CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF7a : CodonNum = 101

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF7a101F101deldelTTT---97019701127694-27696
ORF7a101F101LnonsynTttCtt4513120.69179627694-27696
ORF7a101F101LnonsynttTttG451800.17738427694-27696
ORF7a101F101LnonsynttTttA451580.12860327694-27696
ORF7a101F101LnonsynTtTCtC45110.0022172927694-27696
ORF7a101F101del1delTtt-tt3181970.61949727694-27696
ORF7a101F101del1delttTtt-3181120.35220127694-27696
ORF7a101F101del1delTTT-NN31840.012578627694-27696
ORF7a101F101del1deltTTtC-31820.0062893127694-27696
ORF7a101F101del1delTTT-CG31820.0062893127694-27696
ORF7a101F101del1delTtT-tG31810.0031446527694-27696
ORF7a101F101CnonsyntTttGt2021940.96039627694-27696
ORF7a101F101CnonsyntTTtGC20280.03960427694-27696
ORF7a101F101del2delTTt--t107670.62616827694-27696
ORF7a101F101del2deltTTt--107370.34579427694-27696
ORF7a101F101del2delTTT--N10730.028037427694-27696
ORF7a101F101FsynttTttC9494127694-27696
ORF7a101F101SnonsyntTttCt80710.887527694-27696
ORF7a101F101SnonsyntTTtCC8050.062527694-27696
ORF7a101F101SnonsyntTTtCG8040.0527694-27696
ORF7a101F101InonsynTttAtt41400.9756127694-27696
ORF7a101F101InonsynTtTAtA4110.024390227694-27696
ORF7a101F101VnonsynTttGtt39380.97435927694-27696
ORF7a101F101VnonsynTtTGtA3910.02564127694-27696
ORF7a101F101YnonsyntTttAt650.83333327694-27696
ORF7a101F101YnonsyntTTtAC610.16666727694-27696
ORF7a101F101XnonsyntTTtAA430.7527694-27696
ORF7a101F101XnonsyntTTtGA410.2527694-27696
ORF7a101F101HnonsynTTtCAt320.66666727694-27696
ORF7a101F101TnonsynTTtACt320.66666727694-27696
ORF7a101F101TnonsynTTTACA310.33333327694-27696
ORF7a101F101HnonsynTTTCAC310.33333327694-27696
ORF7a101F101WnonsyntTTtGG22127694-27696
ORF7a101F101NnonsynTTtAAt22127694-27696
ORF7a101F101AnonsynTTTGCC210.527694-27696
ORF7a101F101AnonsynTTtGCt210.527694-27696
ORF7a101F101EnonsynTTTGAA11127694-27696
ORF7a101F101DnonsynTTtGAt11127694-27696
ORF7a101F101KnonsynTTTAAA11127694-27696
ORF7a101F101MnonsynTtTAtG11127694-27696
ORF7a101F101RnonsynTTTAGA11127694-27696

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF7a101F101delTTT---97019701All0.001855
ORF7a101F101delTTT---23372337B.1.1.70.002092
ORF7a101F101delTTT---10301030AY.39.1.10.746377
ORF7a101F101delTTT---10011001AY.40.001558
ORF7a101F101delTTT---609609AY.250.003663
ORF7a101F101delTTT---576576B.1.617.20.002169
ORF7a101F101LTttCtt312451All0.00006
ORF7a101F101LttTttG80451All0.000015
ORF7a101F101LttTttA58451All0.000011
ORF7a101F101LTtTCtC1451All0
ORF7a101F101delTTT---343343AY.1020.009094
ORF7a101F101del1Ttt-tt197318All0.000038
ORF7a101F101del1ttTtt-112318All0.000021
ORF7a101F101del1TTT-NN4318All0.000001
ORF7a101F101del1TTT-CG2318All0
ORF7a101F101del1tTTtC-2318All0
ORF7a101F101del1TtT-tG1318All0
ORF7a101F101delTTT---253253AY.750.014174
ORF7a101F101delTTT---248248AY.39.10.009824
ORF7a101F101delTTT---214214AY.440.001303
ORF7a101F101CtTttGt194202All0.000037
ORF7a101F101CtTTtGC8202All0.000002
ORF7a101F101delTTT---178178AY.4.20.003861
ORF7a101F101delTTT---178178AY.430.000789
ORF7a101F101delTTT---159159AY.30.001581
ORF7a101F101delTTT---150150AY.1030.000931
ORF7a101F101delTTT---131131AY.1200.00487
ORF7a101F101CtTttGt123123AY.250.00074
ORF7a101F101del1Ttt-tt122123B.1.6370.008915
ORF7a101F101del1ttTtt-1123B.1.6370.000073
ORF7a101F101LTttCtt73112B.1.1.70.000065
ORF7a101F101LttTttA28112B.1.1.70.000025
ORF7a101F101LttTttG11112B.1.1.70.00001
ORF7a101F101del2TTt--t67107All0.000013
ORF7a101F101del2tTTt--37107All0.000007
ORF7a101F101del2TTT--N3107All0.000001
ORF7a101F101delTTT---107107AY.330.007145
ORF7a101F101FttTttC9494All0.000018
ORF7a101F101delTTT---8585AY.390.0021
ORF7a101F101delTTT---8181B.1.20.000713
ORF7a101F101StTttCt7180All0.000014
ORF7a101F101StTTtCC580All0.000001
ORF7a101F101StTTtCG480All0.000001
ORF7a101F101LTttCtt7378AY.1030.000453
ORF7a101F101LttTttG578AY.1030.000031
ORF7a101F101delTTT---7272AY.290.001136
ORF7a101F101delTTT---7070AY.460.007286
ORF7a101F101delTTT---6868B.1.6280.023961
ORF7a101F101delTTT---6666P.10.00104
ORF7a101F101delTTT---6363AY.46.40.010364
ORF7a101F101delTTT---6363AY.50.001301
ORF7a101F101del2TTt--t4058B.1.1.70.000036
ORF7a101F101del2tTTt--1758B.1.1.70.000015
ORF7a101F101del2TTT--N158B.1.1.70.000001
ORF7a101F101delTTT---5858B.1.5260.001363
ORF7a101F101delTTT---5252AY.260.001472
ORF7a101F101CtTttGt5252AY.7.20.029083
ORF7a101F101delTTT---5252B.1.6210.004603
ORF7a101F101delTTT---4848B.10.00044
ORF7a101F101delTTT---4747B.1.1770.000619
ORF7a101F101delTTT---4545AY.1180.002819
ORF7a101F101delTTT---4444AY.90.002974
ORF7a101F101delTTT---4343AY.70.008428
ORF7a101F101del1Ttt-tt4343C.370.004991
ORF7a101F101ITttAtt4041All0.000008
ORF7a101F101ITtTAtA141All0
ORF7a101F101LTttCtt3740AY.250.000223
ORF7a101F101LttTttG240AY.250.000012
ORF7a101F101LttTttA140AY.250.000006
ORF7a101F101VTttGtt3839All0.000007
ORF7a101F101VTtTGtA139All0
ORF7a101F101delTTT---3939B.1.10.000707
ORF7a101F101delTTT---3636AY.360.005336
ORF7a101F101delTTT---3636AY.470.00112
ORF7a101F101delTTT---3434AY.740.003932
ORF7a101F101delTTT---3232AY.1190.00113
ORF7a101F101FttTttC3232B.1.1.70.000029
ORF7a101F101LTttCtt2829AY.30.000278
ORF7a101F101LttTttA129AY.30.00001
ORF7a101F101delTTT---2626AY.530.007476
ORF7a101F101delTTT---2424AY.420.000966
ORF7a101F101delTTT---2424B.1.1.2140.001331
ORF7a101F101delTTT---2222B.1.1.5190.000874
ORF7a101F101del1ttTtt-2222B.1.1.5190.000874
ORF7a101F101delTTT---2222B.1.3250.151724
ORF7a101F101delTTT---2222B.1.4270.001111
ORF7a101F101delTTT---2121AY.1000.000966
ORF7a101F101del1Ttt-tt1121AY.250.000066
ORF7a101F101del1ttTtt-1021AY.250.00006
ORF7a101F101delTTT---2121AY.7.20.011745
ORF7a101F101delTTT---2121AY.9.10.001758
ORF7a101F101LTttCtt1821B.1.20.000158
ORF7a101F101LttTttG321B.1.20.000026
ORF7a101F101del1ttTtt-1319B.1.1.70.000012
ORF7a101F101del1Ttt-tt419B.1.1.70.000004
ORF7a101F101del1TTT-CG219B.1.1.70.000002
ORF7a101F101delTTT---1919B.1.1600.000593
ORF7a101F101delTTT---1919B.1.3510.000565
ORF7a101F101delTTT---1717AD.20.003722
ORF7a101F101delTTT---1717AY.1210.0023
ORF7a101F101delTTT---1616AY.46.10.016427
ORF7a101F101delTTT---1616AY.60.000658
ORF7a101F101delTTT---1616AY.950.012177
ORF7a101F101del1ttTtt-1616B.10.000147
ORF7a101F101delTTT---1616B.1.1.2220.003264
ORF7a101F101delTTT---1515AY.340.001454
ORF7a101F101LTttCtt915B.1.617.20.000034
ORF7a101F101LttTttG315B.1.617.20.000011
ORF7a101F101LttTttA315B.1.617.20.000011
ORF7a101F101LttTttG914AY.40.000014
ORF7a101F101LTttCtt514AY.40.000008
ORF7a101F101delTTT---1414B.1.1.370.0027
ORF7a101F101delTTT---1414C.370.001625
ORF7a101F101StTttCt1313AY.430.000058
ORF7a101F101delTTT---1212AY.1130.001709
ORF7a101F101delTTT---1111AY.1110.002015
ORF7a101F101delTTT---1111AY.120.10.003531
ORF7a101F101delTTT---1111AY.230.000767
ORF7a101F101delTTT---1111AY.3.10.000938
ORF7a101F101CtTTtGC711AY.40.000011
ORF7a101F101CtTttGt411AY.40.000006
ORF7a101F101delTTT---1111AY.700.002294
ORF7a101F101delTTT---1111AY.9.20.000404
ORF7a101F101delTTT---1111AY.910.008035
ORF7a101F101delTTT---1111AY.98.10.000533
ORF7a101F101VTttGtt1111B.1.1.70.00001
ORF7a101F101delTTT---1111B.1.2340.001451
ORF7a101F101del1ttTtt-811B.1.617.20.00003
ORF7a101F101del1Ttt-tt311B.1.617.20.000011
ORF7a101F101delTTT---1111B.1.6370.000804
ORF7a101F101StTttCt1010AY.1030.000062
ORF7a101F101delTTT---1010AY.850.004272
ORF7a101F101delTTT---1010B.1.1.3180.003018
ORF7a101F101delTTT---1010B.1.2430.000696
ORF7a101F101delTTT---99AY.160.003417
ORF7a101F101del2tTTt--99AY.40.000014
ORF7a101F101LTttCtt69AY.430.000027
ORF7a101F101LttTttA39AY.430.000013
ORF7a101F101delTTT---99AY.99.20.000829
ORF7a101F101StTttCt99B.1.1.70.000008
ORF7a101F101delTTT---88AY.200.000311
ORF7a101F101delTTT---88AY.270.000518
ORF7a101F101del1ttTtt-88AY.40.000012
ORF7a101F101LttTttG78AY.440.000043
ORF7a101F101LttTttA18AY.440.000006
ORF7a101F101ITttAtt88B.1.1.70.000007
ORF7a101F101delTTT---88P.1.150.001859
ORF7a101F101delTTT---88R.10.00072
ORF7a101F101delTTT---77AY.1170.000592
ORF7a101F101StTttCt77AY.1190.000247
ORF7a101F101delTTT---77AY.190.007982
ORF7a101F101StTTtCC47AY.260.000113
ORF7a101F101StTTtCG37AY.260.000085
ORF7a101F101delTTT---77AY.29.10.001544
ORF7a101F101LttTttG67AY.390.000148
ORF7a101F101LttTttA17AY.390.000025
ORF7a101F101delTTT---77AY.540.000667
ORF7a101F101delTTT---77AY.860.005809
ORF7a101F101delTTT---77B0.000895
ORF7a101F101FttTttC77B.10.000064
ORF7a101F101delTTT---77B.1.1.2840.000752
ORF7a101F101delTTT---77B.1.160.160.006506
ORF7a101F101delTTT---77B.1.2210.000497
ORF7a101F101delTTT---77B.1.5250.000792
ORF7a101F101delTTT---77D.20.000525
ORF7a101F101YtTttAt56All0.000001
ORF7a101F101YtTTtAC16All0
ORF7a101F101ITttAtt66AY.1030.000037
ORF7a101F101delTTT---66AY.4.50.000645
ORF7a101F101delTTT---66AY.450.00073
ORF7a101F101delTTT---66AY.46.50.00119
ORF7a101F101delTTT---66AY.680.001642
ORF7a101F101delTTT---66AY.980.000474
ORF7a101F101delTTT---66B.1.177.170.004926
ORF7a101F101LttTttG66B.1.3510.000178
ORF7a101F101delTTT---66B.1.617.10.000774
ORF7a101F101delTTT---66P.1.10.001906
ORF7a101F101delTTT---66Q.80.000989
ORF7a101F101LTttCtt55AY.120.00158
ORF7a101F101delTTT---55AY.140.00044
ORF7a101F101del2tTTt--55AY.250.00003
ORF7a101F101LttTttG35AY.260.000085
ORF7a101F101LTttCtt25AY.260.000057
ORF7a101F101delTTT---55AY.790.006053
ORF7a101F101VTttGtt55AY.9.20.000184
ORF7a101F101CtTttGt55B.1.1.70.000004
ORF7a101F101delTTT---55B.1.177.600.001092
ORF7a101F101del2TTt--t55B.1.20.000044
ORF7a101F101LTttCtt55B.1.2340.00066
ORF7a101F101FttTttC55B.1.3890.00501
ORF7a101F101delTTT---55B.1.4290.000118
ORF7a101F101delTTT---55P.20.000933
ORF7a101F101delTTT---55Q.10.000632
ORF7a101F101LttTttA440.222222
ORF7a101F101XtTTtAA34All0.000001
ORF7a101F101XtTTtGA14All0
ORF7a101F101delTTT---44AY.1050.002572
ORF7a101F101delTTT---44AY.1140.000924
ORF7a101F101StTttCt44AY.1170.000338
ORF7a101F101delTTT---44AY.120.001264
ORF7a101F101del1Ttt-tt44AY.230.000279
ORF7a101F101delTTT---44AY.240.001724
ORF7a101F101StTttCt24AY.250.000012
ORF7a101F101StTTtCG14AY.250.000006
ORF7a101F101StTTtCC14AY.250.000006
ORF7a101F101delTTT---44AY.300.001583
ORF7a101F101delTTT---44AY.350.000932
ORF7a101F101FttTttC44AY.40.000006
ORF7a101F101del1ttTtt-34AY.450.000365
ORF7a101F101del1Ttt-tt14AY.450.000122
ORF7a101F101delTTT---44AY.46.60.000289
ORF7a101F101delTTT---44AY.640.002381
ORF7a101F101delTTT---44AY.7.10.000451
ORF7a101F101delTTT---44AY.75.10.000721
ORF7a101F101VTttGtt44B.10.000037
ORF7a101F101LttTttA44B.1.1.580.021505
ORF7a101F101LTttCtt44B.1.177.760.009975
ORF7a101F101delTTT---44B.1.2580.000266
ORF7a101F101delTTT---44B.1.258.110.001585
ORF7a101F101delTTT---44B.1.258.170.000416
ORF7a101F101delTTT---44B.1.3110.001098
ORF7a101F101delTTT---44N.70.117647
ORF7a101F101delTTT---44P.1.140.000191
ORF7a101F101delTTT---44P.1.70.001277
ORF7a101F101delTTT---44Q.40.001819
ORF7a101F101TTTtACt23All0
ORF7a101F101HTTtCAt23All0
ORF7a101F101HTTTCAC13All0
ORF7a101F101TTTTACA13All0
ORF7a101F101FttTttC33AY.100.00159
ORF7a101F101LttTttG33AY.1000.000138
ORF7a101F101del1ttTtt-33AY.1030.000019
ORF7a101F101delTTT---33AY.1080.003308
ORF7a101F101delTTT---33AY.1160.00086
ORF7a101F101delTTT---33AY.20.001068
ORF7a101F101LttTttG33AY.200.000117
ORF7a101F101FttTttC33AY.250.000018
ORF7a101F101FttTttC33AY.260.000085
ORF7a101F101LttTttG33AY.290.000047
ORF7a101F101del1Ttt-tt23AY.30.00002
ORF7a101F101del1ttTtt-13AY.30.00001
ORF7a101F101delTTT---33AY.370.000948
ORF7a101F101del1tTTtC-23AY.39.1.10.001449
ORF7a101F101del1ttTtt-13AY.39.1.10.000725
ORF7a101F101ITttAtt33AY.430.000013
ORF7a101F101del1ttTtt-33AY.430.000013
ORF7a101F101delTTT---33AY.46.20.001906
ORF7a101F101LttTttA23AY.750.000112
ORF7a101F101LttTttG13AY.750.000056
ORF7a101F101ITttAtt33AY.75.10.000541
ORF7a101F101LTttCtt23AY.980.000158
ORF7a101F101LTtTCtC13AY.980.000079
ORF7a101F101StTttCt33AY.98.10.000145
ORF7a101F101delTTT---33AY.990.003148
ORF7a101F101LTttCtt33B.10.000027
ORF7a101F101del2TTt--t33B.1.10.000054
ORF7a101F101del1ttTtt-23B.1.10.000036
ORF7a101F101del1TTT-NN13B.1.10.000018
ORF7a101F101delTTT---33B.1.1.1700.003741
ORF7a101F101delTTT---33B.1.1.280.000934
ORF7a101F101StTttCt33B.1.1110.003525
ORF7a101F101delTTT---33B.1.130.007126
ORF7a101F101delTTT---33B.1.177.120.000455
ORF7a101F101delTTT---33B.1.177.70.000495
ORF7a101F101delTTT---33B.1.177.860.00055
ORF7a101F101VTttGtt33B.1.2430.000209
ORF7a101F101FttTttC33B.1.3510.000089
ORF7a101F101delTTT---33B.1.351.20.000908
ORF7a101F101delTTT---33B.1.360.000438
ORF7a101F101delTTT---33B.1.36.170.001482
ORF7a101F101delTTT---33B.1.3890.003006
ORF7a101F101del2TTt--t33B.1.4270.000151
ORF7a101F101delTTT---33B.1.5950.000783
ORF7a101F101delTTT---33B.1.5960.000261
ORF7a101F101LttTttG33B.1.5960.000261
ORF7a101F101TTTtACt23B.1.617.20.000008
ORF7a101F101TTTTACA13B.1.617.20.000004
ORF7a101F101delTTT---33B.1.6260.017143
ORF7a101F101delTTT---33B.1.6340.010274
ORF7a101F101delTTT---33B.310.011194
ORF7a101F101LTttCtt13C.370.000116
ORF7a101F101LttTttG13C.370.000116
ORF7a101F101LttTttA13C.370.000116
ORF7a101F101delTTT---33P.1.120.001452
ORF7a101F101LTttCtt33P.1.140.000143
ORF7a101F101LttTttA23Q.10.000253
ORF7a101F101LTttCtt13Q.10.000126
ORF7a101F101delTTT---33Q.30.000435
ORF7a101F101delTTT---220.111111
ORF7a101F101VTttGtt120.055556
ORF7a101F101ITttAtt120.055556
ORF7a101F101ITtTAtA120.055556
ORF7a101F101VTtTGtA120.055556
ORF7a101F101delTTT---22A.2.50.000998
ORF7a101F101delTTT---22A.280.005291
ORF7a101F101NTTtAAt22All0
ORF7a101F101WtTTtGG22All0
ORF7a101F101ATTTGCC12All0
ORF7a101F101ATTtGCt12All0
ORF7a101F101delTTT---22AY.1010.000981
ORF7a101F101VTttGtt22AY.1030.000012
ORF7a101F101CtTttGt22AY.1030.000012
ORF7a101F101delTTT---22AY.1040.003968
ORF7a101F101delTTT---22AY.1090.001479
ORF7a101F101LttTttG22AY.1140.000462
ORF7a101F101LttTttG22AY.1190.000071
ORF7a101F101LttTttG12AY.230.00007
ORF7a101F101LTttCtt12AY.230.00007
ORF7a101F101ITttAtt22AY.250.000012
ORF7a101F101del1ttTtt-22AY.260.000057
ORF7a101F101del1TtT-tG12AY.290.000016
ORF7a101F101del1ttTtt-12AY.290.000016
ORF7a101F101LTttCtt22AY.340.000194
ORF7a101F101LTttCtt22AY.360.000296
ORF7a101F101LTttCtt22AY.39.10.000079
ORF7a101F101del1TTT-NN12AY.4.20.000022
ORF7a101F101del1ttTtt-12AY.4.20.000022
ORF7a101F101del1Ttt-tt22AY.420.00008
ORF7a101F101del1ttTtt-22AY.470.000062
ORF7a101F101delTTT---22AY.480.00093
ORF7a101F101LTttCtt22AY.50.000041
ORF7a101F101delTTT---22AY.5.30.000675
ORF7a101F101delTTT---22AY.5.40.000553
ORF7a101F101delTTT---22AY.590.001059
ORF7a101F101delTTT---22AY.600.001876
ORF7a101F101ITttAtt22AY.740.000231
ORF7a101F101delTTT---22AY.770.002255
ORF7a101F101delTTT---22AY.80.001212
ORF7a101F101delTTT---22AY.840.000875
ORF7a101F101LTttCtt22AY.850.000854
ORF7a101F101delTTT---22AY.870.001665
ORF7a101F101delTTT---22AY.920.000575
ORF7a101F101YtTttAt12AY.980.000079
ORF7a101F101HTTTCAC12AY.980.000079
ORF7a101F101HTTtCAt12AY.980.000079
ORF7a101F101YtTTtAC12AY.980.000079
ORF7a101F101del1ttTtt-22AY.99.20.000184
ORF7a101F101delTTT---22AZ.60.016807
ORF7a101F101StTttCt22B.10.000018
ORF7a101F101LttTttA12B.1.10.000018
ORF7a101F101LTttCtt12B.1.10.000018
ORF7a101F101delTTT---22B.1.1.10.000653
ORF7a101F101del2TTt--t22B.1.1.1530.002191
ORF7a101F101delTTT---22B.1.1.1550.142857
ORF7a101F101FttTttC22B.1.1.2140.000111
ORF7a101F101delTTT---22B.1.1.2320.00363
ORF7a101F101FttTttC22B.1.1.2840.000215
ORF7a101F101delTTT---22B.1.1.330.000842
ORF7a101F101delTTT---22B.1.1.3480.001592
ORF7a101F101delTTT---22B.1.1.4490.045455
ORF7a101F101LTttCtt22B.1.1.5190.000079
ORF7a101F101XtTTtAA22B.1.1.70.000002
ORF7a101F101LttTttG12B.1.1770.000013
ORF7a101F101LTttCtt12B.1.1770.000013
ORF7a101F101delTTT---22B.1.177.150.001262
ORF7a101F101delTTT---22B.1.177.210.000153
ORF7a101F101WtTTtGG22B.1.177.210.000153
ORF7a101F101delTTT---22B.1.177.570.000562
ORF7a101F101VTttGtt22B.1.177.600.000437
ORF7a101F101delTTT---22B.1.177.800.003824
ORF7a101F101FttTttC22B.1.20.000018
ORF7a101F101delTTT---22B.1.2400.000431
ORF7a101F101delTTT---22B.1.3060.011429
ORF7a101F101delTTT---22B.1.3500.005865
ORF7a101F101VTttGtt22B.1.3510.000059
ORF7a101F101del2TTt--t22B.1.36.270.001527
ORF7a101F101delTTT---22B.1.4000.000858
ORF7a101F101del2tTTt--22B.1.4290.000047
ORF7a101F101FttTttC22B.1.4290.000047
ORF7a101F101delTTT---22B.1.5750.000607
ORF7a101F101delTTT---22B.1.5770.001375
ORF7a101F101delTTT---22B.1.6120.005305
ORF7a101F101delTTT---22B.1.621.10.001012
ORF7a101F101del1ttTtt-22B.1.6280.000705
ORF7a101F101VTttGtt22B.1.6370.000146
ORF7a101F101delTTT---22B.4.50.02381
ORF7a101F101delTTT---22B.400.000729
ORF7a101F101delTTT---22C.36.30.001134
ORF7a101F101FttTttC22P.10.000032
ORF7a101F101del1Ttt-tt12P.10.000016
ORF7a101F101del1ttTtt-12P.10.000016
ORF7a101F101del2TTt--t22P.1.10.000635
ORF7a101F101FttTttC22R.10.00018
ORF7a101F101NTTtAAt110.055556
ORF7a101F101XtTTtAA110.055556
ORF7a101F101YtTttAt110.055556
ORF7a101F101KTTTAAA110.055556
ORF7a101F101ETTTGAA110.055556
ORF7a101F101DTTtGAt110.055556
ORF7a101F101delTTT---11A0.000387
ORF7a101F101delTTT---11A.10.000282
ORF7a101F101delTTT---11A.2.20.001689
ORF7a101F101delTTT---11A.210.00277
ORF7a101F101LttTttA11A.230.010526
ORF7a101F101ITttAtt11A.30.002096
ORF7a101F101delTTT---11A.60.005128
ORF7a101F101delTTT---11AH.30.003802
ORF7a101F101RTTTAGA11All0
ORF7a101F101KTTTAAA11All0
ORF7a101F101MTtTAtG11All0
ORF7a101F101DTTtGAt11All0
ORF7a101F101ETTTGAA11All0
ORF7a101F101delTTT---11AW.10.003049
ORF7a101F101delTTT---11AY.10.000396
ORF7a101F101delTTT---11AY.100.00053
ORF7a101F101CtTttGt11AY.1000.000046
ORF7a101F101del1Ttt-tt11AY.1000.000046
ORF7a101F101StTttCt11AY.1000.000046
ORF7a101F101del2TTT--N11AY.1020.000027
ORF7a101F101ITttAtt11AY.1020.000027
ORF7a101F101FttTttC11AY.1030.000006
ORF7a101F101delTTT---11AY.1060.000335
ORF7a101F101delTTT---11AY.1070.000466
ORF7a101F101delTTT---11AY.110.001339
ORF7a101F101StTttCt11AY.1100.000113
ORF7a101F101del1ttTtt-11AY.1110.000183
ORF7a101F101LTttCtt11AY.1180.000063
ORF7a101F101del1Ttt-tt11AY.1180.000063
ORF7a101F101del2TTt--t11AY.1180.000063
ORF7a101F101del1ttTtt-11AY.1190.000035
ORF7a101F101StTttCt11AY.1200.000037
ORF7a101F101VTttGtt11AY.130.000161
ORF7a101F101delTTT---11AY.130.000161
ORF7a101F101FttTttC11AY.140.000088
ORF7a101F101del1ttTtt-11AY.140.000088
ORF7a101F101ITttAtt11AY.190.00114
ORF7a101F101FttTttC11AY.230.00007
ORF7a101F101RTTTAGA11AY.250.000006
ORF7a101F101XtTTtGA11AY.250.000006
ORF7a101F101VTttGtt11AY.260.000028
ORF7a101F101del2TTt--t11AY.260.000028
ORF7a101F101del2tTTt--11AY.290.000016
ORF7a101F101ITttAtt11AY.30.00001
ORF7a101F101StTttCt11AY.30.00001
ORF7a101F101FttTttC11AY.30.00001
ORF7a101F101del1TTT-NN11AY.3.10.000085
ORF7a101F101FttTttC11AY.3.10.000085
ORF7a101F101LttTttG11AY.3.10.000085
ORF7a101F101FttTttC11AY.300.000396
ORF7a101F101StTttCt11AY.320.000532
ORF7a101F101delTTT---11AY.320.000532
ORF7a101F101delTTT---11AY.34.10.00051
ORF7a101F101del1ttTtt-11AY.370.000316
ORF7a101F101FttTttC11AY.390.000025
ORF7a101F101del1ttTtt-11AY.39.10.00004
ORF7a101F101ATTTGCC11AY.40.000002
ORF7a101F101LTttCtt11AY.4.20.000022
ORF7a101F101VTttGtt11AY.430.000004
ORF7a101F101FttTttC11AY.430.000004
ORF7a101F101ATTtGCt11AY.440.000006
ORF7a101F101StTttCt11AY.440.000006
ORF7a101F101del1Ttt-tt11AY.440.000006
ORF7a101F101CtTttGt11AY.440.000006
ORF7a101F101del2tTTt--11AY.450.000122
ORF7a101F101LttTttG11AY.470.000031
ORF7a101F101ITttAtt11AY.50.000021
ORF7a101F101delTTT---11AY.510.000909
ORF7a101F101delTTT---11AY.580.000907
ORF7a101F101delTTT---11AY.610.000105
ORF7a101F101delTTT---11AY.620.000436
ORF7a101F101FttTttC11AY.670.000464
ORF7a101F101delTTT---11AY.690.000187
ORF7a101F101del2TTt--t11AY.7.20.000559
ORF7a101F101delTTT---11AY.720.001361
ORF7a101F101delTTT---11AY.730.000665
ORF7a101F101HTTtCAt11AY.850.000427
ORF7a101F101delTTT---11AY.880.000884
ORF7a101F101VTttGtt11AY.90.000068
ORF7a101F101del1TTT-NN11AY.9.20.000037
ORF7a101F101LttTttA11AY.930.000273
ORF7a101F101FttTttC11AY.980.000079
ORF7a101F101FttTttC11AY.99.20.000092
ORF7a101F101delTTT---11AZ.20.000821
ORF7a101F101YtTttAt11B.10.000009
ORF7a101F101StTttCt11B.1.10.000018
ORF7a101F101FttTttC11B.1.10.000018
ORF7a101F101ITttAtt11B.1.10.000018
ORF7a101F101delTTT---11B.1.1.1210.002427
ORF7a101F101delTTT---11B.1.1.1320.014925
ORF7a101F101delTTT---11B.1.1.1530.001095
ORF7a101F101delTTT---11B.1.1.1680.026316
ORF7a101F101delTTT---11B.1.1.1890.001513
ORF7a101F101LTttCtt11B.1.1.2190.005
ORF7a101F101CtTttGt11B.1.1.2220.000204
ORF7a101F101delTTT---11B.1.1.2580.003257
ORF7a101F101delTTT---11B.1.1.2650.003155
ORF7a101F101delTTT---11B.1.1.2770.000759
ORF7a101F101delTTT---11B.1.1.2800.003086
ORF7a101F101del2TTt--t11B.1.1.2840.000107
ORF7a101F101delTTT---11B.1.1.2980.000862
ORF7a101F101FttTttC11B.1.1.3060.000438
ORF7a101F101delTTT---11B.1.1.3160.000925
ORF7a101F101delTTT---11B.1.1.3170.000412
ORF7a101F101delTTT---11B.1.1.3690.000446
ORF7a101F101delTTT---11B.1.1.3760.005952
ORF7a101F101LttTttG11B.1.1.3890.006061
ORF7a101F101LttTttG11B.1.1.3980.003226
ORF7a101F101delTTT---11B.1.1.3980.003226
ORF7a101F101LTttCtt11B.1.1.4110.014706
ORF7a101F101VTttGtt11B.1.1.4110.014706
ORF7a101F101delTTT---11B.1.1.4110.014706
ORF7a101F101delTTT---11B.1.1.4340.000349
ORF7a101F101LTttCtt11B.1.1.4340.000349
ORF7a101F101delTTT---11B.1.1.4480.002033
ORF7a101F101delTTT---11B.1.1.4860.001577
ORF7a101F101LTttCtt11B.1.1.5070.008696
ORF7a101F101LTttCtt11B.1.1.5150.02
ORF7a101F101FttTttC11B.1.1.5190.00004
ORF7a101F101delTTT---11B.1.1.700.000341
ORF7a101F101delTTT---11B.1.1150.021739
ORF7a101F101delTTT---11B.1.1260.001276
ORF7a101F101delTTT---11B.1.1570.002985
ORF7a101F101FttTttC11B.1.1600.000031
ORF7a101F101del2TTt--t11B.1.1600.000031
ORF7a101F101LttTttA11B.1.1600.000031
ORF7a101F101LTttCtt11B.1.160.110.005714
ORF7a101F101FttTttC11B.1.160.160.000929
ORF7a101F101del2TTt--t11B.1.160.70.002079
ORF7a101F101FttTttC11B.1.160.90.007194
ORF7a101F101FttTttC11B.1.1670.007812
ORF7a101F101StTttCt11B.1.1770.000013
ORF7a101F101ITttAtt11B.1.1770.000013
ORF7a101F101delTTT---11B.1.177.100.000878
ORF7a101F101ITttAtt11B.1.177.120.000152
ORF7a101F101delTTT---11B.1.177.160.000664
ORF7a101F101del2TTt--t11B.1.177.170.000821
ORF7a101F101LTttCtt11B.1.177.320.00135
ORF7a101F101delTTT---11B.1.177.40.000211
ORF7a101F101del1ttTtt-11B.1.177.430.001477
ORF7a101F101delTTT---11B.1.177.500.004695
ORF7a101F101delTTT---11B.1.177.540.000606
ORF7a101F101CtTTtGC11B.1.177.630.002703
ORF7a101F101del1ttTtt-11B.1.177.690.001484
ORF7a101F101LTttCtt11B.1.177.820.000477
ORF7a101F101del1ttTtt-11B.1.20.000009
ORF7a101F101StTttCt11B.1.20.000009
ORF7a101F101VTttGtt11B.1.20.000009
ORF7a101F101LTttCtt11B.1.2080.04
ORF7a101F101delTTT---11B.1.214.20.0006
ORF7a101F101LttTttA11B.1.2210.000071
ORF7a101F101delTTT---11B.1.2320.000537
ORF7a101F101LTttCtt11B.1.2430.00007
ORF7a101F101delTTT---11B.1.2470.014925
ORF7a101F101delTTT---11B.1.258.90.005
ORF7a101F101delTTT---11B.1.2650.001271
ORF7a101F101del1Ttt-tt11B.1.3190.003049
ORF7a101F101LTttCtt11B.1.3190.003049
ORF7a101F101delTTT---11B.1.3200.001245
ORF7a101F101del2TTt--t11B.1.3290.000608
ORF7a101F101delTTT---11B.1.351.30.000876
ORF7a101F101delTTT---11B.1.3560.001727
ORF7a101F101delTTT---11B.1.36.180.00042
ORF7a101F101delTTT---11B.1.36.200.016949
ORF7a101F101delTTT---11B.1.3620.001541
ORF7a101F101LTttCtt11B.1.3690.000285
ORF7a101F101delTTT---11B.1.3710.001122
ORF7a101F101delTTT---11B.1.3750.00082
ORF7a101F101LTttCtt11B.1.3890.001002
ORF7a101F101LttTttG11B.1.3980.002976
ORF7a101F101CtTttGt11B.1.3980.002976
ORF7a101F101delTTT---11B.1.4090.000781
ORF7a101F101StTttCt11B.1.4090.000781
ORF7a101F101delTTT---11B.1.4160.001269
ORF7a101F101StTttCt11B.1.4160.001269
ORF7a101F101delTTT---11B.1.4220.000812
ORF7a101F101CtTttGt11B.1.4270.00005
ORF7a101F101del1ttTtt-11B.1.4290.000024
ORF7a101F101ITttAtt11B.1.4290.000024
ORF7a101F101CtTttGt11B.1.4390.005917
ORF7a101F101delTTT---11B.1.4590.004082
ORF7a101F101CtTttGt11B.1.466.20.000391
ORF7a101F101delTTT---11B.1.466.20.000391
ORF7a101F101delTTT---11B.1.4680.005714
ORF7a101F101delTTT---11B.1.4700.001404
ORF7a101F101LTttCtt11B.1.4700.001404
ORF7a101F101LttTttA11B.1.4970.000315
ORF7a101F101StTttCt11B.1.4970.000315
ORF7a101F101delTTT---11B.1.4990.00105
ORF7a101F101delTTT---11B.1.5030.002488
ORF7a101F101delTTT---11B.1.5170.000427
ORF7a101F101NTTtAAt11B.1.5250.000113
ORF7a101F101YtTttAt11B.1.5260.000024
ORF7a101F101LTttCtt11B.1.5260.000024
ORF7a101F101del2TTT--N11B.1.5260.000024
ORF7a101F101delTTT---11B.1.5270.003704
ORF7a101F101del2TTt--t11B.1.5490.007194
ORF7a101F101ITttAtt11B.1.564.10.001577
ORF7a101F101delTTT---11B.1.5670.003333
ORF7a101F101delTTT---11B.1.5820.000491
ORF7a101F101delTTT---11B.1.5850.027778
ORF7a101F101delTTT---11B.1.5880.00091
ORF7a101F101StTttCt11B.1.5960.000087
ORF7a101F101ITttAtt11B.1.6090.000479
ORF7a101F101delTTT---11B.1.6090.000479
ORF7a101F101ITttAtt11B.1.617.20.000004
ORF7a101F101FttTttC11B.1.617.20.000004
ORF7a101F101del2tTTt--11B.1.617.20.000004
ORF7a101F101StTttCt11B.1.617.20.000004
ORF7a101F101ITttAtt11B.1.619.10.000641
ORF7a101F101delTTT---11B.1.6250.002353
ORF7a101F101ITttAtt11B.1.6370.000073
ORF7a101F101delTTT---11B.1.6380.052632
ORF7a101F101delTTT---11B.1.9.10.032258
ORF7a101F101delTTT---11B.120.00641
ORF7a101F101FttTttC11B.400.000364
ORF7a101F101LTttCtt11B.60.00091
ORF7a101F101LTttCtt11C.350.000774
ORF7a101F101StTttCt11C.350.000774
ORF7a101F101StTttCt11C.36.30.000567
ORF7a101F101YtTttAt11C.370.000116
ORF7a101F101StTttCt11D.20.000075
ORF7a101F101LTttCtt11D.20.000075
ORF7a101F101delTTT---11N.50.001767
ORF7a101F101LTttCtt11P.10.000016
ORF7a101F101FttTttC11P.1.140.000048
ORF7a101F101delTTT---11P.1.160.000374
ORF7a101F101MTtTAtG11P.1.160.000374
ORF7a101F101delTTT---11P.1.170.000162
ORF7a101F101LTttCtt11P.1.40.000977
ORF7a101F101delTTT---11P.1.40.000977
ORF7a101F101StTttCt11P.30.001595
ORF7a101F101del2TTt--t11Q.10.000126
ORF7a101F101delTTT---11Q.20.000613
ORF7a101F101FttTttC11Q.60.006623
ORF7a101F101LttTttA11Q.80.000165
ORF7a101F101del2tTTt--11Q.80.000165
ORF7a101F101CtTttGt11R.10.00009
ORF7a101F101ITttAtt11R.10.00009
ORF7a101F101delTTT---11U.30.003861
ORF7a101F101del1ttTtt-11W.40.001351