CoV-GLUE Mutation

CoV-GLUE Mutation: ORF = ORF6 : Mut = Y31Y

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORF	CodonNum	Mut	ORF1abMut	MutType	RefCodon	MutCodon	AACount	CodonCount	CodonProp	Genome Position
ORF6	31	Y31Y		syn	taC	taT	13163	13163	1	27292-27294

Details of the mutation Y31Y within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORF	CodonNum	Mut	RefCodon	MutCodon	CodonCount	AACount	Lineage	LineageCodonProp
ORF6	31	Y31Y	taC	taT	13163	13163	All	0.002518
ORF6	31	Y31Y	taC	taT	4147	4147	B.1.1.7	0.003712
ORF6	31	Y31Y	taC	taT	1843	1843	B.1.617.2	0.00694
ORF6	31	Y31Y	taC	taT	1356	1356	AY.4	0.002111
ORF6	31	Y31Y	taC	taT	1049	1049	AY.43	0.004648
ORF6	31	Y31Y	taC	taT	363	363	A.28	0.960317
ORF6	31	Y31Y	taC	taT	296	296	AY.25	0.00178
ORF6	31	Y31Y	taC	taT	256	256	AY.3	0.002546
ORF6	31	Y31Y	taC	taT	236	236	B.1.369	0.067313
ORF6	31	Y31Y	taC	taT	225	225	B.1.1.222	0.0459
ORF6	31	Y31Y	taC	taT	197	197	AY.44	0.001199
ORF6	31	Y31Y	taC	taT	196	196	AY.26	0.005549
ORF6	31	Y31Y	taC	taT	164	164	B.1.2	0.001444
ORF6	31	Y31Y	taC	taT	159	159	B.1.480	0.395522
ORF6	31	Y31Y	taC	taT	127	127	P.1	0.002001
ORF6	31	Y31Y	taC	taT	120	120	B.1	0.001099
ORF6	31	Y31Y	taC	taT	118	118	B.1.36	0.017216
ORF6	31	Y31Y	taC	taT	113	113	AY.5	0.002333
ORF6	31	Y31Y	taC	taT	105	105	B.1.526	0.002468
ORF6	31	Y31Y	taC	taT	104	104	B.1.1	0.001887
ORF6	31	Y31Y	taC	taT	93	93	AY.103	0.000577
ORF6	31	Y31Y	taC	taT	91	91	B.1.128	0.057814
ORF6	31	Y31Y	taC	taT	77	77	B.1.351	0.002289
ORF6	31	Y31Y	taC	taT	70	70	AY.39	0.00173
ORF6	31	Y31Y	taC	taT	52	52	AY.46	0.005412
ORF6	31	Y31Y	taC	taT	47	47	Q.8	0.007751
ORF6	31	Y31Y	taC	taT	41	41	B.1.93	0.038282
ORF6	31	Y31Y	taC	taT	38	38	AY.6	0.001563
ORF6	31	Y31Y	taC	taT	36	36	AY.102	0.000955
ORF6	31	Y31Y	taC	taT	36	36	B.1.177.21	0.002753
ORF6	31	Y31Y	taC	taT	35	35	B.1.177	0.000461
ORF6	31	Y31Y	taC	taT	34	34	AY.29	0.000536
ORF6	31	Y31Y	taC	taT	33	33	AY.20	0.001283
ORF6	31	Y31Y	taC	taT	33	33	AZ.1	0.028621
ORF6	31	Y31Y	taC	taT	33	33	C.36.3	0.018718
ORF6	31	Y31Y	taC	taT	32	32	AY.4.2	0.000694
ORF6	31	Y31Y	taC	taT	31	31	B.1.160	0.000967
ORF6	31	Y31Y	taC	taT	30	30	C.37	0.003482
ORF6	31	Y31Y	taC	taT	28	28	B.1.619	0.02439
ORF6	31	Y31Y	taC	taT	28	28	C.35	0.021672
ORF6	31	Y31Y	taC	taT	24	24	AY.47	0.000747
ORF6	31	Y31Y	taC	taT	24	24	G.1	1
ORF6	31	Y31Y	taC	taT	22	22	AY.46.6	0.001589
ORF6	31	Y31Y	taC	taT	22	22	AY.78	0.033898
ORF6	31	Y31Y	taC	taT	22	22	B.1.1.28	0.006847
ORF6	31	Y31Y	taC	taT	22	22	B.1.1.284	0.002363
ORF6	31	Y31Y	taC	taT	22	22	B.1.160.29	0.092827
ORF6	31	Y31Y	taC	taT	20	20	AY.100	0.00092
ORF6	31	Y31Y	taC	taT	19	19	B.1.621	0.001682
ORF6	31	Y31Y	taC	taT	18	18	AY.119	0.000636
ORF6	31	Y31Y	taC	taT	18	18	B.1.1.207	0.021277
ORF6	31	Y31Y	taC	taT	17	17	P.1.14	0.000813
ORF6	31	Y31Y	taC	taT	16	16	B.1.243	0.001113
ORF6	31	Y31Y	taC	taT	15	15	AY.7	0.00294
ORF6	31	Y31Y	taC	taT	15	15	AY.99	0.01574
ORF6	31	Y31Y	taC	taT	15	15	B.1.623	0.008047
ORF6	31	Y31Y	taC	taT	14	14	B.1.525	0.001584
ORF6	31	Y31Y	taC	taT	14	14	B.1.596	0.00122
ORF6	31	Y31Y	taC	taT	13	13	B.1.637	0.00095
ORF6	31	Y31Y	taC	taT	13	13	W.3	0.068421
ORF6	31	Y31Y	taC	taT	12	12	AY.57	0.007874
ORF6	31	Y31Y	taC	taT	12	12	B.1.1.317	0.00494
ORF6	31	Y31Y	taC	taT	12	12	B.1.177.72	0.040678
ORF6	31	Y31Y	taC	taT	12	12	B.1.258	0.000799
ORF6	31	Y31Y	taC	taT	11	11	AY.33	0.000735
ORF6	31	Y31Y	taC	taT	11	11	AY.46.5	0.002183
ORF6	31	Y31Y	taC	taT	11	11	B.1.429	0.000259
ORF6	31	Y31Y	taC	taT	11	11	N.5	0.019435
ORF6	31	Y31Y	taC	taT	10	10	A	0.00387
ORF6	31	Y31Y	taC	taT	10	10	AY.117	0.000845
ORF6	31	Y31Y	taC	taT	10	10	B.1.1.519	0.000397
ORF6	31	Y31Y	taC	taT	9	9	AY.23	0.000628
ORF6	31	Y31Y	taC	taT	9	9	AY.34.1	0.004589
ORF6	31	Y31Y	taC	taT	9	9	AY.75	0.000504
ORF6	31	Y31Y	taC	taT	9	9	B	0.00115
ORF6	31	Y31Y	taC	taT	9	9	B.1.1.464	0.013255
ORF6	31	Y31Y	taC	taT	9	9	B.1.177.51	0.041096
ORF6	31	Y31Y	taC	taT	9	9	B.1.258.17	0.000936
ORF6	31	Y31Y	taC	taT	9	9	Q.3	0.001305
ORF6	31	Y31Y	taC	taT	8	8	AY.5.3	0.002699
ORF6	31	Y31Y	taC	taT	8	8	B.1.427	0.000404
ORF6	31	Y31Y	taC	taT	8	8	B.1.582	0.003925
ORF6	31	Y31Y	taC	taT	7	7	AY.105	0.004502
ORF6	31	Y31Y	taC	taT	7	7	AY.111	0.001282
ORF6	31	Y31Y	taC	taT	7	7	AY.118	0.000439
ORF6	31	Y31Y	taC	taT	7	7	B.1.1.157	0.006393
ORF6	31	Y31Y	taC	taT	7	7	B.1.1.270	0.072165
ORF6	31	Y31Y	taC	taT	7	7	B.1.165	0.083333
ORF6	31	Y31Y	taC	taT	7	7	B.1.351.2	0.002118
ORF6	31	Y31Y	taC	taT	7	7	B.1.575.1	0.017073
ORF6	31	Y31Y	taC	taT	7	7	R.1	0.00063
ORF6	31	Y31Y	taC	taT	6	6	AY.5.4	0.00166
ORF6	31	Y31Y	taC	taT	6	6	AY.64	0.003571
ORF6	31	Y31Y	taC	taT	6	6	AY.70	0.001251
ORF6	31	Y31Y	taC	taT	6	6	AY.98	0.000474
ORF6	31	Y31Y	taC	taT	6	6	AY.99.2	0.000553
ORF6	31	Y31Y	taC	taT	6	6	B.1.1.416	0.00543
ORF6	31	Y31Y	taC	taT	6	6	B.1.258.23	0.142857
ORF6	31	Y31Y	taC	taT	6	6	B.1.36.29	0.003104
ORF6	31	Y31Y	taC	taT	6	6	B.1.466.2	0.002347
ORF6	31	Y31Y	taC	taT	6	6	B.1.629	0.08
ORF6	31	Y31Y	taC	taT	6	6	C.36	0.005464
ORF6	31	Y31Y	taC	taT	6	6	Q.7	0.006667
ORF6	31	Y31Y	taC	taT	5	5	AY.110	0.000563
ORF6	31	Y31Y	taC	taT	5	5	AY.35	0.001165
ORF6	31	Y31Y	taC	taT	5	5	AY.38	0.002496
ORF6	31	Y31Y	taC	taT	5	5	AY.42	0.000201
ORF6	31	Y31Y	taC	taT	5	5	AY.67	0.002321
ORF6	31	Y31Y	taC	taT	5	5	AY.84	0.002187
ORF6	31	Y31Y	taC	taT	5	5	AY.9	0.000338
ORF6	31	Y31Y	taC	taT	5	5	AY.92	0.001436
ORF6	31	Y31Y	taC	taT	5	5	B.1.1.1	0.001633
ORF6	31	Y31Y	taC	taT	5	5	B.1.1.277	0.003794
ORF6	31	Y31Y	taC	taT	5	5	B.1.1.372	0.003444
ORF6	31	Y31Y	taC	taT	5	5	B.1.177.86	0.000917
ORF6	31	Y31Y	taC	taT	5	5	B.1.438.1	0.000536
ORF6	31	Y31Y	taC	taT	5	5	B.1.609	0.002397
ORF6	31	Y31Y	taC	taT	5	5	B.1.628	0.001762
ORF6	31	Y31Y	taC	taT	4	4	AY.16	0.001519
ORF6	31	Y31Y	taC	taT	4	4	AY.29.1	0.000882
ORF6	31	Y31Y	taC	taT	4	4	AY.39.1	0.000158
ORF6	31	Y31Y	taC	taT	4	4	AY.45	0.000487
ORF6	31	Y31Y	taC	taT	4	4	AY.61	0.000419
ORF6	31	Y31Y	taC	taT	4	4	AY.63	0.001547
ORF6	31	Y31Y	taC	taT	4	4	AZ.5	0.014035
ORF6	31	Y31Y	taC	taT	4	4	B.1.1.164	0.020619
ORF6	31	Y31Y	taC	taT	4	4	B.1.1.174	0.013514
ORF6	31	Y31Y	taC	taT	4	4	B.1.1.326	0.007042
ORF6	31	Y31Y	taC	taT	4	4	B.1.1.70	0.001364
ORF6	31	Y31Y	taC	taT	4	4	B.1.221	0.000284
ORF6	31	Y31Y	taC	taT	4	4	B.1.234	0.000528
ORF6	31	Y31Y	taC	taT	4	4	B.1.388	0.363636
ORF6	31	Y31Y	taC	taT	4	4	B.1.389	0.004008
ORF6	31	Y31Y	taC	taT	4	4	B.1.517	0.001708
ORF6	31	Y31Y	taC	taT	4	4	B.1.617.1	0.000516
ORF6	31	Y31Y	taC	taT	3	3	AY.106	0.001005
ORF6	31	Y31Y	taC	taT	3	3	AY.27	0.000194
ORF6	31	Y31Y	taC	taT	3	3	AY.3.1	0.000256
ORF6	31	Y31Y	taC	taT	3	3	AY.36	0.000445
ORF6	31	Y31Y	taC	taT	3	3	AY.4.2.1	0.000447
ORF6	31	Y31Y	taC	taT	3	3	AY.9.1	0.000251
ORF6	31	Y31Y	taC	taT	3	3	AY.90	0.002053
ORF6	31	Y31Y	taC	taT	3	3	AY.98.1	0.000145
ORF6	31	Y31Y	taC	taT	3	3	B.1.1.33	0.001263
ORF6	31	Y31Y	taC	taT	3	3	B.1.157	0.008955
ORF6	31	Y31Y	taC	taT	3	3	B.1.346	0.003932
ORF6	31	Y31Y	taC	taT	3	3	B.1.36.37	0.008333
ORF6	31	Y31Y	taC	taT	3	3	B.1.590	0.013636
ORF6	31	Y31Y	taC	taT	3	3	D.2	0.000225
ORF6	31	Y31Y	taC	taT	3	3	P.1.16	0.001122
ORF6	31	Y31Y	taC	taT	3	3	Q.4	0.001364
ORF6	31	Y31Y	taC	taT	2	2	A.1	0.000564
ORF6	31	Y31Y	taC	taT	2	2	AY.116	0.000574
ORF6	31	Y31Y	taC	taT	2	2	AY.13	0.000322
ORF6	31	Y31Y	taC	taT	2	2	AY.19	0.002281
ORF6	31	Y31Y	taC	taT	2	2	AY.34	0.000194
ORF6	31	Y31Y	taC	taT	2	2	AY.4.3	0.001684
ORF6	31	Y31Y	taC	taT	2	2	AY.46.2	0.001271
ORF6	31	Y31Y	taC	taT	2	2	AY.48	0.00093
ORF6	31	Y31Y	taC	taT	2	2	AY.54	0.000191
ORF6	31	Y31Y	taC	taT	2	2	AY.59	0.001059
ORF6	31	Y31Y	taC	taT	2	2	AY.60	0.001876
ORF6	31	Y31Y	taC	taT	2	2	AY.75.1	0.000361
ORF6	31	Y31Y	taC	taT	2	2	AY.9.2	0.000073
ORF6	31	Y31Y	taC	taT	2	2	AY.93	0.000546
ORF6	31	Y31Y	taC	taT	2	2	AZ.2	0.001642
ORF6	31	Y31Y	taC	taT	2	2	B.1.1.159	0.009346
ORF6	31	Y31Y	taC	taT	2	2	B.1.1.176	0.000879
ORF6	31	Y31Y	taC	taT	2	2	B.1.1.305	0.007722
ORF6	31	Y31Y	taC	taT	2	2	B.1.1.369	0.000892
ORF6	31	Y31Y	taC	taT	2	2	B.1.1.370	0.025316
ORF6	31	Y31Y	taC	taT	2	2	B.1.1.375	0.02381
ORF6	31	Y31Y	taC	taT	2	2	B.1.1.448	0.004065
ORF6	31	Y31Y	taC	taT	2	2	B.1.1.50	0.001358
ORF6	31	Y31Y	taC	taT	2	2	B.1.1.500	0.04
ORF6	31	Y31Y	taC	taT	2	2	B.1.1.523	0.003125
ORF6	31	Y31Y	taC	taT	2	2	B.1.110.3	0.001437
ORF6	31	Y31Y	taC	taT	2	2	B.1.177.33	0.003289
ORF6	31	Y31Y	taC	taT	2	2	B.1.177.4	0.000422
ORF6	31	Y31Y	taC	taT	2	2	B.1.177.7	0.00033
ORF6	31	Y31Y	taC	taT	2	2	B.1.189	0.008584
ORF6	31	Y31Y	taC	taT	2	2	B.1.222	0.003384
ORF6	31	Y31Y	taC	taT	2	2	B.1.258.11	0.000793
ORF6	31	Y31Y	taC	taT	2	2	B.1.470	0.002809
ORF6	31	Y31Y	taC	taT	2	2	B.1.510	0.052632
ORF6	31	Y31Y	taC	taT	2	2	B.40	0.000729
ORF6	31	Y31Y	taC	taT	2	2	C.38	0.016129
ORF6	31	Y31Y	taC	taT	2	2	P.1.10	0.000539
ORF6	31	Y31Y	taC	taT	2	2	P.1.17	0.000324
ORF6	31	Y31Y	taC	taT	1	1		0.055556
ORF6	31	Y31Y	taC	taT	1	1	A.2.5.1	0.004808
ORF6	31	Y31Y	taC	taT	1	1	A.23.1	0.000704
ORF6	31	Y31Y	taC	taT	1	1	AD.2	0.000219
ORF6	31	Y31Y	taC	taT	1	1	AP.1	0.001502
ORF6	31	Y31Y	taC	taT	1	1	AY.1	0.000396
ORF6	31	Y31Y	taC	taT	1	1	AY.10	0.00053
ORF6	31	Y31Y	taC	taT	1	1	AY.107	0.000466
ORF6	31	Y31Y	taC	taT	1	1	AY.113	0.000142
ORF6	31	Y31Y	taC	taT	1	1	AY.116.1	0.000311
ORF6	31	Y31Y	taC	taT	1	1	AY.120	0.000037
ORF6	31	Y31Y	taC	taT	1	1	AY.121	0.000135
ORF6	31	Y31Y	taC	taT	1	1	AY.14	0.000088
ORF6	31	Y31Y	taC	taT	1	1	AY.2	0.000356
ORF6	31	Y31Y	taC	taT	1	1	AY.24	0.000431
ORF6	31	Y31Y	taC	taT	1	1	AY.28	0.00189
ORF6	31	Y31Y	taC	taT	1	1	AY.4.4	0.000409
ORF6	31	Y31Y	taC	taT	1	1	AY.40	0.000964
ORF6	31	Y31Y	taC	taT	1	1	AY.41	0.000294
ORF6	31	Y31Y	taC	taT	1	1	AY.53	0.000288
ORF6	31	Y31Y	taC	taT	1	1	AY.68	0.000274
ORF6	31	Y31Y	taC	taT	1	1	AY.7.1	0.000113
ORF6	31	Y31Y	taC	taT	1	1	AY.7.2	0.000559
ORF6	31	Y31Y	taC	taT	1	1	AY.71	0.000475
ORF6	31	Y31Y	taC	taT	1	1	AY.74	0.000116
ORF6	31	Y31Y	taC	taT	1	1	AY.76	0.004831
ORF6	31	Y31Y	taC	taT	1	1	AY.82	0.001357
ORF6	31	Y31Y	taC	taT	1	1	B.1.1.12	0.007463
ORF6	31	Y31Y	taC	taT	1	1	B.1.1.194	0.00495
ORF6	31	Y31Y	taC	taT	1	1	B.1.1.196	0.005714
ORF6	31	Y31Y	taC	taT	1	1	B.1.1.198	0.001468
ORF6	31	Y31Y	taC	taT	1	1	B.1.1.214	0.000055
ORF6	31	Y31Y	taC	taT	1	1	B.1.1.216	0.00089
ORF6	31	Y31Y	taC	taT	1	1	B.1.1.231	0.003096
ORF6	31	Y31Y	taC	taT	1	1	B.1.1.236	0.006897
ORF6	31	Y31Y	taC	taT	1	1	B.1.1.240	0.004695
ORF6	31	Y31Y	taC	taT	1	1	B.1.1.25	0.000569
ORF6	31	Y31Y	taC	taT	1	1	B.1.1.263	0.001558
ORF6	31	Y31Y	taC	taT	1	1	B.1.1.291	0.000742
ORF6	31	Y31Y	taC	taT	1	1	B.1.1.306	0.000438
ORF6	31	Y31Y	taC	taT	1	1	B.1.1.322	0.008772
ORF6	31	Y31Y	taC	taT	1	1	B.1.1.333	0.001076
ORF6	31	Y31Y	taC	taT	1	1	B.1.1.366	0.015873
ORF6	31	Y31Y	taC	taT	1	1	B.1.1.376	0.005952
ORF6	31	Y31Y	taC	taT	1	1	B.1.1.377	0.001381
ORF6	31	Y31Y	taC	taT	1	1	B.1.1.378	0.007299
ORF6	31	Y31Y	taC	taT	1	1	B.1.1.39	0.00051
ORF6	31	Y31Y	taC	taT	1	1	B.1.1.4	0.002976
ORF6	31	Y31Y	taC	taT	1	1	B.1.1.409	0.002833
ORF6	31	Y31Y	taC	taT	1	1	B.1.1.418	0.022727
ORF6	31	Y31Y	taC	taT	1	1	B.1.1.420	0.001006
ORF6	31	Y31Y	taC	taT	1	1	B.1.1.465	0.015625
ORF6	31	Y31Y	taC	taT	1	1	B.1.1.526	0.003546
ORF6	31	Y31Y	taC	taT	1	1	B.1.1.54	0.003021
ORF6	31	Y31Y	taC	taT	1	1	B.1.1.63	0.000386
ORF6	31	Y31Y	taC	taT	1	1	B.1.110	0.004525
ORF6	31	Y31Y	taC	taT	1	1	B.1.142	0.002899
ORF6	31	Y31Y	taC	taT	1	1	B.1.147	0.000756
ORF6	31	Y31Y	taC	taT	1	1	B.1.177.12	0.000152
ORF6	31	Y31Y	taC	taT	1	1	B.1.177.17	0.000821
ORF6	31	Y31Y	taC	taT	1	1	B.1.177.57	0.000281
ORF6	31	Y31Y	taC	taT	1	1	B.1.177.69	0.001484
ORF6	31	Y31Y	taC	taT	1	1	B.1.177.73	0.000566
ORF6	31	Y31Y	taC	taT	1	1	B.1.177.75	0.001041
ORF6	31	Y31Y	taC	taT	1	1	B.1.177.84	0.006667
ORF6	31	Y31Y	taC	taT	1	1	B.1.177.87	0.000728
ORF6	31	Y31Y	taC	taT	1	1	B.1.177.9	0.001332
ORF6	31	Y31Y	taC	taT	1	1	B.1.179	0.003759
ORF6	31	Y31Y	taC	taT	1	1	B.1.206	0.000816
ORF6	31	Y31Y	taC	taT	1	1	B.1.225	0.015385
ORF6	31	Y31Y	taC	taT	1	1	B.1.23	0.006061
ORF6	31	Y31Y	taC	taT	1	1	B.1.240	0.000216
ORF6	31	Y31Y	taC	taT	1	1	B.1.258.14	0.00098
ORF6	31	Y31Y	taC	taT	1	1	B.1.3	0.002618
ORF6	31	Y31Y	taC	taT	1	1	B.1.351.5	0.0006
ORF6	31	Y31Y	taC	taT	1	1	B.1.36.10	0.004785
ORF6	31	Y31Y	taC	taT	1	1	B.1.36.19	0.009259
ORF6	31	Y31Y	taC	taT	1	1	B.1.36.21	0.00216
ORF6	31	Y31Y	taC	taT	1	1	B.1.36.26	0.002857
ORF6	31	Y31Y	taC	taT	1	1	B.1.36.8	0.001
ORF6	31	Y31Y	taC	taT	1	1	B.1.362	0.001541
ORF6	31	Y31Y	taC	taT	1	1	B.1.366	0.004878
ORF6	31	Y31Y	taC	taT	1	1	B.1.375	0.00082
ORF6	31	Y31Y	taC	taT	1	1	B.1.391	0.001127
ORF6	31	Y31Y	taC	taT	1	1	B.1.400	0.000429
ORF6	31	Y31Y	taC	taT	1	1	B.1.409	0.000781
ORF6	31	Y31Y	taC	taT	1	1	B.1.441	0.009615
ORF6	31	Y31Y	taC	taT	1	1	B.1.459	0.004082
ORF6	31	Y31Y	taC	taT	1	1	B.1.462	0.007246
ORF6	31	Y31Y	taC	taT	1	1	B.1.468	0.005714
ORF6	31	Y31Y	taC	taT	1	1	B.1.564	0.000426
ORF6	31	Y31Y	taC	taT	1	1	B.1.568	0.001111
ORF6	31	Y31Y	taC	taT	1	1	B.1.619.1	0.000641
ORF6	31	Y31Y	taC	taT	1	1	B.1.636	0.006711
ORF6	31	Y31Y	taC	taT	1	1	B.1.88.1	0.004808
ORF6	31	Y31Y	taC	taT	1	1	B.1.91	0.002075
ORF6	31	Y31Y	taC	taT	1	1	B.53	0.011765
ORF6	31	Y31Y	taC	taT	1	1	B.6	0.00091
ORF6	31	Y31Y	taC	taT	1	1	C.37.1	0.002618
ORF6	31	Y31Y	taC	taT	1	1	C.39	0.018868
ORF6	31	Y31Y	taC	taT	1	1	L.3	0.003546
ORF6	31	Y31Y	taC	taT	1	1	P.1.12	0.000484
ORF6	31	Y31Y	taC	taT	1	1	P.1.13	0.000898
ORF6	31	Y31Y	taC	taT	1	1	P.1.2	0.001156
ORF6	31	Y31Y	taC	taT	1	1	P.3	0.001595
ORF6	31	Y31Y	taC	taT	1	1	Q.1	0.000126

CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk

CoV-GLUE uses sequence data from GISAID. GISAID data provided via this web application is subject to GISAID's Terms and Conditions.