CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF7a : CodonNum = 105 & Codon = gcT

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF7a105A105AsyngcGgcT24125650.23424527706-27708

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF7a105A105AgcGgcT5652412All0.000108
ORF7a105A105AgcGgcT85866AY.430.000377
ORF7a105A105AgcGgcT44497AY.40.000068
ORF7a105A105AgcGgcT64149B.1.1.70.000057
ORF7a105A105AgcGgcT5179B.1.617.20.000192
ORF7a105A105AgcGgcT964B.1.20.000079
ORF7a105A105AgcGgcT1144B.10.000101
ORF7a105A105AgcGgcT4343B.1.1.3430.895833
ORF7a105A105AgcGgcT3131B.1.1.500.021045
ORF7a105A105AgcGgcT1029AY.440.000061
ORF7a105A105AgcGgcT724AY.30.00007
ORF7a105A105AgcGgcT123AY.1180.000063
ORF7a105A105AgcGgcT1221B.1.10.000218
ORF7a105A105AgcGgcT621P.10.000095
ORF7a105A105AgcGgcT620AY.1030.000037
ORF7a105A105AgcGgcT1017AY.250.00006
ORF7a105A105AgcGgcT1516B.1.4270.000757
ORF7a105A105AgcGgcT815AY.260.000226
ORF7a105A105AgcGgcT1414AY.70.002744
ORF7a105A105AgcGgcT110B.1.5960.000087
ORF7a105A105AgcGgcT49AY.1020.000106
ORF7a105A105AgcGgcT58B.1.3510.000149
ORF7a105A105AgcGgcT47AY.390.000099
ORF7a105A105AgcGgcT77AY.39.10.000277
ORF7a105A105AgcGgcT27AY.60.000082
ORF7a105A105AgcGgcT27C.370.000232
ORF7a105A105AgcGgcT160.055556
ORF7a105A105AgcGgcT66AY.1110.001099
ORF7a105A105AgcGgcT26AY.1200.000074
ORF7a105A105AgcGgcT45AY.1140.000924
ORF7a105A105AgcGgcT35AY.4.20.000065
ORF7a105A105AgcGgcT55AY.4.30.004209
ORF7a105A105AgcGgcT35AY.50.000062
ORF7a105A105AgcGgcT15AY.9.20.000037
ORF7a105A105AgcGgcT35B.1.1770.00004
ORF7a105A105AgcGgcT35B.1.2210.000213
ORF7a105A105AgcGgcT44AY.1100.000451
ORF7a105A105AgcGgcT24AY.290.000032
ORF7a105A105AgcGgcT34AY.4.50.000322
ORF7a105A105AgcGgcT14AY.460.000104
ORF7a105A105AgcGgcT44B.1.1.2280.012195
ORF7a105A105AgcGgcT14B.1.2400.000216
ORF7a105A105AgcGgcT24B.1.2430.000139
ORF7a105A105AgcGgcT34P.1.140.000143
ORF7a105A105AgcGgcT33AY.10.001187
ORF7a105A105AgcGgcT13AY.1130.000142
ORF7a105A105AgcGgcT23AY.200.000078
ORF7a105A105AgcGgcT33AY.420.000121
ORF7a105A105AgcGgcT13AY.46.40.000165
ORF7a105A105AgcGgcT13AY.7.10.000113
ORF7a105A105AgcGgcT33AY.740.000347
ORF7a105A105AgcGgcT13AY.90.000068
ORF7a105A105AgcGgcT33B.1.1.3030.008287
ORF7a105A105AgcGgcT33B.1.2180.015464
ORF7a105A105AgcGgcT33B.1.3490.002144
ORF7a105A105AgcGgcT13B.1.4290.000024
ORF7a105A105AgcGgcT22AY.1170.000169
ORF7a105A105AgcGgcT12AY.23.10.000417
ORF7a105A105AgcGgcT12AY.340.000097
ORF7a105A105AgcGgcT22AY.5.30.000675
ORF7a105A105AgcGgcT12B.1.1.2160.00089
ORF7a105A105AgcGgcT22B.1.1.3360.033333
ORF7a105A105AgcGgcT22B.1.110.30.001437
ORF7a105A105AgcGgcT12B.1.2340.000132
ORF7a105A105AgcGgcT12B.1.3960.000706
ORF7a105A105AgcGgcT22B.1.6290.026667
ORF7a105A105AgcGgcT11AY.1010.00049
ORF7a105A105AgcGgcT11AY.120.2.10.000498
ORF7a105A105AgcGgcT11AY.4.2.10.000149
ORF7a105A105AgcGgcT11AY.46.60.000072
ORF7a105A105AgcGgcT11AY.920.000287
ORF7a105A105AgcGgcT11AY.970.001701
ORF7a105A105AgcGgcT11AY.99.20.000092
ORF7a105A105AgcGgcT11B0.000128
ORF7a105A105AgcGgcT11B.1.1.2220.000204
ORF7a105A105AgcGgcT11B.1.1.3050.003861
ORF7a105A105AgcGgcT11B.1.1.3970.002252
ORF7a105A105AgcGgcT11B.1.1.4340.000349
ORF7a105A105AgcGgcT11B.1.1100.004525
ORF7a105A105AgcGgcT11B.1.351.20.000303
ORF7a105A105AgcGgcT11B.1.360.000146
ORF7a105A105AgcGgcT11B.1.36.390.002217
ORF7a105A105AgcGgcT11B.1.5260.000024
ORF7a105A105AgcGgcT11B.1.5950.000261
ORF7a105A105AgcGgcT11B.40.002208
ORF7a105A105AgcGgcT11P.1.150.000232
ORF7a105A105AgcGgcT11Q.30.000145
ORF7a105A105AgcGgcT11Q.40.000455