CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF7a : CodonNum = 103

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF7a103I103deldelATT---69316931127700-27702
ORF7a103I103del1delAtt-tt152314370.94353327700-27702
ORF7a103I103del1delatTat-1523540.035456327700-27702
ORF7a103I103del1delaTta-t1523250.01641527700-27702
ORF7a103I103del1delATT-NN152340.002626427700-27702
ORF7a103I103del1delAtT-tN152320.001313227700-27702
ORF7a103I103del1delATt-Ct152310.00065659927700-27702
ORF7a103I103del2delaTTa--3132980.95207727700-27702
ORF7a103I103del2delATt--t313140.044728427700-27702
ORF7a103I103del2delATT--N31310.0031948927700-27702
ORF7a103I103VnonsynAttGtt3002980.99333327700-27702
ORF7a103I103VnonsynAtTGtA30010.0033333327700-27702
ORF7a103I103VnonsynAtTGtG30010.0033333327700-27702
ORF7a103I103TnonsynaTtaCt2362340.99152527700-27702
ORF7a103I103TnonsynaTTaCA23610.0042372927700-27702
ORF7a103I103TnonsynaTTaCC23610.0042372927700-27702
ORF7a103I103IsynatTatC2331620.69527927700-27702
ORF7a103I103IsynatTatA233710.30472127700-27702
ORF7a103I103FnonsynAttTtt152152127700-27702
ORF7a103I103LnonsynAttCtt52390.7527700-27702
ORF7a103I103LnonsynAtTTtA5240.076923127700-27702
ORF7a103I103LnonsynAtTTtG5240.076923127700-27702
ORF7a103I103LnonsynAtTCtG5240.076923127700-27702
ORF7a103I103LnonsynAtTCtA5210.019230827700-27702
ORF7a103I103SnonsynaTtaGt4141127700-27702
ORF7a103I103MnonsynatTatG1515127700-27702
ORF7a103I103KnonsynaTTaAA1212127700-27702
ORF7a103I103NnonsynaTtaAt1212127700-27702
ORF7a103I103RnonsynATtCGt840.527700-27702
ORF7a103I103RnonsynATTCGG840.527700-27702
ORF7a103I103CnonsynATtTGt55127700-27702
ORF7a103I103WnonsynATTTGG44127700-27702
ORF7a103I103YnonsynATtTAt22127700-27702
ORF7a103I103HnonsynATtCAt11127700-27702
ORF7a103I103QnonsynATTCAA11127700-27702
ORF7a103I103XnonsynATTTAA11127700-27702

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF7a103I103delATT---69316931All0.001326
ORF7a103I103delATT---16341634B.1.1.70.001463
ORF7a103I103del1Att-tt14371523All0.000275
ORF7a103I103del1atTat-541523All0.00001
ORF7a103I103del1aTta-t251523All0.000005
ORF7a103I103del1ATT-NN41523All0.000001
ORF7a103I103del1AtT-tN21523All0
ORF7a103I103del1ATt-Ct11523All0
ORF7a103I103delATT---11361136AY.39.1.10.823188
ORF7a103I103delATT---601601AY.40.000935
ORF7a103I103delATT---419419AY.250.00252
ORF7a103I103del1Att-tt350353AY.250.002105
ORF7a103I103del1ATT-NN2353AY.250.000012
ORF7a103I103del1atTat-1353AY.250.000006
ORF7a103I103del2aTTa--298313All0.000057
ORF7a103I103del2ATt--t14313All0.000003
ORF7a103I103del2ATT--N1313All0
ORF7a103I103VAttGtt298300All0.000057
ORF7a103I103VAtTGtG1300All0
ORF7a103I103VAtTGtA1300All0
ORF7a103I103delATT---273273AY.39.10.010814
ORF7a103I103delATT---257257AY.430.001139
ORF7a103I103del1Att-tt245245AY.750.013725
ORF7a103I103TaTtaCt234236All0.000045
ORF7a103I103TaTTaCA1236All0
ORF7a103I103TaTTaCC1236All0
ORF7a103I103IatTatC162233All0.000031
ORF7a103I103IatTatA71233All0.000014
ORF7a103I103del1Att-tt161224B.1.1.70.000144
ORF7a103I103del1atTat-38224B.1.1.70.000034
ORF7a103I103del1aTta-t25224B.1.1.70.000022
ORF7a103I103delATT---202202B.1.617.20.000761
ORF7a103I103delATT---159159AY.1030.000987
ORF7a103I103FAttTtt152152All0.000029
ORF7a103I103delATT---136136AY.440.000828
ORF7a103I103VAttGtt118118B.1.1.70.000106
ORF7a103I103del1Att-tt109117AY.40.00017
ORF7a103I103del1atTat-8117AY.40.000012
ORF7a103I103delATT---112112AY.30.001114
ORF7a103I103delATT---107107AY.330.007145
ORF7a103I103TaTtaCt7981B.1.617.20.000297
ORF7a103I103TaTTaCA181B.1.617.20.000004
ORF7a103I103TaTTaCC181B.1.617.20.000004
ORF7a103I103delATT---7777P.1.100.020749
ORF7a103I103del1Att-tt7676AY.440.000463
ORF7a103I103delATT---7575B.10.000687
ORF7a103I103delATT---6868AY.290.001073
ORF7a103I103del1Att-tt6567B.1.617.20.000245
ORF7a103I103del1AtT-tN167B.1.617.20.000004
ORF7a103I103del1atTat-167B.1.617.20.000004
ORF7a103I103delATT---6565B.1.20.000572
ORF7a103I103delATT---6363AY.390.001557
ORF7a103I103del2aTTa--6060AY.250.000361
ORF7a103I103delATT---5757AY.460.005933
ORF7a103I103delATT---5757B.1.5260.00134
ORF7a103I103delATT---5757B.120.365385
ORF7a103I103del1Att-tt5454AY.3.10.004604
ORF7a103I103LAttCtt3952All0.000007
ORF7a103I103LAtTTtA452All0.000001
ORF7a103I103LAtTCtG452All0.000001
ORF7a103I103LAtTTtG452All0.000001
ORF7a103I103LAtTCtA152All0
ORF7a103I103delATT---5252P.10.000819
ORF7a103I103delATT---5151AY.420.002052
ORF7a103I103delATT---5050B.1.1.5190.001986
ORF7a103I103delATT---4646B.1.1770.000606
ORF7a103I103IatTatC3445AY.40.000053
ORF7a103I103IatTatA1145AY.40.000017
ORF7a103I103del1Att-tt4545AY.50.000929
ORF7a103I103delATT---4545B.1.3510.001338
ORF7a103I103TaTtaCt4343AY.50.000888
ORF7a103I103del2aTTa--4343B.1.1.70.000038
ORF7a103I103SaTtaGt4141All0.000008
ORF7a103I103del2aTTa--4141AY.40.000064
ORF7a103I103delATT---3838AY.1020.001008
ORF7a103I103delATT---3838AY.740.004395
ORF7a103I103FAttTtt3838B.1.1.70.000034
ORF7a103I103delATT---3333AY.1180.002067
ORF7a103I103IatTatC2232B.1.1.70.00002
ORF7a103I103IatTatA1032B.1.1.70.000009
ORF7a103I103delATT---3131AY.260.000878
ORF7a103I103IatTatC2831B.1.617.20.000105
ORF7a103I103IatTatA331B.1.617.20.000011
ORF7a103I103TaTtaCt2929AY.40.000045
ORF7a103I103delATT---2929AY.70.005684
ORF7a103I103del2aTTa--2829B.1.617.20.000105
ORF7a103I103del2ATt--t129B.1.617.20.000004
ORF7a103I103delATT---2828AY.470.000871
ORF7a103I103delATT---2727B.1.10.00049
ORF7a103I103VAttGtt2424B.1.20.000211
ORF7a103I103delATT---2323AY.120.10.007384
ORF7a103I103del1Att-tt2323AY.30.000229
ORF7a103I103del1Att-tt1923B.10.000174
ORF7a103I103del1atTat-223B.10.000018
ORF7a103I103del1ATt-Ct123B.10.000009
ORF7a103I103del1AtT-tN123B.10.000009
ORF7a103I103VAttGtt2222AY.40.000034
ORF7a103I103delATT---2222AY.530.006325
ORF7a103I103delATT---2222B.1.1.2140.00122
ORF7a103I103delATT---2222B.1.4270.001111
ORF7a103I103delATT---2121AY.9.20.000771
ORF7a103I103delATT---2020AY.1200.000744
ORF7a103I103IatTatA2020AY.290.000315
ORF7a103I103TaTtaCt2020AY.430.000089
ORF7a103I103delATT---2020B.1.36.390.044346
ORF7a103I103IatTatC2020B.1.3700.16
ORF7a103I103delATT---1919AY.750.001064
ORF7a103I103del1Att-tt1718AY.1030.000106
ORF7a103I103del1atTat-118AY.1030.000006
ORF7a103I103del1Att-tt1617AY.260.000453
ORF7a103I103del1atTat-117AY.260.000028
ORF7a103I103del2aTTa--1717AY.440.000103
ORF7a103I103del1Att-tt1717AY.9.10.001423
ORF7a103I103del2ATt--t916AY.1030.000056
ORF7a103I103del2aTTa--716AY.1030.000043
ORF7a103I103delATT---1616AY.50.00033
ORF7a103I103MatTatG1515All0.000003
ORF7a103I103FAttTtt1515AY.40.000023
ORF7a103I103IatTatC1415AY.430.000062
ORF7a103I103IatTatA115AY.430.000004
ORF7a103I103delATT---1515AY.60.000617
ORF7a103I103delATT---1515AY.90.001014
ORF7a103I103delATT---1515B.1.1.370.002893
ORF7a103I103del1Att-tt1414AY.1000.000644
ORF7a103I103delATT---1414AY.1160.004015
ORF7a103I103delATT---1414AY.1190.000494
ORF7a103I103VAttGtt1414B.1.10.000254
ORF7a103I103delATT---1414B.1.177.620.016687
ORF7a103I103TaTtaCt1313AY.30.000129
ORF7a103I103delATT---1313AY.340.001261
ORF7a103I103del2aTTa--813AY.470.000249
ORF7a103I103del2ATt--t413AY.470.000124
ORF7a103I103del2ATT--N113AY.470.000031
ORF7a103I103del1Att-tt1213P.10.000189
ORF7a103I103del1ATT-NN113P.10.000016
ORF7a103I103KaTTaAA1212All0.000002
ORF7a103I103NaTtaAt1212All0.000002
ORF7a103I103FAttTtt1212AY.1030.000075
ORF7a103I103delATT---1212AY.1210.001624
ORF7a103I103delATT---1212AY.910.008766
ORF7a103I103delATT---1212B.1.4290.000282
ORF7a103I103del1Att-tt1111AY.1190.000388
ORF7a103I103LAttCtt1111AY.40.000017
ORF7a103I103delATT---1111AY.4.20.000239
ORF7a103I103del1Att-tt911AY.430.00004
ORF7a103I103del1atTat-111AY.430.000004
ORF7a103I103del1ATT-NN111AY.430.000004
ORF7a103I103delATT---1111AY.7.20.006152
ORF7a103I103delATT---1111B.1.2340.001451
ORF7a103I103del1Att-tt1111B.1.6210.000974
ORF7a103I103delATT---1010AY.1000.00046
ORF7a103I103del2aTTa--1010AY.3.10.000853
ORF7a103I103VAttGtt1010AY.340.00097
ORF7a103I103del2aTTa--1010AY.430.000044
ORF7a103I103delATT---1010C.370.001161
ORF7a103I103delATT---99AY.1130.001282
ORF7a103I103SaTtaGt99AY.1170.000761
ORF7a103I103delATT---99AY.200.00035
ORF7a103I103LAtTTtG39AY.260.000085
ORF7a103I103LAtTCtG39AY.260.000085
ORF7a103I103LAttCtt39AY.260.000085
ORF7a103I103del1Att-tt89AY.7.20.004474
ORF7a103I103del1atTat-19AY.7.20.000559
ORF7a103I103delATT---99AY.98.10.000436
ORF7a103I103delATT---99AY.99.20.000829
ORF7a103I103delATT---99B.1.1.2220.001836
ORF7a103I103VAttGtt99B.1.1.5190.000357
ORF7a103I103delATT---99B.1.6210.000797
ORF7a103I103delATT---99P.1.140.00043
ORF7a103I103delATT---99Q.80.001484
ORF7a103I103RATTCGG48All0.000001
ORF7a103I103RATtCGt48All0.000001
ORF7a103I103del1Att-tt88AY.1020.000212
ORF7a103I103delATT---88AY.46.60.000578
ORF7a103I103del1Att-tt88AY.470.000249
ORF7a103I103delATT---88B.1.1.2840.000859
ORF7a103I103TaTtaCt88B.1.1.70.000007
ORF7a103I103MatTatG88B.1.110.30.005747
ORF7a103I103delATT---88B.1.2210.000568
ORF7a103I103TaTtaCt88B.1.258.170.000832
ORF7a103I103delATT---88B.1.5250.000905
ORF7a103I103delATT---88D.20.0006
ORF7a103I103del1Att-tt77AY.120.10.002247
ORF7a103I103del1Att-tt77AY.160.002658
ORF7a103I103delATT---77AY.230.000488
ORF7a103I103delATT---77AY.29.10.001544
ORF7a103I103del1Att-tt77B.1.10.000127
ORF7a103I103VAttGtt77B.1.177.620.008343
ORF7a103I103del1Att-tt77B.1.20.000062
ORF7a103I103delATT---77B.1.2400.001509
ORF7a103I103del1Att-tt77B.1.2430.000487
ORF7a103I103delATT---66AY.1010.002943
ORF7a103I103del1Att-tt66AY.1180.000376
ORF7a103I103delATT---66AY.140.000528
ORF7a103I103FAttTtt66AY.250.000036
ORF7a103I103IatTatC66AY.250.000036
ORF7a103I103RATtCGt36AY.260.000085
ORF7a103I103RATTCGG36AY.260.000085
ORF7a103I103delATT---66AY.3.10.000512
ORF7a103I103IatTatC66AY.440.000037
ORF7a103I103VAttGtt66AY.46.60.000433
ORF7a103I103delATT---66B.1.1.3180.001811
ORF7a103I103delATT---66B.1.1600.000187
ORF7a103I103del1Att-tt66B.1.1770.000079
ORF7a103I103delATT---66B.1.5960.000523
ORF7a103I103FAttTtt66B.1.617.20.000023
ORF7a103I103delATT---66B.1.80.011834
ORF7a103I103VAttGtt66B.120.038462
ORF7a103I103VAttGtt66P.10.000095
ORF7a103I103delATT---66P.1.150.001394
ORF7a103I103CATtTGt55All0.000001
ORF7a103I103del2aTTa--55AY.1000.00023
ORF7a103I103VAttGtt55AY.1030.000031
ORF7a103I103del1Att-tt55AY.1200.000186
ORF7a103I103TaTtaCt55AY.250.00003
ORF7a103I103IatTatC55AY.260.000142
ORF7a103I103delATT---55AY.270.000324
ORF7a103I103delATT---55AY.300.001979
ORF7a103I103del1Att-tt55AY.390.000124
ORF7a103I103del1Att-tt55AY.70.00098
ORF7a103I103SaTtaGt55AY.700.001043
ORF7a103I103delATT---55AY.720.006803
ORF7a103I103delATT---55AY.790.006053
ORF7a103I103FAttTtt55B0.000639
ORF7a103I103delATT---55B.1.1.4860.007886
ORF7a103I103KaTTaAA55B.1.1.70.000004
ORF7a103I103SaTtaGt55B.1.1.70.000004
ORF7a103I103LAtTTtA35B.1.1.70.000003
ORF7a103I103LAttCtt25B.1.1.70.000002
ORF7a103I103delATT---55B.1.177.600.001092
ORF7a103I103delATT---55B.1.258.170.00052
ORF7a103I103delATT---55B.1.360.00073
ORF7a103I103delATT---55B.1.4220.004062
ORF7a103I103del1Att-tt55C.370.00058
ORF7a103I103delATT---55P.1.70.001596
ORF7a103I103delATT---55P.20.000933
ORF7a103I103IatTatA440.222222
ORF7a103I103WATTTGG44All0.000001
ORF7a103I103VAttGtt44AY.1130.00057
ORF7a103I103delATT---44AY.1140.000924
ORF7a103I103delATT---44AY.1170.000338
ORF7a103I103delATT---44AY.130.000644
ORF7a103I103del2aTTa--44AY.140.000352
ORF7a103I103delATT---44AY.190.004561
ORF7a103I103del1Att-tt44AY.200.000155
ORF7a103I103delATT---44AY.210.00759
ORF7a103I103FAttTtt44AY.260.000113
ORF7a103I103del2aTTa--44AY.290.000063
ORF7a103I103del1Att-tt44AY.290.000063
ORF7a103I103delATT---44AY.350.000932
ORF7a103I103TaTtaCt44AY.390.000099
ORF7a103I103del1Att-tt44AY.4.20.000087
ORF7a103I103delATT---44AY.4.50.00043
ORF7a103I103FAttTtt44AY.420.000161
ORF7a103I103VAttGtt44AY.430.000018
ORF7a103I103FAttTtt44AY.430.000018
ORF7a103I103VAttGtt44AY.440.000024
ORF7a103I103FAttTtt44AY.46.50.000794
ORF7a103I103delATT---44AY.540.000381
ORF7a103I103delATT---44AY.7.10.000451
ORF7a103I103del2aTTa--44AY.840.00175
ORF7a103I103del2aTTa--44AY.980.000316
ORF7a103I103IatTatA34B.10.000027
ORF7a103I103IatTatC14B.10.000009
ORF7a103I103delATT---44B.1.1.280.001245
ORF7a103I103TaTtaCt44B.1.1.2840.00043
ORF7a103I103NaTtaAt44B.1.1.70.000004
ORF7a103I103del1Att-tt44B.1.1600.000125
ORF7a103I103VAttGtt44B.1.1770.000053
ORF7a103I103delATT---44B.1.177.70.000659
ORF7a103I103delATT---44B.1.177.860.000734
ORF7a103I103LAttCtt44B.1.20.000035
ORF7a103I103IatTatA34B.1.20.000026
ORF7a103I103IatTatC14B.1.20.000009
ORF7a103I103delATT---44B.1.2430.000278
ORF7a103I103delATT---44B.1.2870.121212
ORF7a103I103delATT---44B.1.6190.003484
ORF7a103I103IatTatC44B.1.621.10.002023
ORF7a103I103delATT---44B.1.6280.001409
ORF7a103I103delATT---44B.1.6370.000292
ORF7a103I103delATT---44N.70.117647
ORF7a103I103FAttTtt44P.10.000063
ORF7a103I103delATT---44Q.40.001819
ORF7a103I103NaTtaAt330.166667
ORF7a103I103KaTTaAA330.166667
ORF7a103I103LAtTCtA130.055556
ORF7a103I103LAtTTtA130.055556
ORF7a103I103LAttCtt130.055556
ORF7a103I103SaTtaGt33AY.1030.000019
ORF7a103I103delATT---33AY.1050.001929
ORF7a103I103delATT---33AY.160.001139
ORF7a103I103delATT---33AY.240.001293
ORF7a103I103VAttGtt33AY.250.000018
ORF7a103I103LAtTCtG13AY.250.000006
ORF7a103I103LAtTTtG13AY.250.000006
ORF7a103I103LAttCtt13AY.250.000006
ORF7a103I103WATTTGG33AY.260.000085
ORF7a103I103CATtTGt33AY.260.000085
ORF7a103I103KaTTaAA33AY.290.000047
ORF7a103I103VAttGtt33AY.290.000047
ORF7a103I103TaTtaCt33AY.29.10.000662
ORF7a103I103del2aTTa--33AY.30.00003
ORF7a103I103delATT---33AY.360.000445
ORF7a103I103delATT---33AY.380.001498
ORF7a103I103del2aTTa--33AY.39.10.000119
ORF7a103I103del2aTTa--33AY.4.20.000065
ORF7a103I103LAttCtt33AY.430.000013
ORF7a103I103delATT---33AY.450.000365
ORF7a103I103del1Att-tt33AY.450.000365
ORF7a103I103del2aTTa--33AY.540.000286
ORF7a103I103delATT---33AY.570.001969
ORF7a103I103delATT---33AY.610.000314
ORF7a103I103delATT---33AY.730.001996
ORF7a103I103delATT---33AY.9.10.000251
ORF7a103I103del1Att-tt33AY.980.000237
ORF7a103I103delATT---33AY.990.003148
ORF7a103I103del1Att-tt33AY.99.20.000276
ORF7a103I103IatTatA33B.1.10.000054
ORF7a103I103del2aTTa--33B.1.10.000054
ORF7a103I103delATT---33B.1.1.580.016129
ORF7a103I103delATT---33B.1.130.007126
ORF7a103I103delATT---33B.1.177.210.000229
ORF7a103I103delATT---33B.1.177.570.000843
ORF7a103I103FAttTtt33B.1.3510.000089
ORF7a103I103delATT---33B.1.351.20.000908
ORF7a103I103delATT---33B.1.3890.003006
ORF7a103I103delATT---33B.1.4090.002344
ORF7a103I103VAttGtt33B.1.617.20.000011
ORF7a103I103SaTtaGt33B.1.617.20.000011
ORF7a103I103delATT---33B.1.6260.017143
ORF7a103I103VAttGtt33P.1.140.000143
ORF7a103I103delATT---33Q.10.000379
ORF7a103I103delATT---33Q.30.000435
ORF7a103I103delATT---220.111111
ORF7a103I103delATT---22A.2.50.000998
ORF7a103I103delATT---22A.280.005291
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ORF7a103I103TaTtaCt22AY.1020.000053
ORF7a103I103IatTatC22AY.1030.000012
ORF7a103I103delATT---22AY.1080.002205
ORF7a103I103del1Att-tt22AY.1090.001479
ORF7a103I103del2aTTa--22AY.1100.000225
ORF7a103I103del1Att-tt22AY.1110.000366
ORF7a103I103TaTtaCt22AY.1160.000574
ORF7a103I103delATT---22AY.116.10.000623
ORF7a103I103del2aTTa--22AY.1190.000071
ORF7a103I103delATT---22AY.120.000632
ORF7a103I103VAttGtt22AY.120.10.000642
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ORF7a103I103del2aTTa--22AY.16.10.00094
ORF7a103I103RATTCGG12AY.250.000006
ORF7a103I103RATtCGt12AY.250.000006
ORF7a103I103FAttTtt22AY.330.000134
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ORF7a103I103MatTatG22AY.40.000003
ORF7a103I103SaTtaGt22AY.40.000003
ORF7a103I103FAttTtt22AY.4.20.000043
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ORF7a103I103SaTtaGt22AY.430.000009
ORF7a103I103FAttTtt22AY.440.000012
ORF7a103I103delATT---22AY.46.50.000397
ORF7a103I103LAttCtt22AY.470.000062
ORF7a103I103del1Att-tt22AY.5.30.000675
ORF7a103I103FAttTtt22AY.540.000191
ORF7a103I103delATT---22AY.600.001876
ORF7a103I103del1Att-tt22AY.610.00021
ORF7a103I103IatTatC22AY.750.000112
ORF7a103I103FAttTtt22AY.750.000112
ORF7a103I103IatTatC22AY.840.000875
ORF7a103I103delATT---22AY.850.000854
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ORF7a103I103delATT---22AY.930.000546
ORF7a103I103delATT---22AY.980.000158
ORF7a103I103VAttGtt22AY.99.20.000184
ORF7a103I103delATT---22AZ.10.001735
ORF7a103I103delATT---22AZ.60.016807
ORF7a103I103delATT---22B0.000256
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ORF7a103I103FAttTtt22B.10.000018
ORF7a103I103delATT---22B.1.1.1550.142857
ORF7a103I103del1Att-tt22B.1.1.2140.000111
ORF7a103I103VAttGtt22B.1.1.2160.001781
ORF7a103I103delATT---22B.1.1.330.000842
ORF7a103I103del1Att-tt22B.1.1.3480.001592
ORF7a103I103FAttTtt22B.1.1.440.004819
ORF7a103I103delATT---22B.1.1.4490.045455
ORF7a103I103FAttTtt22B.1.1.5190.000079
ORF7a103I103delATT---22B.1.1.530.027397
ORF7a103I103delATT---22B.1.1.630.000772
ORF7a103I103del2aTTa--22B.1.1770.000026
ORF7a103I103delATT---22B.1.177.450.000762
ORF7a103I103VAttGtt22B.1.177.820.000955
ORF7a103I103del2aTTa--22B.1.20.000018
ORF7a103I103MatTatG22B.1.20.000018
ORF7a103I103TaTtaCt22B.1.20.000018
ORF7a103I103delATT---22B.1.214.20.001199
ORF7a103I103NaTtaAt22B.1.2210.000142
ORF7a103I103delATT---22B.1.2580.000133
ORF7a103I103delATT---22B.1.258.110.000793
ORF7a103I103delATT---22B.1.3110.000549
ORF7a103I103delATT---22B.1.3500.005865
ORF7a103I103VAttGtt22B.1.3510.000059
ORF7a103I103VAttGtt22B.1.351.50.001199
ORF7a103I103del1Att-tt22B.1.4270.000101
ORF7a103I103del1Att-tt22B.1.4290.000047
ORF7a103I103delATT---22B.1.438.10.000215
ORF7a103I103delATT---22B.1.466.20.000782
ORF7a103I103SaTtaGt22B.1.5260.000047
ORF7a103I103VAttGtt22B.1.5260.000047
ORF7a103I103del1Att-tt22B.1.5750.000607
ORF7a103I103delATT---22B.1.5750.000607
ORF7a103I103delATT---22B.1.5770.001375
ORF7a103I103delATT---22B.1.5950.000522
ORF7a103I103del1Att-tt22B.1.5950.000522
ORF7a103I103delATT---22B.1.6120.005305
ORF7a103I103delATT---22B.1.617.10.000258
ORF7a103I103del1Att-tt22B.1.617.10.000258
ORF7a103I103del2aTTa--22B.1.6210.000177
ORF7a103I103FAttTtt22B.1.6210.000177
ORF7a103I103delATT---22B.1.621.10.001012
ORF7a103I103SaTtaGt22B.1.6370.000146
ORF7a103I103VAttGtt22B.1.6370.000146
ORF7a103I103delATT---22C.1.20.008511
ORF7a103I103del2aTTa--22C.370.000232
ORF7a103I103delATT---22N.50.003534
ORF7a103I103IatTatA22P.10.000032
ORF7a103I103del1Att-tt22P.1.170.000324
ORF7a103I103delATT---22P.1.170.000324
ORF7a103I103delATT---22R.10.00018
ORF7a103I103XATTTAA110.055556
ORF7a103I103YATtTAt110.055556
ORF7a103I103QATTCAA110.055556
ORF7a103I103FAttTtt110.055556
ORF7a103I103HATtCAt110.055556
ORF7a103I103delATT---11A0.000387
ORF7a103I103delATT---11A.10.000282
ORF7a103I103VAttGtt11A.2.20.001689
ORF7a103I103delATT---11A.2.20.001689
ORF7a103I103del1Att-tt11A.210.00277
ORF7a103I103delATT---11A.230.010526
ORF7a103I103VAttGtt11AE.30.032258
ORF7a103I103delATT---11AH.30.003802
ORF7a103I103HATtCAt11All0
ORF7a103I103QATTCAA11All0
ORF7a103I103XATTTAA11All0
ORF7a103I103delATT---11AW.10.003049
ORF7a103I103del1Att-tt11AY.100.00053
ORF7a103I103delATT---11AY.100.00053
ORF7a103I103IatTatC11AY.1000.000046
ORF7a103I103VAttGtt11AY.1020.000027
ORF7a103I103FAttTtt11AY.1020.000027
ORF7a103I103del2aTTa--11AY.1020.000027
ORF7a103I103delATT---11AY.1060.000335
ORF7a103I103delATT---11AY.1070.000466
ORF7a103I103del1Att-tt11AY.110.001339
ORF7a103I103delATT---11AY.1110.000183
ORF7a103I103del1Att-tt11AY.1140.000231
ORF7a103I103del2aTTa--11AY.1160.000287
ORF7a103I103VAttGtt11AY.1160.000287
ORF7a103I103FAttTtt11AY.1170.000085
ORF7a103I103FAttTtt11AY.120.000316
ORF7a103I103FAttTtt11AY.1200.000037
ORF7a103I103del2aTTa--11AY.1200.000037
ORF7a103I103FAttTtt11AY.120.10.000321
ORF7a103I103del1Att-tt11AY.1210.000135
ORF7a103I103del1Att-tt11AY.140.000088
ORF7a103I103del2aTTa--11AY.20.000356
ORF7a103I103TaTtaCt11AY.20.000356
ORF7a103I103FAttTtt11AY.200.000039
ORF7a103I103del1Att-tt11AY.230.00007
ORF7a103I103TaTtaCt11AY.230.00007
ORF7a103I103VAttGtt11AY.230.00007
ORF7a103I103IatTatC11AY.23.10.000417
ORF7a103I103WATTTGG11AY.250.000006
ORF7a103I103SaTtaGt11AY.250.000006
ORF7a103I103CATtTGt11AY.250.000006
ORF7a103I103TaTtaCt11AY.260.000028
ORF7a103I103del2aTTa--11AY.260.000028
ORF7a103I103VAttGtt11AY.280.00189
ORF7a103I103FAttTtt11AY.290.000016
ORF7a103I103TaTtaCt11AY.290.000016
ORF7a103I103IatTatC11AY.30.00001
ORF7a103I103VAttGtt11AY.30.00001
ORF7a103I103VAttGtt11AY.300.000396
ORF7a103I103FAttTtt11AY.300.000396
ORF7a103I103IatTatC11AY.320.000532
ORF7a103I103VAttGtt11AY.330.000067
ORF7a103I103del1Att-tt11AY.340.000097
ORF7a103I103IatTatC11AY.340.000097
ORF7a103I103del2aTTa--11AY.340.000097
ORF7a103I103IatTatC11AY.34.10.00051
ORF7a103I103del2aTTa--11AY.350.000233
ORF7a103I103delATT---11AY.370.000316
ORF7a103I103VAtTGtG11AY.390.000025
ORF7a103I103del1Att-tt11AY.39.10.00004
ORF7a103I103IatTatC11AY.4.20.000022
ORF7a103I103VAttGtt11AY.4.20.000022
ORF7a103I103FAttTtt11AY.4.50.000107
ORF7a103I103MatTatG11AY.4.50.000107
ORF7a103I103IatTatA11AY.420.00004
ORF7a103I103CATtTGt11AY.440.000006
ORF7a103I103SaTtaGt11AY.440.000006
ORF7a103I103TaTtaCt11AY.440.000006
ORF7a103I103VAttGtt11AY.450.000122
ORF7a103I103del2aTTa--11AY.460.000104
ORF7a103I103del1Att-tt11AY.46.40.000165
ORF7a103I103del1Att-tt11AY.46.60.000072
ORF7a103I103del2aTTa--11AY.46.60.000072
ORF7a103I103SaTtaGt11AY.470.000031
ORF7a103I103TaTtaCt11AY.470.000031
ORF7a103I103del1Att-tt11AY.480.000465
ORF7a103I103delATT---11AY.490.003195
ORF7a103I103VAttGtt11AY.50.000021
ORF7a103I103TaTtaCt11AY.5.30.000337
ORF7a103I103delATT---11AY.5.30.000337
ORF7a103I103LAttCtt11AY.5.40.000277
ORF7a103I103IatTatA11AY.5.40.000277
ORF7a103I103delATT---11AY.5.40.000277
ORF7a103I103VAttGtt11AY.520.000814
ORF7a103I103LAttCtt11AY.520.000814
ORF7a103I103del2aTTa--11AY.530.000288
ORF7a103I103del1Att-tt11AY.580.000907
ORF7a103I103del1Att-tt11AY.590.00053
ORF7a103I103del2aTTa--11AY.60.000041
ORF7a103I103del2aTTa--11AY.610.000105
ORF7a103I103FAttTtt11AY.610.000105
ORF7a103I103del1Att-tt11AY.620.000436
ORF7a103I103del1Att-tt11AY.640.000595
ORF7a103I103VAttGtt11AY.650.000533
ORF7a103I103VAttGtt11AY.690.000187
ORF7a103I103delATT---11AY.690.000187
ORF7a103I103VAttGtt11AY.70.000196
ORF7a103I103FAttTtt11AY.7.10.000113
ORF7a103I103del2aTTa--11AY.700.000209
ORF7a103I103del1Att-tt11AY.700.000209
ORF7a103I103del1Att-tt11AY.740.000116
ORF7a103I103delATT---11AY.75.10.00018
ORF7a103I103delATT---11AY.830.001724
ORF7a103I103delATT---11AY.870.000833
ORF7a103I103KaTTaAA11AY.9.20.000037
ORF7a103I103FAttTtt11AY.9.20.000037
ORF7a103I103delATT---11AY.920.000287
ORF7a103I103delATT---11AY.960.002075
ORF7a103I103del1Att-tt11AY.98.10.000048
ORF7a103I103del1Att-tt11AY.990.001049
ORF7a103I103delATT---11AZ.20.000821
ORF7a103I103TaTtaCt11B.10.000009
ORF7a103I103LAttCtt11B.1.10.000018
ORF7a103I103NaTtaAt11B.1.10.000018
ORF7a103I103FAttTtt11B.1.10.000018
ORF7a103I103del2aTTa--11B.1.1.10.000327
ORF7a103I103delATT---11B.1.1.1210.002427
ORF7a103I103delATT---11B.1.1.1320.014925
ORF7a103I103delATT---11B.1.1.1410.002012
ORF7a103I103LAttCtt11B.1.1.1700.001247
ORF7a103I103del1Att-tt11B.1.1.1700.001247
ORF7a103I103delATT---11B.1.1.1890.001513
ORF7a103I103delATT---11B.1.1.2160.00089
ORF7a103I103delATT---11B.1.1.2580.003257
ORF7a103I103delATT---11B.1.1.2650.003155
ORF7a103I103del1Att-tt11B.1.1.2770.000759
ORF7a103I103delATT---11B.1.1.2800.003086
ORF7a103I103del1Att-tt11B.1.1.2840.000107
ORF7a103I103delATT---11B.1.1.2940.001266
ORF7a103I103delATT---11B.1.1.3120.001912
ORF7a103I103delATT---11B.1.1.3160.000925
ORF7a103I103delATT---11B.1.1.3170.000412
ORF7a103I103FAttTtt11B.1.1.3170.000412
ORF7a103I103VAttGtt11B.1.1.3170.000412
ORF7a103I103delATT---11B.1.1.3310.011628
ORF7a103I103delATT---11B.1.1.3690.000446
ORF7a103I103FAttTtt11B.1.1.3980.003226
ORF7a103I103del1Att-tt11B.1.1.3980.003226
ORF7a103I103delATT---11B.1.1.4110.014706
ORF7a103I103MatTatG11B.1.1.4110.014706
ORF7a103I103IatTatA11B.1.1.4110.014706
ORF7a103I103VAttGtt11B.1.1.4160.000905
ORF7a103I103delATT---11B.1.1.4340.000349
ORF7a103I103delATT---11B.1.1.4370.010417
ORF7a103I103delATT---11B.1.1.4480.002033
ORF7a103I103delATT---11B.1.1.500.000679
ORF7a103I103del1Att-tt11B.1.1.5190.00004
ORF7a103I103del2aTTa--11B.1.1.5190.00004
ORF7a103I103delATT---11B.1.1.700.000341
ORF7a103I103delATT---11B.1.1150.021739
ORF7a103I103VAttGtt11B.1.1260.001276
ORF7a103I103delATT---11B.1.1390.000733
ORF7a103I103FAttTtt11B.1.1570.002985
ORF7a103I103IatTatC11B.1.1600.000031
ORF7a103I103del2aTTa--11B.1.1600.000031
ORF7a103I103del1Att-tt11B.1.160.160.000929
ORF7a103I103del2aTTa--11B.1.160.280.002924
ORF7a103I103LAttCtt11B.1.160.320.004292
ORF7a103I103delATT---11B.1.160.70.002079
ORF7a103I103IatTatC11B.1.1770.000013
ORF7a103I103del1Att-tt11B.1.177.120.000152
ORF7a103I103del1Att-tt11B.1.177.160.000664
ORF7a103I103delATT---11B.1.177.160.000664
ORF7a103I103VAttGtt11B.1.177.40.000211
ORF7a103I103FAttTtt11B.1.177.40.000211
ORF7a103I103delATT---11B.1.177.40.000211
ORF7a103I103del1Att-tt11B.1.177.430.001477
ORF7a103I103delATT---11B.1.177.440.000519
ORF7a103I103delATT---11B.1.177.500.004695
ORF7a103I103delATT---11B.1.177.540.000606
ORF7a103I103VAtTGtA11B.1.177.630.002703
ORF7a103I103IatTatA11B.1.177.670.007634
ORF7a103I103delATT---11B.1.177.690.001484
ORF7a103I103IatTatC11B.1.177.70.000165
ORF7a103I103FAttTtt11B.1.177.800.001912
ORF7a103I103delATT---11B.1.177.800.001912
ORF7a103I103FAttTtt11B.1.177.860.000183
ORF7a103I103delATT---11B.1.177.870.000728
ORF7a103I103NaTtaAt11B.1.177.90.001332
ORF7a103I103FAttTtt11B.1.20.000009
ORF7a103I103SaTtaGt11B.1.20.000009
ORF7a103I103delATT---11B.1.2180.005155
ORF7a103I103IatTatA11B.1.2340.000132
ORF7a103I103VAttGtt11B.1.2340.000132
ORF7a103I103delATT---11B.1.2350.002519
ORF7a103I103FAttTtt11B.1.2580.000067
ORF7a103I103FAttTtt11B.1.258.110.000396
ORF7a103I103del2aTTa--11B.1.258.170.000104
ORF7a103I103IatTatA11B.1.258.170.000104
ORF7a103I103MatTatG11B.1.258.90.005
ORF7a103I103delATT---11B.1.2650.001271
ORF7a103I103del1Att-tt11B.1.3060.005714
ORF7a103I103delATT---11B.1.3060.005714
ORF7a103I103delATT---11B.1.3200.001245
ORF7a103I103FAttTtt11B.1.3200.001245
ORF7a103I103VAttGtt11B.1.3200.001245
ORF7a103I103del1Att-tt11B.1.3510.00003
ORF7a103I103del2aTTa--11B.1.351.20.000303
ORF7a103I103delATT---11B.1.3560.001727
ORF7a103I103del2aTTa--11B.1.360.000146
ORF7a103I103IatTatA11B.1.360.000146
ORF7a103I103delATT---11B.1.36.100.004785
ORF7a103I103del1Att-tt11B.1.36.170.000494
ORF7a103I103delATT---11B.1.36.200.016949
ORF7a103I103delATT---11B.1.36.290.000517
ORF7a103I103IatTatC11B.1.36.80.001
ORF7a103I103delATT---11B.1.3620.001541
ORF7a103I103delATT---11B.1.3710.001122
ORF7a103I103delATT---11B.1.3750.00082
ORF7a103I103NaTtaAt11B.1.4160.001269
ORF7a103I103FAttTtt11B.1.4220.000812
ORF7a103I103FAttTtt11B.1.4270.00005
ORF7a103I103TaTtaCt11B.1.4270.00005
ORF7a103I103LAttCtt11B.1.4290.000024
ORF7a103I103del2aTTa--11B.1.4290.000024
ORF7a103I103delATT---11B.1.4590.004082
ORF7a103I103YATtTAt11B.1.466.20.000391
ORF7a103I103IatTatC11B.1.466.20.000391
ORF7a103I103delATT---11B.1.4680.005714
ORF7a103I103VAttGtt11B.1.4690.00361
ORF7a103I103delATT---11B.1.4690.00361
ORF7a103I103delATT---11B.1.4700.001404
ORF7a103I103delATT---11B.1.5030.002488
ORF7a103I103del1Att-tt11B.1.5170.000427
ORF7a103I103delATT---11B.1.5170.000427
ORF7a103I103del2aTTa--11B.1.5170.000427
ORF7a103I103LAttCtt11B.1.5250.000113
ORF7a103I103delATT---11B.1.5270.003704
ORF7a103I103IatTatA11B.1.5670.003333
ORF7a103I103delATT---11B.1.5850.027778
ORF7a103I103del1Att-tt11B.1.5880.00091
ORF7a103I103IatTatA11B.1.5950.000261
ORF7a103I103IatTatA11B.1.5960.000087
ORF7a103I103VAttGtt11B.1.596.10.009346
ORF7a103I103del2aTTa--11B.1.617.10.000129
ORF7a103I103LAttCtt11B.1.617.20.000004
ORF7a103I103LAttCtt11B.1.617.30.002985
ORF7a103I103VAttGtt11B.1.6190.000871
ORF7a103I103delATT---11B.1.6200.000946
ORF7a103I103SaTtaGt11B.1.6210.000089
ORF7a103I103IatTatA11B.1.6210.000089
ORF7a103I103del1Att-tt11B.1.6370.000073
ORF7a103I103LAttCtt11B.1.930.000934
ORF7a103I103VAttGtt11B.30.000831
ORF7a103I103delATT---11B.30.000831
ORF7a103I103delATT---11B.400.000364
ORF7a103I103VAttGtt11C.160.00106
ORF7a103I103delATT---11C.360.000911
ORF7a103I103FAttTtt11C.370.000116
ORF7a103I103delATT---11N.60.007092
ORF7a103I103TaTtaCt11P.10.000016
ORF7a103I103delATT---11P.1.10.000318
ORF7a103I103delATT---11P.1.120.000484
ORF7a103I103del1Att-tt11P.1.140.000048
ORF7a103I103del2aTTa--11P.1.140.000048
ORF7a103I103IatTatC11P.1.140.000048
ORF7a103I103delATT---11P.1.160.000374
ORF7a103I103delATT---11P.1.20.001156
ORF7a103I103delATT---11P.1.40.000977
ORF7a103I103SaTtaGt11P.1.70.000319
ORF7a103I103delATT---11Q.20.000613
ORF7a103I103TaTtaCt11Q.40.000455
ORF7a103I103del1Att-tt11R.10.00009
ORF7a103I103TaTtaCt11R.10.00009
ORF7a103I103delATT---11W.40.001351
ORF7a103I103delATT---11Y.10.012821