CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF7a : CodonNum = 105 & Codon = Tcg

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF7a105A105SnonsynGcgTcg433043230.99838327706-27708

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF7a105A105SGcgTcg43234330All0.000827
ORF7a105A105SGcgTcg19281929AY.98.10.093375
ORF7a105A105SGcgTcg552552A.2.5.20.867925
ORF7a105A105SGcgTcg260260B.1.1.70.000233
ORF7a105A105SGcgTcg176176AY.40.000274
ORF7a105A105SGcgTcg159160AY.430.000704
ORF7a105A105SGcgTcg138138AY.230.009625
ORF7a105A105SGcgTcg111111B.1.617.20.000418
ORF7a105A105SGcgTcg105105AY.9.10.008791
ORF7a105A105SGcgTcg101101AY.260.002859
ORF7a105A105SGcgTcg6767AY.1030.000416
ORF7a105A105SGcgTcg6262AY.30.000617
ORF7a105A105SGcgTcg4242AY.980.003318
ORF7a105A105SGcgTcg3838AY.250.000229
ORF7a105A105SGcgTcg3435B.1.10.000617
ORF7a105A105SGcgTcg3535B.1.5250.003961
ORF7a105A105SGcgTcg3030AY.420.001207
ORF7a105A105SGcgTcg2727AY.610.002829
ORF7a105A105SGcgTcg2727P.1.140.001291
ORF7a105A105SGcgTcg2525AY.1000.00115
ORF7a105A105SGcgTcg2525AY.540.002384
ORF7a105A105SGcgTcg2323B.10.000211
ORF7a105A105SGcgTcg2123B.1.2210.001492
ORF7a105A105SGcgTcg1819AY.1020.000477
ORF7a105A105SGcgTcg1919AY.460.001978
ORF7a105A105SGcgTcg1818AY.440.00011
ORF7a105A105SGcgTcg1717B.1.5260.0004
ORF7a105A105SGcgTcg1414B.1.6190.012195
ORF7a105A105SGcgTcg1010AY.1130.001424
ORF7a105A105SGcgTcg1010P.10.000158
ORF7a105A105SGcgTcg88AY.390.000198
ORF7a105A105SGcgTcg88B.1.20.00007
ORF7a105A105SGcgTcg77AY.39.10.000277
ORF7a105A105SGcgTcg77AY.470.000218
ORF7a105A105SGcgTcg77B.1.4290.000165
ORF7a105A105SGcgTcg77B.1.5960.00061
ORF7a105A105SGcgTcg66AY.140.000528
ORF7a105A105SGcgTcg66C.36.30.003403
ORF7a105A105SGcgTcg55B.1.4270.000252
ORF7a105A105SGcgTcg340.166667
ORF7a105A105SGcgTcg44A.2.50.001996
ORF7a105A105SGcgTcg44AY.1180.000251
ORF7a105A105SGcgTcg44AY.1190.000141
ORF7a105A105SGcgTcg44AY.340.000388
ORF7a105A105SGcgTcg44AY.4.20.000087
ORF7a105A105SGcgTcg44AY.690.000747
ORF7a105A105SGcgTcg44AY.800.004515
ORF7a105A105SGcgTcg44B.1.3510.000119
ORF7a105A105SGcgTcg44B.1.6280.001409
ORF7a105A105SGcgTcg33AY.1140.000693
ORF7a105A105SGcgTcg33AY.1170.000254
ORF7a105A105SGcgTcg33AY.1200.000112
ORF7a105A105SGcgTcg33AY.1210.000406
ORF7a105A105SGcgTcg33AY.320.001597
ORF7a105A105SGcgTcg33AY.46.50.000595
ORF7a105A105SGcgTcg33AY.50.000062
ORF7a105A105SGcgTcg33AY.550.002752
ORF7a105A105SGcgTcg33AY.60.000123
ORF7a105A105SGcgTcg33AY.630.001161
ORF7a105A105SGcgTcg33AY.90.000203
ORF7a105A105SGcgTcg33B.1.177.560.002003
ORF7a105A105SGcgTcg33B.1.177.600.000655
ORF7a105A105SGcgTcg33B.1.3670.002377
ORF7a105A105SGcgTcg33B.1.6210.000266
ORF7a105A105SGcgTcg33P.1.60.005837
ORF7a105A105SGcgTcg22AY.130.000322
ORF7a105A105SGcgTcg22AY.200.000078
ORF7a105A105SGcgTcg22AY.280.003781
ORF7a105A105SGcgTcg22AY.290.000032
ORF7a105A105SGcgTcg22AY.3.10.000171
ORF7a105A105SGcgTcg22AY.450.000243
ORF7a105A105SGcgTcg22AY.5.40.000553
ORF7a105A105SGcgTcg22AY.75.10.000361
ORF7a105A105SGcgTcg22AY.930.000546
ORF7a105A105SGcgTcg22AY.99.10.003106
ORF7a105A105SGcgTcg22B0.000256
ORF7a105A105SGcgTcg22B.1.1.2220.000408
ORF7a105A105SGcgTcg22B.1.1.280.000622
ORF7a105A105SGcgTcg22B.1.1.330.000842
ORF7a105A105SGcgTcg22B.1.1770.000026
ORF7a105A105SGcgTcg22B.1.177.800.003824
ORF7a105A105SGcgTcg22B.1.2060.001631
ORF7a105A105SGcgTcg22B.1.2430.000139
ORF7a105A105SGcgTcg22B.1.258.170.000208
ORF7a105A105SGcgTcg22B.1.5750.000607
ORF7a105A105SGcgTcg22B.1.5820.000981
ORF7a105A105SGcgTcg22B.1.6370.000146
ORF7a105A105SGcgTcg22C.370.000232
ORF7a105A105SGcgTcg22P.1.170.000324
ORF7a105A105SGcgTcg11A0.000387
ORF7a105A105SGcgTcg11AY.1160.000287
ORF7a105A105SGcgTcg11AY.120.10.000321
ORF7a105A105SGcgTcg11AY.300.000396
ORF7a105A105SGcgTcg11AY.330.000067
ORF7a105A105SGcgTcg11AY.4.50.000107
ORF7a105A105SGcgTcg11AY.46.20.000635
ORF7a105A105SGcgTcg11AY.46.60.000072
ORF7a105A105SGcgTcg11AY.600.000938
ORF7a105A105SGcgTcg11AY.680.000274
ORF7a105A105SGcgTcg11AY.7.10.000113
ORF7a105A105SGcgTcg11AY.740.000116
ORF7a105A105SGcgTcg11AY.750.000056
ORF7a105A105SGcgTcg11AY.820.001357
ORF7a105A105SGcgTcg11AY.840.000437
ORF7a105A105SGcgTcg11AY.9.20.000037
ORF7a105A105SGcgTcg11AY.910.00073
ORF7a105A105SGcgTcg11AY.940.000443
ORF7a105A105SGcgTcg11B.1.1.1530.001095
ORF7a105A105SGcgTcg11B.1.1.2140.000055
ORF7a105A105SGcgTcg11B.1.1.3480.000796
ORF7a105A105SGcgTcg11B.1.1.3540.004386
ORF7a105A105SGcgTcg11B.1.1.5190.00004
ORF7a105A105SGcgTcg11B.1.177.810.000189
ORF7a105A105SGcgTcg11B.1.2980.002114
ORF7a105A105SGcgTcg11B.1.360.000146
ORF7a105A105SGcgTcg11B.1.4280.00102
ORF7a105A105SGcgTcg11B.1.5580.004566
ORF7a105A105SGcgTcg11B.1.5970.00463
ORF7a105A105SGcgTcg11B.1.6000.005848
ORF7a105A105SGcgTcg11B.1.6120.002653
ORF7a105A105SGcgTcg11B.1.6230.000536
ORF7a105A105SGcgTcg11B.550.00295
ORF7a105A105SGcgTcg11D.20.000075
ORF7a105A105SGcgTcg11Q.80.000165