CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF6 : Mut = Y31del1

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF631Y31del1deltAct-c42200.4761927292-27294
ORF631Y31del1deltaCta-42180.42857127292-27294
ORF631Y31del1delTac-ac4220.04761927292-27294
ORF631Y31del1deltACt-T4220.04761927292-27294

Details of the mutation Y31del1 within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF631Y31del1tAct-c2042All0.000004
ORF631Y31del1taCta-1842All0.000003
ORF631Y31del1tACt-T242All0
ORF631Y31del1Tac-ac242All0
ORF631Y31del1taCta-1112B.1.617.20.000041
ORF631Y31del1tAct-c112B.1.617.20.000004
ORF631Y31del1tAct-c55AY.260.000142
ORF631Y31del1taCta-55AY.840.002187
ORF631Y31del1taCta-24B.1.177.210.000153
ORF631Y31del1tAct-c14B.1.177.210.000076
ORF631Y31del1tACt-T14B.1.177.210.000076
ORF631Y31del1tAct-c33AY.250.000018
ORF631Y31del1tAct-c23B.10.000018
ORF631Y31del1Tac-ac13B.10.000009
ORF631Y31del1tAct-c23B.1.1.70.000002
ORF631Y31del1tACt-T13B.1.1.70.000001
ORF631Y31del1tAct-c22AY.440.000012
ORF631Y31del1tAct-c11AV.10.005051
ORF631Y31del1tAct-c11AY.230.00007
ORF631Y31del1tAct-c11AY.430.000004
ORF631Y31del1Tac-ac11AY.50.000021
ORF631Y31del1tAct-c11B.1.1600.000031