
ORF7a | 110 | I110del | ATA | --- | 1 | 1 | B.1.527 | 0.003704 |
ORF7a | 110 | I110L | Ata | Tta | 1 | 1 | B.1.530 | 0.007143 |
ORF7a | 110 | I110V | Ata | Gta | 1 | 1 | B.1.561 | 0.000397 |
ORF7a | 110 | I110L | Ata | Tta | 1 | 1 | B.1.589 | 0.007576 |
ORF7a | 110 | I110T | aTa | aCa | 1 | 1 | B.1.595 | 0.000261 |
ORF7a | 110 | I110del1 | Ata | -ta | 1 | 1 | B.1.595 | 0.000261 |
ORF7a | 110 | I110T | aTa | aCa | 1 | 1 | B.1.596 | 0.000087 |
ORF7a | 110 | I110del1 | atA | at- | 1 | 1 | B.1.596 | 0.000087 |
ORF7a | 110 | I110R | aTa | aGa | 1 | 1 | B.1.609 | 0.000479 |
ORF7a | 110 | I110T | aTa | aCa | 1 | 1 | B.1.609 | 0.000479 |
ORF7a | 110 | I110M | atA | atG | 1 | 1 | B.1.617.2 | 0.000004 |
ORF7a | 110 | I110S | ATA | TCG | 1 | 1 | B.1.617.2 | 0.000004 |
ORF7a | 110 | I110L | Ata | Tta | 1 | 1 | B.1.617.2 | 0.000004 |
ORF7a | 110 | I110T | aTa | aCa | 1 | 1 | B.1.621 | 0.000089 |
ORF7a | 110 | I110del | ATA | --- | 1 | 1 | B.1.630 | 0.005236 |
ORF7a | 110 | I110V | Ata | Gta | 1 | 1 | B.1.637 | 0.000073 |
ORF7a | 110 | I110V | Ata | Gta | 1 | 1 | B.1.78 | 0.008547 |
ORF7a | 110 | I110del | ATA | --- | 1 | 1 | B.12 | 0.00641 |
ORF7a | 110 | I110I | atA | atT | 1 | 1 | B.28 | 0.003279 |
ORF7a | 110 | I110del | ATA | --- | 1 | 1 | B.30 | 0.014706 |
ORF7a | 110 | I110T | aTa | aCa | 1 | 1 | B.40 | 0.000364 |
ORF7a | 110 | I110V | Ata | Gta | 1 | 1 | C.1.2 | 0.004255 |
ORF7a | 110 | I110V | Ata | Gta | 1 | 1 | C.37 | 0.000116 |
ORF7a | 110 | I110L | Ata | Tta | 1 | 1 | D.2 | 0.000075 |
ORF7a | 110 | I110T | aTa | aCa | 1 | 1 | D.2 | 0.000075 |
ORF7a | 110 | I110M | atA | atG | 1 | 1 | N.5 | 0.001767 |
ORF7a | 110 | I110del | ATA | --- | 1 | 1 | N.5 | 0.001767 |
ORF7a | 110 | I110del | ATA | --- | 1 | 1 | N.6 | 0.007092 |
ORF7a | 110 | I110M | atA | atG | 1 | 1 | P.1 | 0.000016 |
ORF7a | 110 | I110del | ATA | --- | 1 | 1 | P.1.12 | 0.000484 |
ORF7a | 110 | I110V | Ata | Gta | 1 | 1 | P.1.12 | 0.000484 |
ORF7a | 110 | I110T | aTa | aCa | 1 | 1 | P.1.12 | 0.000484 |
ORF7a | 110 | I110del | ATA | --- | 1 | 1 | P.1.13 | 0.000898 |
ORF7a | 110 | I110del1 | Ata | -ta | 1 | 1 | P.1.15 | 0.000232 |
ORF7a | 110 | I110del | ATA | --- | 1 | 1 | P.1.16 | 0.000374 |
ORF7a | 110 | I110del | ATA | --- | 1 | 1 | P.1.17 | 0.000162 |
ORF7a | 110 | I110del | ATA | --- | 1 | 1 | P.1.4 | 0.000977 |
ORF7a | 110 | I110del1 | Ata | -ta | 1 | 1 | P.1.4 | 0.000977 |
ORF7a | 110 | I110del | ATA | --- | 1 | 1 | Q.1 | 0.000126 |
ORF7a | 110 | I110T | aTa | aCa | 1 | 1 | Q.1 | 0.000126 |
ORF7a | 110 | I110del | ATA | --- | 1 | 1 | Q.2 | 0.000613 |
ORF7a | 110 | I110T | aTa | aCa | 1 | 1 | Q.4 | 0.000455 |
ORF7a | 110 | I110T | aTa | aCa | 1 | 1 | Q.8 | 0.000165 |
ORF7a | 110 | I110del1 | Ata | -ta | 1 | 1 | Q.8 | 0.000165 |
ORF7a | 110 | I110T | aTa | aCa | 1 | 1 | R.1 | 0.00009 |
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CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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