CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF7a : CodonNum = 104 & Codon = gCt

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF7a104V104AnonsyngTtgCt224224127703-27705

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF7a104V104AgTtgCt224224All0.000043
ORF7a104V104AgTtgCt5353AY.40.000082
ORF7a104V104AgTtgCt5252B.1.1.70.000047
ORF7a104V104AgTtgCt4040AY.440.000243
ORF7a104V104AgTtgCt2121B.1.617.20.000079
ORF7a104V104AgTtgCt1010AY.940.004427
ORF7a104V104AgTtgCt55AY.1030.000031
ORF7a104V104AgTtgCt55AY.30.00005
ORF7a104V104AgTtgCt55AY.430.000022
ORF7a104V104AgTtgCt33AY.39.10.000119
ORF7a104V104AgTtgCt33B.1.360.000438
ORF7a104V104AgTtgCt22AY.200.000078
ORF7a104V104AgTtgCt22AY.46.60.000144
ORF7a104V104AgTtgCt22B.10.000018
ORF7a104V104AgTtgCt22B.1.1600.000062
ORF7a104V104AgTtgCt22B.1.5250.000226
ORF7a104V104AgTtgCt22P.10.000032
ORF7a104V104AgTtgCt11A.60.005128
ORF7a104V104AgTtgCt11AY.160.00038
ORF7a104V104AgTtgCt11AY.250.000006
ORF7a104V104AgTtgCt11AY.4.20.000022
ORF7a104V104AgTtgCt11AY.50.000021
ORF7a104V104AgTtgCt11AY.750.000056
ORF7a104V104AgTtgCt11AY.9.10.000084
ORF7a104V104AgTtgCt11AY.98.10.000048
ORF7a104V104AgTtgCt11AY.99.20.000092
ORF7a104V104AgTtgCt11B.1.10.000018
ORF7a104V104AgTtgCt11B.1.1.1530.001095
ORF7a104V104AgTtgCt11B.1.1.1980.001468
ORF7a104V104AgTtgCt11B.1.20.000009
ORF7a104V104AgTtgCt11B.1.3360.002439
ORF7a104V104AgTtgCt11B.1.5950.000261