CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF6 : Mut = D30del2

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF630D30del2delGAt--t6576160.93759527289-27291
ORF630D30del2delgATg--657400.060882827289-27291
ORF630D30del2delGATA--65710.0015220727289-27291

Details of the mutation D30del2 within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF630D30del2GAt--t616657All0.000118
ORF630D30del2gATg--40657All0.000008
ORF630D30del2GATA--1657All0
ORF630D30del2GAt--t198206AY.40.000308
ORF630D30del2gATg--8206AY.40.000012
ORF630D30del2GAt--t4346B.1.1.70.000038
ORF630D30del2gATg--346B.1.1.70.000003
ORF630D30del2GAt--t3544B.1.617.20.000132
ORF630D30del2gATg--944B.1.617.20.000034
ORF630D30del2GAt--t4343AY.250.000259
ORF630D30del2GAt--t2324B.1.20.000203
ORF630D30del2gATg--124B.1.20.000009
ORF630D30del2GAt--t2323B.10.000211
ORF630D30del2GAt--t2222AY.30.000219
ORF630D30del2GAt--t2020AY.440.000122
ORF630D30del2GAt--t1515AY.260.000425
ORF630D30del2gATg--914AY.1030.000056
ORF630D30del2GAt--t514AY.1030.000031
ORF630D30del2GAt--t1313B.1.5260.000306
ORF630D30del2GAt--t1112AY.1130.001566
ORF630D30del2gATg--112AY.1130.000142
ORF630D30del2GAt--t1011AY.430.000044
ORF630D30del2gATg--111AY.430.000004
ORF630D30del2GAt--t1010AY.750.00056
ORF630D30del2GAt--t68AY.200.000233
ORF630D30del2gATg--28AY.200.000078
ORF630D30del2GAt--t88AY.470.000249
ORF630D30del2GAt--t77AY.540.000667
ORF630D30del2GAt--t77B.1.351.20.002118
ORF630D30del2GAt--t55AY.340.000485
ORF630D30del2GAt--t55AY.4.20.000108
ORF630D30del2GAt--t55AY.50.000103
ORF630D30del2GAt--t55AY.9.20.000184
ORF630D30del2GAt--t55B.1.1770.000066
ORF630D30del2GAt--t44AY.1000.000184
ORF630D30del2GAt--t44B.1.1.2140.000222
ORF630D30del2GAt--t33AY.100.00159
ORF630D30del2GAt--t33AY.1100.000338
ORF630D30del2GAt--t33AY.290.000047
ORF630D30del2GAt--t33AY.3.10.000256
ORF630D30del2GAt--t33AY.390.000074
ORF630D30del2gATg--23AY.39.10.000079
ORF630D30del2GAt--t13AY.39.10.00004
ORF630D30del2GAt--t33AY.420.000121
ORF630D30del2GAt--t33B.1.10.000054
ORF630D30del2GAt--t23B.1.4290.000047
ORF630D30del2gATg--13B.1.4290.000024
ORF630D30del2GAt--t23B.1.5960.000174
ORF630D30del2gATg--13B.1.5960.000087
ORF630D30del2GAt--t33P.10.000047
ORF630D30del2GAt--t22AY.10.000791
ORF630D30del2GAt--t22AY.1020.000053
ORF630D30del2GAt--t22AY.1200.000074
ORF630D30del2GAt--t22AY.140.000176
ORF630D30del2GAt--t22AY.4.50.000215
ORF630D30del2GAt--t22AY.680.000547
ORF630D30del2GAt--t22B.1.177.180.00232
ORF630D30del2GAt--t12B.1.177.210.000076
ORF630D30del2GATA--12B.1.177.210.000076
ORF630D30del2GAt--t12B.1.2580.000067
ORF630D30del2gATg--12B.1.2580.000067
ORF630D30del2GAt--t22B.1.3320.006993
ORF630D30del2GAt--t22B.1.3510.000059
ORF630D30del2GAt--t11A0.000387
ORF630D30del2GAt--t11AY.1060.000335
ORF630D30del2GAt--t11AY.1080.001103
ORF630D30del2GAt--t11AY.1190.000035
ORF630D30del2GAt--t11AY.120.20.001285
ORF630D30del2GAt--t11AY.300.000396
ORF630D30del2GAt--t11AY.330.000067
ORF630D30del2GAt--t11AY.360.000148
ORF630D30del2GAt--t11AY.4.2.10.000149
ORF630D30del2GAt--t11AY.450.000122
ORF630D30del2GAt--t11AY.46.50.000198
ORF630D30del2GAt--t11AY.46.60.000072
ORF630D30del2GAt--t11AY.590.00053
ORF630D30del2GAt--t11AY.620.000436
ORF630D30del2GAt--t11AY.75.10.00018
ORF630D30del2GAt--t11AY.880.000884
ORF630D30del2GAt--t11AY.90.000068
ORF630D30del2GAt--t11AY.980.000079
ORF630D30del2GAt--t11AY.99.20.000092
ORF630D30del2GAt--t11B.1.1.2220.000204
ORF630D30del2GAt--t11B.1.1.3060.000438
ORF630D30del2GAt--t11B.1.1.330.000421
ORF630D30del2GAt--t11B.1.1.5190.00004
ORF630D30del2GAt--t11B.1.1.830.00271
ORF630D30del2GAt--t11B.1.1600.000031
ORF630D30del2GAt--t11B.1.177.50.001242
ORF630D30del2GAt--t11B.1.177.580.001332
ORF630D30del2GAt--t11B.1.258.170.000104
ORF630D30del2GAt--t11B.1.36.290.000517
ORF630D30del2GAt--t11B.1.36.380.001642
ORF630D30del2GAt--t11B.1.429.10.012048
ORF630D30del2GAt--t11B.1.5950.000261
ORF630D30del2gATg--11B.1.6210.000089
ORF630D30del2GAt--t11P.1.140.000048
ORF630D30del2GAt--t11Q.10.000126
ORF630D30del2GAt--t11R.10.00009