CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF6 : Mut = L4F

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF64L4FnonsynCtcTtc2302280.99130427211-27213
ORF64L4FnonsynCtCTtT23020.0086956527211-27213

Details of the mutation L4F within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF64L4FCtcTtc228230All0.000044
ORF64L4FCtCTtT2230All0
ORF64L4FCtcTtc6868N.30.395349
ORF64L4FCtcTtc4343C.370.004991
ORF64L4FCtcTtc1516B.1.1.70.000013
ORF64L4FCtCTtT116B.1.1.70.000001
ORF64L4FCtcTtc1010B.1.1770.000132
ORF64L4FCtcTtc1010B.1.20.000088
ORF64L4FCtcTtc88AY.1030.00005
ORF64L4FCtcTtc66AY.430.000027
ORF64L4FCtcTtc55AY.39.10.000198
ORF64L4FCtcTtc55AY.40.000008
ORF64L4FCtcTtc44AY.230.000279
ORF64L4FCtcTtc44B.1.1.280.001245
ORF64L4FCtcTtc44B.1.617.20.000015
ORF64L4FCtcTtc33AY.1200.000112
ORF64L4FCtcTtc33AY.250.000018
ORF64L4FCtcTtc33AY.440.000018
ORF64L4FCtcTtc33B.1.466.20.001174
ORF64L4FCtcTtc33B.1.5960.000261
ORF64L4FCtcTtc33P.10.000047
ORF64L4FCtcTtc22AY.30.00002
ORF64L4FCtcTtc22B.10.000018
ORF64L4FCtcTtc12B.1.177.210.000076
ORF64L4FCtCTtT12B.1.177.210.000076
ORF64L4FCtcTtc22B.1.360.000292
ORF64L4FCtcTtc22B.400.000729
ORF64L4FCtcTtc22C.37.10.005236
ORF64L4FCtcTtc22D.20.00015
ORF64L4FCtcTtc11AY.390.000025
ORF64L4FCtcTtc11AY.4.2.10.000149
ORF64L4FCtcTtc11B.1.1.1220.045455
ORF64L4FCtcTtc11B.1.1.2140.000055
ORF64L4FCtcTtc11B.1.1.2410.00207
ORF64L4FCtcTtc11B.1.1.3160.000925
ORF64L4FCtcTtc11B.1.177.870.000728
ORF64L4FCtcTtc11B.1.2400.000216
ORF64L4FCtcTtc11B.1.3620.001541
ORF64L4FCtcTtc11B.1.5710.009709
ORF64L4FCtcTtc11B.1.575.20.004808
ORF64L4FCtcTtc11B.1.5880.00091
ORF64L4FCtcTtc11B.1.617.10.000129
ORF64L4FCtcTtc11B.1.6210.000089
ORF64L4FCtcTtc11P.1.120.000484