CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF6 : Mut = I33T

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF633I33TnonsynaTaaCa870986150.98920727298-27300
ORF633I33TnonsynaTAaCG8709860.0098748427298-27300
ORF633I33TnonsynaTAaCT870980.0009185927298-27300

Details of the mutation I33T within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF633I33TaTaaCa86158709All0.001648
ORF633I33TaTAaCG868709All0.000016
ORF633I33TaTAaCT88709All0.000002
ORF633I33TaTaaCa32093209B.1.617.10.413851
ORF633I33TaTaaCa23502357B.1.1.330.989057
ORF633I33TaTAaCT72357B.1.1.330.002946
ORF633I33TaTaaCa558558N.50.985866
ORF633I33TaTaaCa234234N.40.995745
ORF633I33TaTaaCa232233B.10.002125
ORF633I33TaTAaCG1233B.10.000009
ORF633I33TaTaaCa188188AY.1110.034432
ORF633I33TaTaaCa172172N.31
ORF633I33TaTaaCa170170B.1.10.003084
ORF633I33TaTaaCa167167N.90.994048
ORF633I33TaTaaCa166166AY.40.000258
ORF633I33TaTaaCa138138N.60.978723
ORF633I33TaTaaCa9395B.1.617.20.00035
ORF633I33TaTAaCG295B.1.617.20.000008
ORF633I33TaTaaCa8292B.1.1.70.000073
ORF633I33TaTAaCG1092B.1.1.70.000009
ORF633I33TaTaaCa5959N.11
ORF633I33TaTaaCa5252AY.1020.001379
ORF633I33TaTaaCa4448B.1.20.000387
ORF633I33TaTAaCG448B.1.20.000035
ORF633I33TaTaaCa4545AY.470.0014
ORF633I33TaTaaCa4040B.1.177.810.007573
ORF633I33TaTaaCa3434AY.930.009285
ORF633I33TaTaaCa3434N.101
ORF633I33TaTaaCa3434N.71
ORF633I33TaTaaCa3232N.81
ORF633I33TaTaaCa2829AY.440.00017
ORF633I33TaTAaCG129AY.440.000006
ORF633I33TaTaaCa2626N.21
ORF633I33TaTaaCa1725AY.1030.000106
ORF633I33TaTAaCG825AY.1030.00005
ORF633I33TaTaaCa2225AY.1190.000777
ORF633I33TaTAaCG325AY.1190.000106
ORF633I33TaTaaCa2323AY.270.001489
ORF633I33TaTaaCa2123AY.430.000093
ORF633I33TaTAaCG223AY.430.000009
ORF633I33TaTaaCa2323AY.540.002193
ORF633I33TaTaaCa1921AY.390.00047
ORF633I33TaTAaCG221AY.390.000049
ORF633I33TaTaaCa2020AY.4.40.008183
ORF633I33TaTaaCa2020B.1.1700.086207
ORF633I33TaTaaCa1515AY.750.00084
ORF633I33TaTAaCG1414AY.60.000576
ORF633I33TaTaaCa1414B.1.1.1280.099291
ORF633I33TaTaaCa910AY.250.000054
ORF633I33TaTAaCG110AY.250.000006
ORF633I33TaTaaCa710AY.30.00007
ORF633I33TaTAaCG310AY.30.00003
ORF633I33TaTaaCa1010B.1.2140.03663
ORF633I33TaTaaCa1010C.80.044643
ORF633I33TaTaaCa78B.1.1.280.002179
ORF633I33TaTAaCG18B.1.1.280.000311
ORF633I33TaTaaCa88B.1.1.3930.888889
ORF633I33TaTaaCa78B.1.1.5190.000278
ORF633I33TaTAaCG18B.1.1.5190.00004
ORF633I33TaTaaCa88B.1.2340.001056
ORF633I33TaTaaCa77AY.200.000272
ORF633I33TaTaaCa77AY.610.000733
ORF633I33TaTAaCG77B.1.6200.006623
ORF633I33TaTaaCa66AY.3.10.000512
ORF633I33TaTaaCa66B.1.1770.000079
ORF633I33TaTaaCa55AY.1200.000186
ORF633I33TaTaaCa55AY.460.00052
ORF633I33TaTaaCa55AY.50.000103
ORF633I33TaTAaCG45B.1.3510.000119
ORF633I33TaTaaCa15B.1.3510.00003
ORF633I33TaTaaCa44AE.80.001956
ORF633I33TaTaaCa44AY.1160.001147
ORF633I33TaTaaCa44AY.260.000113
ORF633I33TaTaaCa44AY.420.000161
ORF633I33TaTaaCa44AY.680.001095
ORF633I33TaTaaCa44B0.000511
ORF633I33TaTaaCa44B.1.4290.000094
ORF633I33TaTaaCa44B.1.4870.078431
ORF633I33TaTAaCG34P.10.000047
ORF633I33TaTaaCa14P.10.000016
ORF633I33TaTaaCa23AY.4.20.000043
ORF633I33TaTAaCT13AY.4.20.000022
ORF633I33TaTaaCa33AY.450.000365
ORF633I33TaTaaCa33AY.46.60.000217
ORF633I33TaTaaCa33AY.770.003382
ORF633I33TaTaaCa33B.1.2580.0002
ORF633I33TaTaaCa23B.1.5260.000047
ORF633I33TaTAaCG13B.1.5260.000024
ORF633I33TaTaaCa33P.1.60.005837
ORF633I33TaTaaCa23P.1.70.000639
ORF633I33TaTAaCG13P.1.70.000319
ORF633I33TaTaaCa22AY.1000.000092
ORF633I33TaTaaCa22AY.1010.000981
ORF633I33TaTAaCG22AY.1130.000285
ORF633I33TaTaaCa22AY.230.000139
ORF633I33TaTaaCa12AY.5.30.000337
ORF633I33TaTAaCG12AY.5.30.000337
ORF633I33TaTaaCa12AY.620.000436
ORF633I33TaTAaCG12AY.620.000436
ORF633I33TaTaaCa22AY.75.10.000361
ORF633I33TaTaaCa22B.1.1570.00597
ORF633I33TaTaaCa22B.1.2430.000139
ORF633I33TaTaaCa22B.1.3110.000549
ORF633I33TaTAaCG12B.1.466.20.000391
ORF633I33TaTaaCa12B.1.466.20.000391
ORF633I33TaTaaCa22B.1.5610.000794
ORF633I33TaTAaCG22B.1.5960.000174
ORF633I33TaTAaCG22C.160.002121
ORF633I33TaTaaCa22P.20.000373
ORF633I33TaTaaCa22R.10.00018
ORF633I33TaTaaCa11A0.000387
ORF633I33TaTaaCa11A.280.002646
ORF633I33TaTaaCa11AY.1080.001103
ORF633I33TaTAaCG11AY.1170.000085
ORF633I33TaTAaCG11AY.1210.000135
ORF633I33TaTaaCa11AY.160.00038
ORF633I33TaTaaCa11AY.210.001898
ORF633I33TaTaaCa11AY.290.000016
ORF633I33TaTaaCa11AY.330.000067
ORF633I33TaTaaCa11AY.380.000499
ORF633I33TaTaaCa11AY.46.50.000198
ORF633I33TaTaaCa11AY.490.003195
ORF633I33TaTaaCa11AY.550.000917
ORF633I33TaTaaCa11AY.650.000533
ORF633I33TaTaaCa11AY.670.000464
ORF633I33TaTAaCG11AY.7.10.000113
ORF633I33TaTAaCG11AY.880.000884
ORF633I33TaTaaCa11AY.90.000068
ORF633I33TaTaaCa11AY.9.20.000037
ORF633I33TaTaaCa11AY.980.000079
ORF633I33TaTaaCa11AY.98.10.000048
ORF633I33TaTaaCa11B.1.1.1180.010204
ORF633I33TaTaaCa11B.1.1.1610.003534
ORF633I33TaTaaCa11B.1.1.1920.002309
ORF633I33TaTaaCa11B.1.1.2200.001859
ORF633I33TaTaaCa11B.1.1.3050.003861
ORF633I33TaTaaCa11B.1.1.3270.1
ORF633I33TaTaaCa11B.1.1.3320.03125
ORF633I33TaTaaCa11B.1.1.3560.008547
ORF633I33TaTaaCa11B.1.1.4090.002833
ORF633I33TaTaaCa11B.1.1.4340.000349
ORF633I33TaTaaCa11B.1.1.560.017857
ORF633I33TaTaaCa11B.1.1.700.000341
ORF633I33TaTaaCa11B.1.1040.00369
ORF633I33TaTaaCa11B.1.1390.000733
ORF633I33TaTaaCa11B.1.177.120.000152
ORF633I33TaTaaCa11B.1.177.330.001645
ORF633I33TaTAaCG11B.1.177.70.000165
ORF633I33TaTaaCa11B.1.2010.005682
ORF633I33TaTaaCa11B.1.3490.000715
ORF633I33TaTAaCG11B.1.360.000146
ORF633I33TaTaaCa11B.1.36.100.004785
ORF633I33TaTaaCa11B.1.3610.001289
ORF633I33TaTaaCa11B.1.3990.001934
ORF633I33TaTaaCa11B.1.416.10.001563
ORF633I33TaTaaCa11B.1.4590.004082
ORF633I33TaTaaCa11B.1.4620.007246
ORF633I33TaTaaCa11B.1.4790.038462
ORF633I33TaTaaCa11B.1.5750.000303
ORF633I33TaTaaCa11B.1.5940.03125
ORF633I33TaTaaCa11B.1.6210.000089
ORF633I33TaTAaCG11B.1.6370.000073
ORF633I33TaTaaCa11B.1.910.002075
ORF633I33TaTaaCa11C.1.20.004255
ORF633I33TaTaaCa11C.110.010638
ORF633I33TaTAaCG11C.370.000116
ORF633I33TaTaaCa11Q.80.000165