CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF6 : Mut = L4P

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF64L4PnonsyncTccCc7867820.99491127211-27213
ORF64L4PnonsyncTCcCT78630.0038167927211-27213
ORF64L4PnonsyncTCcCA78610.0012722627211-27213

Details of the mutation L4P within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF64L4PcTccCc782786All0.00015
ORF64L4PcTCcCT3786All0.000001
ORF64L4PcTCcCA1786All0
ORF64L4PcTccCc521521B.10.004772
ORF64L4PcTccCc100102B.1.1.70.00009
ORF64L4PcTCcCT2102B.1.1.70.000002
ORF64L4PcTccCc3636B.1.1.5190.00143
ORF64L4PcTccCc3333B.1.20.000291
ORF64L4PcTccCc88AY.40.000012
ORF64L4PcTccCc77AY.390.000173
ORF64L4PcTccCc77B.1.10.000127
ORF64L4PcTccCc77B.1.177.280.051852
ORF64L4PcTccCc55A.270.008278
ORF64L4PcTccCc33AY.1030.000019
ORF64L4PcTccCc33AY.440.000018
ORF64L4PcTccCc33B.1.1.3970.006757
ORF64L4PcTccCc33B.1.4330.009585
ORF64L4PcTccCc33B.1.5960.000261
ORF64L4PcTCcCA12AY.990.001049
ORF64L4PcTCcCT12AY.990.001049
ORF64L4PcTccCc22B.1.1.4160.00181
ORF64L4PcTccCc22B.1.1390.001466
ORF64L4PcTccCc22B.1.177.570.000562
ORF64L4PcTccCc22B.1.3510.000059
ORF64L4PcTccCc22B.1.5820.000981
ORF64L4PcTccCc22P.10.000032
ORF64L4PcTccCc11AY.1160.000287
ORF64L4PcTccCc11AY.250.000006
ORF64L4PcTccCc11AY.340.000097
ORF64L4PcTccCc11AY.360.000148
ORF64L4PcTccCc11AY.430.000004
ORF64L4PcTccCc11AY.450.000122
ORF64L4PcTccCc11AY.46.50.000198
ORF64L4PcTccCc11AY.46.60.000072
ORF64L4PcTccCc11AY.5.20.002463
ORF64L4PcTccCc11AY.680.000274
ORF64L4PcTccCc11AY.98.10.000048
ORF64L4PcTccCc11AZ.20.000821
ORF64L4PcTccCc11B.1.1.1610.003534
ORF64L4PcTccCc11B.1.1.2070.001182
ORF64L4PcTccCc11B.1.177.420.000894
ORF64L4PcTccCc11B.1.1900.01
ORF64L4PcTccCc11B.1.1940.04
ORF64L4PcTccCc11B.1.3260.007576
ORF64L4PcTccCc11B.1.3400.004292
ORF64L4PcTccCc11B.1.3690.000285
ORF64L4PcTccCc11B.1.3910.001127
ORF64L4PcTccCc11B.1.466.20.000391
ORF64L4PcTccCc11B.1.5320.006211
ORF64L4PcTccCc11B.1.5460.003704
ORF64L4PcTccCc11B.1.5800.004065
ORF64L4PcTccCc11B.1.6060.006024
ORF64L4PcTccCc11B.1.617.20.000004
ORF64L4PcTccCc11B.1.6210.000089
ORF64L4PcTccCc11B.560.028571
ORF64L4PcTccCc11P.20.000187
ORF64L4PcTccCc11Q.10.000126