CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF6 : Mut = F22del1

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF622F22del1delTtt-tt6403790.59218827265-27267
ORF622F22del1delttTtt-6402580.40312527265-27267
ORF622F22del1delTtT-tA64010.001562527265-27267
ORF622F22del1delTTT-NN64010.001562527265-27267
ORF622F22del1delTTT-CC64010.001562527265-27267

Details of the mutation F22del1 within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF622F22del1Ttt-tt379640All0.000072
ORF622F22del1ttTtt-258640All0.000049
ORF622F22del1TTT-NN1640All0
ORF622F22del1TtT-tA1640All0
ORF622F22del1TTT-CC1640All0
ORF622F22del1Ttt-tt297310AY.40.000462
ORF622F22del1ttTtt-13310AY.40.00002
ORF622F22del1ttTtt-6572B.1.1.70.000058
ORF622F22del1Ttt-tt772B.1.1.70.000006
ORF622F22del1ttTtt-6464AY.4.20.001388
ORF622F22del1ttTtt-3737B.1.6160.902439
ORF622F22del1Ttt-tt2535B.10.000229
ORF622F22del1ttTtt-1035B.10.000092
ORF622F22del1ttTtt-612AY.430.000027
ORF622F22del1Ttt-tt512AY.430.000022
ORF622F22del1TTT-NN112AY.430.000004
ORF622F22del1Ttt-tt811B.1.617.20.00003
ORF622F22del1ttTtt-211B.1.617.20.000008
ORF622F22del1TtT-tA111B.1.617.20.000004
ORF622F22del1Ttt-tt89B.1.20.00007
ORF622F22del1ttTtt-19B.1.20.000009
ORF622F22del1ttTtt-77AY.440.000043
ORF622F22del1ttTtt-36AY.250.000018
ORF622F22del1Ttt-tt36AY.250.000018
ORF622F22del1ttTtt-66AY.840.002625
ORF622F22del1Ttt-tt45AY.420.000161
ORF622F22del1ttTtt-15AY.420.00004
ORF622F22del1ttTtt-34AY.130.000483
ORF622F22del1Ttt-tt14AY.130.000161
ORF622F22del1ttTtt-44AY.470.000124
ORF622F22del1ttTtt-34P.10.000047
ORF622F22del1Ttt-tt14P.10.000016
ORF622F22del1Ttt-tt33AY.710.001425
ORF622F22del1ttTtt-33B.1.6370.000219
ORF622F22del1Ttt-tt33C.370.000348
ORF622F22del1ttTtt-22AY.1030.000012
ORF622F22del1Ttt-tt12AY.1190.000035
ORF622F22del1ttTtt-12AY.1190.000035
ORF622F22del1Ttt-tt22AY.30.00002
ORF622F22del1ttTtt-22AY.50.000041
ORF622F22del1Ttt-tt12AY.99.20.000092
ORF622F22del1ttTtt-12AY.99.20.000092
ORF622F22del1ttTtt-22B.1.10.000036
ORF622F22del1ttTtt-22B.1.2340.000264
ORF622F22del1ttTtt-12B.1.2430.00007
ORF622F22del1Ttt-tt12B.1.2430.00007
ORF622F22del1ttTtt-22B.1.4270.000101
ORF622F22del1Ttt-tt11A0.000387
ORF622F22del1Ttt-tt11AY.1070.000466
ORF622F22del1ttTtt-11AY.1160.000287
ORF622F22del1ttTtt-11AY.140.000088
ORF622F22del1Ttt-tt11AY.270.000065
ORF622F22del1ttTtt-11AY.290.000016
ORF622F22del1Ttt-tt11AY.330.000067
ORF622F22del1ttTtt-11AY.360.000148
ORF622F22del1ttTtt-11AY.390.000025
ORF622F22del1ttTtt-11AY.450.000122
ORF622F22del1ttTtt-11AY.46.50.000198
ORF622F22del1ttTtt-11AY.530.000288
ORF622F22del1ttTtt-11AY.60.000041
ORF622F22del1ttTtt-11AY.700.000209
ORF622F22del1Ttt-tt11AY.750.000056
ORF622F22del1ttTtt-11AY.980.000079
ORF622F22del1Ttt-tt11B0.000128
ORF622F22del1ttTtt-11B.1.1.2980.000862
ORF622F22del1ttTtt-11B.1.1600.000031
ORF622F22del1Ttt-tt11B.1.177.200.001517
ORF622F22del1TTT-CC11B.1.177.210.000076
ORF622F22del1Ttt-tt11B.1.3110.000275
ORF622F22del1ttTtt-11B.1.4290.000024
ORF622F22del1ttTtt-11B.1.5960.000087
ORF622F22del1ttTtt-11B.1.617.30.002985
ORF622F22del1ttTtt-11C.2.10.006667
ORF622F22del1Ttt-tt11P.1.140.000048