CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF6 : Mut = L29del1

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF629L29del1delCtt-tt45400.88888927286-27288
ORF629L29del1delcTtc-t4520.044444427286-27288
ORF629L29del1delCtT-tA4520.044444427286-27288
ORF629L29del1delCTt-Ct4510.022222227286-27288

Details of the mutation L29del1 within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF629L29del1Ctt-tt4045All0.000008
ORF629L29del1CtT-tA245All0
ORF629L29del1cTtc-t245All0
ORF629L29del1CTt-Ct145All0
ORF629L29del1Ctt-tt1313B.1.1050.125
ORF629L29del1CtT-tA24B.1.177.210.000153
ORF629L29del1Ctt-tt14B.1.177.210.000076
ORF629L29del1CTt-Ct14B.1.177.210.000076
ORF629L29del1Ctt-tt33AY.1030.000019
ORF629L29del1Ctt-tt23AY.440.000012
ORF629L29del1cTtc-t13AY.440.000006
ORF629L29del1Ctt-tt33B.1.177.100.002634
ORF629L29del1Ctt-tt33B.1.4290.000071
ORF629L29del1cTtc-t12AY.40.000002
ORF629L29del1Ctt-tt12AY.40.000002
ORF629L29del1Ctt-tt22AY.740.000231
ORF629L29del1Ctt-tt22B.1.617.20.000008
ORF629L29del1Ctt-tt22P.10.000032
ORF629L29del1Ctt-tt11AY.430.000004
ORF629L29del1Ctt-tt11AY.50.000021
ORF629L29del1Ctt-tt11B.10.000009
ORF629L29del1Ctt-tt11B.1.10.000018
ORF629L29del1Ctt-tt11B.1.1.250.000569
ORF629L29del1Ctt-tt11B.1.1.330.000421
ORF629L29del1Ctt-tt11B.1.1.70.000001
ORF629L29del1Ctt-tt11B.1.20.000009