CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
ORF6 | 26 | I26del | del | ATT | --- | 2837 | 2837 | 1 | 27277-27279 | |
ORF6 | 26 | I26V | nonsyn | Att | Gtt | 875 | 875 | 1 | 27277-27279 | |
ORF6 | 26 | I26I | syn | atT | atC | 235 | 227 | 0.965957 | 27277-27279 | |
ORF6 | 26 | I26I | syn | atT | atA | 235 | 8 | 0.0340426 | 27277-27279 | |
ORF6 | 26 | I26T | nonsyn | aTt | aCt | 204 | 202 | 0.990196 | 27277-27279 | |
ORF6 | 26 | I26T | nonsyn | aTT | aCC | 204 | 2 | 0.00980392 | 27277-27279 | |
ORF6 | 26 | I26F | nonsyn | Att | Ttt | 118 | 108 | 0.915254 | 27277-27279 | |
ORF6 | 26 | I26F | nonsyn | AtT | TtC | 118 | 10 | 0.0847458 | 27277-27279 | |
ORF6 | 26 | I26M | nonsyn | atT | atG | 109 | 109 | 1 | 27277-27279 | |
ORF6 | 26 | I26L | nonsyn | Att | Ctt | 109 | 104 | 0.954128 | 27277-27279 | |
ORF6 | 26 | I26L | nonsyn | AtT | CtC | 109 | 4 | 0.0366972 | 27277-27279 | |
ORF6 | 26 | I26L | nonsyn | AtT | CtG | 109 | 1 | 0.00917431 | 27277-27279 | |
ORF6 | 26 | I26del1 | del | Att | -tt | 34 | 16 | 0.470588 | 27277-27279 | |
ORF6 | 26 | I26del1 | del | aTt | a-t | 34 | 11 | 0.323529 | 27277-27279 | |
ORF6 | 26 | I26del1 | del | atT | at- | 34 | 6 | 0.176471 | 27277-27279 | |
ORF6 | 26 | I26del1 | del | ATt | -At | 34 | 1 | 0.0294118 | 27277-27279 | |
ORF6 | 26 | I26N | nonsyn | aTt | aAt | 16 | 11 | 0.6875 | 27277-27279 | |
ORF6 | 26 | I26N | nonsyn | aTT | aAC | 16 | 5 | 0.3125 | 27277-27279 | |
ORF6 | 26 | I26S | nonsyn | aTt | aGt | 15 | 12 | 0.8 | 27277-27279 | |
ORF6 | 26 | I26S | nonsyn | ATt | TCt | 15 | 3 | 0.2 | 27277-27279 | |
ORF6 | 26 | I26del2 | del | ATt | --t | 3 | 2 | 0.666667 | 27277-27279 | |
ORF6 | 26 | I26del2 | del | aTT | a-- | 3 | 1 | 0.333333 | 27277-27279 | |
ORF6 | 26 | I26P | nonsyn | ATT | CCA | 2 | 2 | 1 | 27277-27279 |
Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
ORF6 | 26 | I26del | ATT | --- | 2837 | 2837 | All | 0.000543 |
ORF6 | 26 | I26V | Att | Gtt | 875 | 875 | All | 0.000167 |
ORF6 | 26 | I26del | ATT | --- | 617 | 617 | AY.4 | 0.00096 |
ORF6 | 26 | I26del | ATT | --- | 363 | 363 | B.1.1.7 | 0.000325 |
ORF6 | 26 | I26V | Att | Gtt | 294 | 294 | B.1.1.7 | 0.000263 |
ORF6 | 26 | I26I | atT | atC | 227 | 235 | All | 0.000043 |
ORF6 | 26 | I26I | atT | atA | 8 | 235 | All | 0.000002 |
ORF6 | 26 | I26T | aTt | aCt | 202 | 204 | All | 0.000039 |
ORF6 | 26 | I26T | aTT | aCC | 2 | 204 | All | 0 |
ORF6 | 26 | I26V | Att | Gtt | 185 | 185 | AY.4 | 0.000288 |
ORF6 | 26 | I26F | Att | Ttt | 108 | 118 | All | 0.000021 |
ORF6 | 26 | I26F | AtT | TtC | 10 | 118 | All | 0.000002 |
ORF6 | 26 | I26I | atT | atC | 117 | 117 | AY.20 | 0.004547 |
ORF6 | 26 | I26del | ATT | --- | 112 | 112 | B.1.617.2 | 0.000422 |
ORF6 | 26 | I26M | atT | atG | 109 | 109 | All | 0.000021 |
ORF6 | 26 | I26L | Att | Ctt | 104 | 109 | All | 0.00002 |
ORF6 | 26 | I26L | AtT | CtC | 4 | 109 | All | 0.000001 |
ORF6 | 26 | I26L | AtT | CtG | 1 | 109 | All | 0 |
ORF6 | 26 | I26del | ATT | --- | 108 | 108 | AY.43 | 0.000478 |
ORF6 | 26 | I26del | ATT | --- | 102 | 102 | AY.44 | 0.000621 |
ORF6 | 26 | I26del | ATT | --- | 101 | 101 | AY.4.2 | 0.002191 |
ORF6 | 26 | I26M | atT | atG | 98 | 98 | B.1.1.453 | 0.830508 |
ORF6 | 26 | I26del | ATT | --- | 92 | 92 | AY.25 | 0.000553 |
ORF6 | 26 | I26V | Att | Gtt | 84 | 84 | B.1.617.2 | 0.000316 |
ORF6 | 26 | I26L | Att | Ctt | 62 | 66 | B.1.177.21 | 0.004741 |
ORF6 | 26 | I26L | AtT | CtC | 4 | 66 | B.1.177.21 | 0.000306 |
ORF6 | 26 | I26del | ATT | --- | 63 | 63 | AY.103 | 0.000391 |
ORF6 | 26 | I26del | ATT | --- | 63 | 63 | B.1 | 0.000577 |
ORF6 | 26 | I26F | Att | Ttt | 53 | 63 | B.1.177.21 | 0.004053 |
ORF6 | 26 | I26F | AtT | TtC | 10 | 63 | B.1.177.21 | 0.000765 |
ORF6 | 26 | I26del | ATT | --- | 61 | 61 | AY.3 | 0.000607 |
ORF6 | 26 | I26del | ATT | --- | 59 | 59 | AY.47 | 0.001835 |
ORF6 | 26 | I26T | aTt | aCt | 52 | 54 | B.1.1.7 | 0.000047 |
ORF6 | 26 | I26T | aTT | aCC | 2 | 54 | B.1.1.7 | 0.000002 |
ORF6 | 26 | I26del | ATT | --- | 52 | 52 | AY.120 | 0.001933 |
ORF6 | 26 | I26del | ATT | --- | 49 | 49 | B.1.2 | 0.000431 |
ORF6 | 26 | I26del | ATT | --- | 41 | 41 | B.1.616 | 1 |
ORF6 | 26 | I26del | ATT | --- | 38 | 38 | P.1 | 0.000599 |
ORF6 | 26 | I26del | ATT | --- | 37 | 37 | AY.39 | 0.000914 |
ORF6 | 26 | I26V | Att | Gtt | 36 | 36 | AY.3 | 0.000358 |
ORF6 | 26 | I26del1 | Att | -tt | 16 | 34 | All | 0.000003 |
ORF6 | 26 | I26del1 | aTt | a-t | 11 | 34 | All | 0.000002 |
ORF6 | 26 | I26del1 | atT | at- | 6 | 34 | All | 0.000001 |
ORF6 | 26 | I26del1 | ATt | -At | 1 | 34 | All | 0 |
ORF6 | 26 | I26V | Att | Gtt | 34 | 34 | AY.7.1 | 0.003832 |
ORF6 | 26 | I26T | aTt | aCt | 34 | 34 | P.1.14 | 0.001625 |
ORF6 | 26 | I26del | ATT | --- | 32 | 32 | N.8 | 1 |
ORF6 | 26 | I26del | ATT | --- | 31 | 31 | AY.5 | 0.00064 |
ORF6 | 26 | I26V | Att | Gtt | 28 | 28 | AY.103 | 0.000174 |
ORF6 | 26 | I26del | ATT | --- | 25 | 25 | B.1.526 | 0.000588 |
ORF6 | 26 | I26del | ATT | --- | 24 | 24 | AY.26 | 0.000679 |
ORF6 | 26 | I26del | ATT | --- | 23 | 23 | AY.111 | 0.004212 |
ORF6 | 26 | I26T | aTt | aCt | 21 | 21 | AY.4 | 0.000033 |
ORF6 | 26 | I26del | ATT | --- | 21 | 21 | AY.6 | 0.000864 |
ORF6 | 26 | I26del | ATT | --- | 21 | 21 | AY.84 | 0.009186 |
ORF6 | 26 | I26del | ATT | --- | 20 | 20 | B.1.108 | 0.116279 |
ORF6 | 26 | I26V | Att | Gtt | 20 | 20 | B.1.2 | 0.000176 |
ORF6 | 26 | I26F | Att | Ttt | 18 | 18 | B.1.1.7 | 0.000016 |
ORF6 | 26 | I26del | ATT | --- | 17 | 17 | AY.13 | 0.002737 |
ORF6 | 26 | I26del | ATT | --- | 17 | 17 | AY.75 | 0.000952 |
ORF6 | 26 | I26del | ATT | --- | 17 | 17 | B.1.177.21 | 0.0013 |
ORF6 | 26 | I26N | aTt | aAt | 11 | 16 | All | 0.000002 |
ORF6 | 26 | I26N | aTT | aAC | 5 | 16 | All | 0.000001 |
ORF6 | 26 | I26del | ATT | --- | 16 | 16 | AY.118 | 0.001002 |
ORF6 | 26 | I26V | Att | Gtt | 16 | 16 | B.1.36 | 0.002334 |
ORF6 | 26 | I26S | aTt | aGt | 12 | 15 | All | 0.000002 |
ORF6 | 26 | I26S | ATt | TCt | 3 | 15 | All | 0.000001 |
ORF6 | 26 | I26del | ATT | --- | 15 | 15 | AY.36 | 0.002223 |
ORF6 | 26 | I26del | ATT | --- | 15 | 15 | AY.42 | 0.000603 |
ORF6 | 26 | I26del | ATT | --- | 14 | 14 | AY.54 | 0.001335 |
ORF6 | 26 | I26del | ATT | --- | 13 | 13 | AY.119 | 0.000459 |
ORF6 | 26 | I26del | ATT | --- | 13 | 13 | AY.29 | 0.000205 |
ORF6 | 26 | I26V | Att | Gtt | 13 | 13 | AY.44 | 0.000079 |
ORF6 | 26 | I26T | aTt | aCt | 13 | 13 | AY.46.4 | 0.002139 |
ORF6 | 26 | I26del | ATT | --- | 13 | 13 | AY.85 | 0.005553 |
ORF6 | 26 | I26del | ATT | --- | 13 | 13 | AY.90 | 0.008898 |
ORF6 | 26 | I26del | ATT | --- | 13 | 13 | B.1.105 | 0.125 |
ORF6 | 26 | I26del | ATT | --- | 13 | 13 | B.1.429 | 0.000306 |
ORF6 | 26 | I26del | ATT | --- | 12 | 12 | AY.20 | 0.000466 |
ORF6 | 26 | I26del | ATT | --- | 12 | 12 | B.1.36.36 | 0.007225 |
ORF6 | 26 | I26I | atT | atC | 11 | 11 | AY.103 | 0.000068 |
ORF6 | 26 | I26del | ATT | --- | 11 | 11 | AY.113 | 0.001566 |
ORF6 | 26 | I26V | Att | Gtt | 11 | 11 | AY.20 | 0.000428 |
ORF6 | 26 | I26V | Att | Gtt | 11 | 11 | AY.39 | 0.000272 |
ORF6 | 26 | I26del | ATT | --- | 11 | 11 | AY.39.1 | 0.000436 |
ORF6 | 26 | I26L | Att | Ctt | 11 | 11 | AY.4 | 0.000017 |
ORF6 | 26 | I26V | Att | Gtt | 11 | 11 | AY.43 | 0.000049 |
ORF6 | 26 | I26del | ATT | --- | 11 | 11 | AY.46 | 0.001145 |
ORF6 | 26 | I26del | ATT | --- | 11 | 11 | AY.9.2 | 0.000404 |
ORF6 | 26 | I26I | atT | atC | 10 | 11 | B.1.1.7 | 0.000009 |
ORF6 | 26 | I26I | atT | atA | 1 | 11 | B.1.1.7 | 0.000001 |
ORF6 | 26 | I26I | atT | atC | 10 | 11 | B.1.617.2 | 0.000038 |
ORF6 | 26 | I26I | atT | atA | 1 | 11 | B.1.617.2 | 0.000004 |
ORF6 | 26 | I26F | Att | Ttt | 11 | 11 | P.1 | 0.000173 |
ORF6 | 26 | I26del | ATT | --- | 10 | 10 | AY.100 | 0.00046 |
ORF6 | 26 | I26del | ATT | --- | 10 | 10 | AY.14 | 0.00088 |
ORF6 | 26 | I26T | aTt | aCt | 10 | 10 | AY.25 | 0.00006 |
ORF6 | 26 | I26del | ATT | --- | 10 | 10 | AY.45 | 0.001217 |
ORF6 | 26 | I26I | atT | atC | 10 | 10 | B.1.160 | 0.000312 |
ORF6 | 26 | I26V | Att | Gtt | 10 | 10 | B.1.329 | 0.006075 |
ORF6 | 26 | I26del | ATT | --- | 9 | 9 | AY.106 | 0.003014 |
ORF6 | 26 | I26V | Att | Gtt | 9 | 9 | AY.26 | 0.000255 |
ORF6 | 26 | I26I | atT | atC | 6 | 9 | AY.4 | 0.000009 |
ORF6 | 26 | I26I | atT | atA | 3 | 9 | AY.4 | 0.000005 |
ORF6 | 26 | I26del | ATT | --- | 9 | 9 | AY.4.2.1 | 0.001341 |
ORF6 | 26 | I26T | aTt | aCt | 9 | 9 | AY.43 | 0.00004 |
ORF6 | 26 | I26V | Att | Gtt | 9 | 9 | B.1.1.39 | 0.004587 |
ORF6 | 26 | I26I | atT | atC | 8 | 9 | B.1.1.50 | 0.005431 |
ORF6 | 26 | I26I | atT | atA | 1 | 9 | B.1.1.50 | 0.000679 |
ORF6 | 26 | I26del1 | Att | -tt | 5 | 9 | B.1.1.7 | 0.000004 |
ORF6 | 26 | I26del1 | atT | at- | 2 | 9 | B.1.1.7 | 0.000002 |
ORF6 | 26 | I26del1 | aTt | a-t | 2 | 9 | B.1.1.7 | 0.000002 |
ORF6 | 26 | I26del | ATT | --- | 9 | 9 | B.1.177 | 0.000119 |
ORF6 | 26 | I26del | ATT | --- | 9 | 9 | B.1.240 | 0.00194 |
ORF6 | 26 | I26del | ATT | --- | 8 | 8 | AY.102 | 0.000212 |
ORF6 | 26 | I26del | ATT | --- | 8 | 8 | AY.46.5 | 0.001587 |
ORF6 | 26 | I26V | Att | Gtt | 8 | 8 | AY.6 | 0.000329 |
ORF6 | 26 | I26del | ATT | --- | 8 | 8 | B.1.351 | 0.000238 |
ORF6 | 26 | I26T | aTt | aCt | 8 | 8 | B.1.617.2 | 0.00003 |
ORF6 | 26 | I26V | Att | Gtt | 7 | 7 | AY.11 | 0.009371 |
ORF6 | 26 | I26del | ATT | --- | 7 | 7 | AY.61 | 0.000733 |
ORF6 | 26 | I26del | ATT | --- | 7 | 7 | B.1.1 | 0.000127 |
ORF6 | 26 | I26del | ATT | --- | 7 | 7 | B.1.234 | 0.000924 |
ORF6 | 26 | I26del | ATT | --- | 7 | 7 | B.1.351.2 | 0.002118 |
ORF6 | 26 | I26del | ATT | --- | 7 | 7 | B.1.36.26 | 0.02 |
ORF6 | 26 | I26del | ATT | --- | 7 | 7 | B.1.621 | 0.00062 |
ORF6 | 26 | I26del | ATT | --- | 6 | 6 | AY.27 | 0.000388 |
ORF6 | 26 | I26del | ATT | --- | 6 | 6 | AY.3.1 | 0.000512 |
ORF6 | 26 | I26del | ATT | --- | 6 | 6 | AY.98.1 | 0.000291 |
ORF6 | 26 | I26del | ATT | --- | 6 | 6 | B.1.1.214 | 0.000333 |
ORF6 | 26 | I26del | ATT | --- | 6 | 6 | B.1.1.222 | 0.001224 |
ORF6 | 26 | I26L | Att | Ctt | 6 | 6 | B.1.1.7 | 0.000005 |
ORF6 | 26 | I26T | aTt | aCt | 6 | 6 | B.1.2 | 0.000053 |
ORF6 | 26 | I26T | aTt | aCt | 6 | 6 | B.1.243 | 0.000418 |
ORF6 | 26 | I26del | ATT | --- | 6 | 6 | B.1.258 | 0.000399 |
ORF6 | 26 | I26del | ATT | --- | 6 | 6 | B.1.311 | 0.001647 |
ORF6 | 26 | I26V | Att | Gtt | 6 | 6 | D.2 | 0.00045 |
ORF6 | 26 | I26V | Att | Gtt | 5 | 5 | AY.13 | 0.000805 |
ORF6 | 26 | I26del | ATT | --- | 5 | 5 | AY.33 | 0.000334 |
ORF6 | 26 | I26del | ATT | --- | 5 | 5 | AY.34 | 0.000485 |
ORF6 | 26 | I26del | ATT | --- | 5 | 5 | AY.98 | 0.000395 |
ORF6 | 26 | I26del | ATT | --- | 5 | 5 | B.1.1.318 | 0.001509 |
ORF6 | 26 | I26del | ATT | --- | 5 | 5 | B.1.427 | 0.000252 |
ORF6 | 26 | I26del | ATT | --- | 5 | 5 | P.1.10 | 0.001347 |
ORF6 | 26 | I26del | ATT | --- | 5 | 5 | R.1 | 0.00045 |
ORF6 | 26 | I26N | aTt | aAt | 2 | 4 | 0.111111 | |
ORF6 | 26 | I26N | aTT | aAC | 2 | 4 | 0.111111 | |
ORF6 | 26 | I26del | ATT | --- | 4 | 4 | A | 0.001548 |
ORF6 | 26 | I26del | ATT | --- | 4 | 4 | AU.2 | 0.009685 |
ORF6 | 26 | I26del | ATT | --- | 4 | 4 | AY.110 | 0.000451 |
ORF6 | 26 | I26T | aTt | aCt | 4 | 4 | AY.29 | 0.000063 |
ORF6 | 26 | I26I | atT | atC | 4 | 4 | AY.46.6 | 0.000289 |
ORF6 | 26 | I26del | ATT | --- | 4 | 4 | AY.68 | 0.001095 |
ORF6 | 26 | I26V | Att | Gtt | 4 | 4 | AY.9 | 0.00027 |
ORF6 | 26 | I26del | ATT | --- | 4 | 4 | AY.9.1 | 0.000335 |
ORF6 | 26 | I26V | Att | Gtt | 4 | 4 | B.1 | 0.000037 |
ORF6 | 26 | I26I | atT | atC | 4 | 4 | B.1.1 | 0.000073 |
ORF6 | 26 | I26V | Att | Gtt | 4 | 4 | B.1.1 | 0.000073 |
ORF6 | 26 | I26del | ATT | --- | 4 | 4 | B.1.1.519 | 0.000159 |
ORF6 | 26 | I26I | atT | atC | 4 | 4 | B.1.396 | 0.002823 |
ORF6 | 26 | I26del | ATT | --- | 4 | 4 | B.1.525 | 0.000453 |
ORF6 | 26 | I26V | Att | Gtt | 4 | 4 | P.1 | 0.000063 |
ORF6 | 26 | I26del | ATT | --- | 4 | 4 | P.1.17 | 0.000647 |
ORF6 | 26 | I26del2 | ATt | --t | 2 | 3 | All | 0 |
ORF6 | 26 | I26del2 | aTT | a-- | 1 | 3 | All | 0 |
ORF6 | 26 | I26T | aTt | aCt | 3 | 3 | AY.103 | 0.000019 |
ORF6 | 26 | I26L | Att | Ctt | 3 | 3 | AY.116 | 0.00086 |
ORF6 | 26 | I26del | ATT | --- | 3 | 3 | AY.12 | 0.000948 |
ORF6 | 26 | I26del | ATT | --- | 3 | 3 | AY.2 | 0.001068 |
ORF6 | 26 | I26V | Att | Gtt | 3 | 3 | AY.23 | 0.000209 |
ORF6 | 26 | I26L | Att | Ctt | 3 | 3 | AY.3 | 0.00003 |
ORF6 | 26 | I26T | aTt | aCt | 3 | 3 | AY.33 | 0.0002 |
ORF6 | 26 | I26S | aTt | aGt | 3 | 3 | AY.4 | 0.000005 |
ORF6 | 26 | I26del | ATT | --- | 3 | 3 | AY.4.5 | 0.000322 |
ORF6 | 26 | I26I | atT | atC | 3 | 3 | AY.44 | 0.000018 |
ORF6 | 26 | I26del | ATT | --- | 3 | 3 | AY.46.6 | 0.000217 |
ORF6 | 26 | I26S | aTt | aGt | 3 | 3 | AY.61 | 0.000314 |
ORF6 | 26 | I26del | ATT | --- | 3 | 3 | AY.71 | 0.001425 |
ORF6 | 26 | I26del | ATT | --- | 3 | 3 | AY.9 | 0.000203 |
ORF6 | 26 | I26F | Att | Ttt | 3 | 3 | B.1.1 | 0.000054 |
ORF6 | 26 | I26del | ATT | --- | 3 | 3 | B.1.1.33 | 0.001263 |
ORF6 | 26 | I26T | aTt | aCt | 3 | 3 | B.1.1.519 | 0.000119 |
ORF6 | 26 | I26V | Att | Gtt | 3 | 3 | B.1.177 | 0.00004 |
ORF6 | 26 | I26del | ATT | --- | 3 | 3 | B.1.177.10 | 0.002634 |
ORF6 | 26 | I26V | Att | Gtt | 3 | 3 | B.1.177.21 | 0.000229 |
ORF6 | 26 | I26S | ATt | TCt | 3 | 3 | B.1.177.21 | 0.000229 |
ORF6 | 26 | I26I | atT | atC | 3 | 3 | B.1.2 | 0.000026 |
ORF6 | 26 | I26del | ATT | --- | 3 | 3 | B.1.214.2 | 0.001799 |
ORF6 | 26 | I26V | Att | Gtt | 3 | 3 | B.1.36.8 | 0.003 |
ORF6 | 26 | I26del | ATT | --- | 3 | 3 | B.1.617.1 | 0.000387 |
ORF6 | 26 | I26del | ATT | --- | 3 | 3 | B.1.637 | 0.000219 |
ORF6 | 26 | I26I | atT | atC | 3 | 3 | C.37 | 0.000348 |
ORF6 | 26 | I26del | ATT | --- | 3 | 3 | C.37 | 0.000348 |
ORF6 | 26 | I26V | Att | Gtt | 3 | 3 | P.1.1 | 0.000953 |
ORF6 | 26 | I26V | Att | Gtt | 3 | 3 | P.2 | 0.00056 |
ORF6 | 26 | I26del | ATT | --- | 3 | 3 | P.3 | 0.004785 |
ORF6 | 26 | I26F | Att | Ttt | 2 | 2 | 0.111111 | |
ORF6 | 26 | I26P | ATT | CCA | 2 | 2 | 0.111111 | |
ORF6 | 26 | I26P | ATT | CCA | 2 | 2 | All | 0 |
ORF6 | 26 | I26V | Att | Gtt | 2 | 2 | AY.102 | 0.000053 |
ORF6 | 26 | I26I | atT | atC | 2 | 2 | AY.102 | 0.000053 |
ORF6 | 26 | I26T | aTt | aCt | 2 | 2 | AY.102 | 0.000053 |
ORF6 | 26 | I26S | aTt | aGt | 2 | 2 | AY.103 | 0.000012 |
ORF6 | 26 | I26del1 | Att | -tt | 1 | 2 | AY.103 | 0.000006 |
ORF6 | 26 | I26del1 | ATt | -At | 1 | 2 | AY.103 | 0.000006 |
ORF6 | 26 | I26V | Att | Gtt | 2 | 2 | AY.119 | 0.000071 |
ORF6 | 26 | I26del | ATT | --- | 2 | 2 | AY.120.2 | 0.002571 |
ORF6 | 26 | I26I | atT | atC | 2 | 2 | AY.14 | 0.000176 |
ORF6 | 26 | I26del | ATT | --- | 2 | 2 | AY.23 | 0.000139 |
ORF6 | 26 | I26I | atT | atC | 2 | 2 | AY.24 | 0.000862 |
ORF6 | 26 | I26L | Att | Ctt | 2 | 2 | AY.25 | 0.000012 |
ORF6 | 26 | I26V | Att | Gtt | 2 | 2 | AY.25 | 0.000012 |
ORF6 | 26 | I26del | ATT | --- | 2 | 2 | AY.28 | 0.003781 |
ORF6 | 26 | I26T | aTt | aCt | 2 | 2 | AY.3 | 0.00002 |
ORF6 | 26 | I26T | aTt | aCt | 2 | 2 | AY.35 | 0.000466 |
ORF6 | 26 | I26N | aTt | aAt | 2 | 2 | AY.4 | 0.000003 |
ORF6 | 26 | I26T | aTt | aCt | 2 | 2 | AY.4.2 | 0.000043 |
ORF6 | 26 | I26del | ATT | --- | 2 | 2 | AY.40 | 0.001929 |
ORF6 | 26 | I26I | atT | atC | 2 | 2 | AY.43 | 0.000009 |
ORF6 | 26 | I26F | Att | Ttt | 2 | 2 | AY.43 | 0.000009 |
ORF6 | 26 | I26T | aTt | aCt | 2 | 2 | AY.44 | 0.000012 |
ORF6 | 26 | I26del1 | Att | -tt | 1 | 2 | AY.44 | 0.000006 |
ORF6 | 26 | I26del1 | atT | at- | 1 | 2 | AY.44 | 0.000006 |
ORF6 | 26 | I26del | ATT | --- | 2 | 2 | AY.46.2 | 0.001271 |
ORF6 | 26 | I26F | Att | Ttt | 2 | 2 | AY.47 | 0.000062 |
ORF6 | 26 | I26T | aTt | aCt | 2 | 2 | AY.5 | 0.000041 |
ORF6 | 26 | I26V | Att | Gtt | 2 | 2 | AY.5 | 0.000041 |
ORF6 | 26 | I26del | ATT | --- | 2 | 2 | AY.52 | 0.001629 |
ORF6 | 26 | I26del | ATT | --- | 2 | 2 | AY.53 | 0.000575 |
ORF6 | 26 | I26del | ATT | --- | 2 | 2 | AY.70 | 0.000417 |
ORF6 | 26 | I26del | ATT | --- | 2 | 2 | AY.74 | 0.000231 |
ORF6 | 26 | I26del | ATT | --- | 2 | 2 | AY.75.1 | 0.000361 |
ORF6 | 26 | I26I | atT | atC | 2 | 2 | AY.99.2 | 0.000184 |
ORF6 | 26 | I26V | Att | Gtt | 2 | 2 | AY.99.2 | 0.000184 |
ORF6 | 26 | I26del | ATT | --- | 2 | 2 | AY.99.2 | 0.000184 |
ORF6 | 26 | I26del | ATT | --- | 2 | 2 | B | 0.000256 |
ORF6 | 26 | I26F | Att | Ttt | 2 | 2 | B.1 | 0.000018 |
ORF6 | 26 | I26L | Att | Ctt | 2 | 2 | B.1 | 0.000018 |
ORF6 | 26 | I26del1 | aTt | a-t | 1 | 2 | B.1 | 0.000009 |
ORF6 | 26 | I26del1 | atT | at- | 1 | 2 | B.1 | 0.000009 |
ORF6 | 26 | I26del | ATT | --- | 2 | 2 | B.1.1.1 | 0.000653 |
ORF6 | 26 | I26V | Att | Gtt | 2 | 2 | B.1.1.216 | 0.001781 |
ORF6 | 26 | I26del | ATT | --- | 2 | 2 | B.1.1.231 | 0.006192 |
ORF6 | 26 | I26V | Att | Gtt | 2 | 2 | B.1.1.434 | 0.000697 |
ORF6 | 26 | I26del | ATT | --- | 2 | 2 | B.1.1.461 | 0.024096 |
ORF6 | 26 | I26M | atT | atG | 2 | 2 | B.1.1.7 | 0.000002 |
ORF6 | 26 | I26del1 | Att | -tt | 2 | 2 | B.1.177.21 | 0.000153 |
ORF6 | 26 | I26T | aTt | aCt | 2 | 2 | B.1.177.60 | 0.000437 |
ORF6 | 26 | I26del | ATT | --- | 2 | 2 | B.1.177.7 | 0.00033 |
ORF6 | 26 | I26del | ATT | --- | 2 | 2 | B.1.195 | 0.01005 |
ORF6 | 26 | I26V | Att | Gtt | 2 | 2 | B.1.221 | 0.000142 |
ORF6 | 26 | I26del | ATT | --- | 2 | 2 | B.1.221 | 0.000142 |
ORF6 | 26 | I26del | ATT | --- | 2 | 2 | B.1.229 | 0.019417 |
ORF6 | 26 | I26del | ATT | --- | 2 | 2 | B.1.243 | 0.000139 |
ORF6 | 26 | I26I | atT | atC | 2 | 2 | B.1.258 | 0.000133 |
ORF6 | 26 | I26I | atT | atC | 2 | 2 | B.1.258.17 | 0.000208 |
ORF6 | 26 | I26del | ATT | --- | 2 | 2 | B.1.332 | 0.006993 |
ORF6 | 26 | I26del | ATT | --- | 2 | 2 | B.1.36.17 | 0.000988 |
ORF6 | 26 | I26I | atT | atC | 2 | 2 | B.1.36.29 | 0.001035 |
ORF6 | 26 | I26del | ATT | --- | 2 | 2 | B.1.400 | 0.000858 |
ORF6 | 26 | I26L | Att | Ctt | 2 | 2 | B.1.428.2 | 0.066667 |
ORF6 | 26 | I26F | Att | Ttt | 2 | 2 | B.1.429 | 0.000047 |
ORF6 | 26 | I26V | Att | Gtt | 2 | 2 | B.1.429 | 0.000047 |
ORF6 | 26 | I26del | ATT | --- | 2 | 2 | B.1.438.1 | 0.000215 |
ORF6 | 26 | I26del | ATT | --- | 2 | 2 | B.1.466.2 | 0.000782 |
ORF6 | 26 | I26del | ATT | --- | 2 | 2 | B.1.524 | 0.002813 |
ORF6 | 26 | I26del | ATT | --- | 2 | 2 | B.1.554 | 0.008811 |
ORF6 | 26 | I26del | ATT | --- | 2 | 2 | B.1.575 | 0.000607 |
ORF6 | 26 | I26F | Att | Ttt | 2 | 2 | B.1.582 | 0.000981 |
ORF6 | 26 | I26del | ATT | --- | 2 | 2 | B.1.595 | 0.000522 |
ORF6 | 26 | I26del | ATT | --- | 2 | 2 | B.1.596 | 0.000174 |
ORF6 | 26 | I26F | Att | Ttt | 2 | 2 | B.1.617.2 | 0.000008 |
ORF6 | 26 | I26L | Att | Ctt | 2 | 2 | B.1.617.2 | 0.000008 |
ORF6 | 26 | I26del | ATT | --- | 2 | 2 | B.1.617.3 | 0.00597 |
ORF6 | 26 | I26V | Att | Gtt | 2 | 2 | C.36.3 | 0.001134 |
ORF6 | 26 | I26del | ATT | --- | 2 | 2 | D.2 | 0.00015 |
ORF6 | 26 | I26del1 | atT | at- | 2 | 2 | P.1 | 0.000032 |
ORF6 | 26 | I26del | ATT | --- | 2 | 2 | P.1.14 | 0.000096 |
ORF6 | 26 | I26V | Att | Gtt | 2 | 2 | Q.8 | 0.00033 |
ORF6 | 26 | I26del1 | Att | -tt | 1 | 1 | A | 0.000387 |
ORF6 | 26 | I26del | ATT | --- | 1 | 1 | A.1 | 0.000282 |
ORF6 | 26 | I26I | atT | atC | 1 | 1 | AE.8 | 0.000489 |
ORF6 | 26 | I26del | ATT | --- | 1 | 1 | AP.1 | 0.001502 |
ORF6 | 26 | I26del | ATT | --- | 1 | 1 | AU.1 | 0.001266 |
ORF6 | 26 | I26T | aTt | aCt | 1 | 1 | AY.100 | 0.000046 |
ORF6 | 26 | I26V | Att | Gtt | 1 | 1 | AY.101 | 0.00049 |
ORF6 | 26 | I26del | ATT | --- | 1 | 1 | AY.101 | 0.00049 |
ORF6 | 26 | I26L | Att | Ctt | 1 | 1 | AY.102 | 0.000027 |
ORF6 | 26 | I26F | Att | Ttt | 1 | 1 | AY.103 | 0.000006 |
ORF6 | 26 | I26del | ATT | --- | 1 | 1 | AY.108 | 0.001103 |
ORF6 | 26 | I26I | atT | atA | 1 | 1 | AY.110 | 0.000113 |
ORF6 | 26 | I26del | ATT | --- | 1 | 1 | AY.116 | 0.000287 |
ORF6 | 26 | I26del | ATT | --- | 1 | 1 | AY.117 | 0.000085 |
ORF6 | 26 | I26L | Att | Ctt | 1 | 1 | AY.118 | 0.000063 |
ORF6 | 26 | I26I | atT | atC | 1 | 1 | AY.119 | 0.000035 |
ORF6 | 26 | I26del2 | ATt | --t | 1 | 1 | AY.119 | 0.000035 |
ORF6 | 26 | I26del | ATT | --- | 1 | 1 | AY.120.1 | 0.000321 |
ORF6 | 26 | I26del | ATT | --- | 1 | 1 | AY.120.2.1 | 0.000498 |
ORF6 | 26 | I26del | ATT | --- | 1 | 1 | AY.121 | 0.000135 |
ORF6 | 26 | I26T | aTt | aCt | 1 | 1 | AY.121 | 0.000135 |
ORF6 | 26 | I26T | aTt | aCt | 1 | 1 | AY.14 | 0.000088 |
ORF6 | 26 | I26del | ATT | --- | 1 | 1 | AY.16 | 0.00038 |
ORF6 | 26 | I26T | aTt | aCt | 1 | 1 | AY.20 | 0.000039 |
ORF6 | 26 | I26del1 | Att | -tt | 1 | 1 | AY.25 | 0.000006 |
ORF6 | 26 | I26I | atT | atC | 1 | 1 | AY.25 | 0.000006 |
ORF6 | 26 | I26L | Att | Ctt | 1 | 1 | AY.26 | 0.000028 |
ORF6 | 26 | I26T | aTt | aCt | 1 | 1 | AY.26 | 0.000028 |
ORF6 | 26 | I26M | atT | atG | 1 | 1 | AY.26 | 0.000028 |
ORF6 | 26 | I26I | atT | atC | 1 | 1 | AY.26 | 0.000028 |
ORF6 | 26 | I26M | atT | atG | 1 | 1 | AY.27 | 0.000065 |
ORF6 | 26 | I26L | AtT | CtG | 1 | 1 | AY.29 | 0.000016 |
ORF6 | 26 | I26del1 | aTt | a-t | 1 | 1 | AY.29 | 0.000016 |
ORF6 | 26 | I26F | Att | Ttt | 1 | 1 | AY.29 | 0.000016 |
ORF6 | 26 | I26del | ATT | --- | 1 | 1 | AY.29.1 | 0.000221 |
ORF6 | 26 | I26del | ATT | --- | 1 | 1 | AY.30 | 0.000396 |
ORF6 | 26 | I26del | ATT | --- | 1 | 1 | AY.34.1 | 0.00051 |
ORF6 | 26 | I26N | aTt | aAt | 1 | 1 | AY.35 | 0.000233 |
ORF6 | 26 | I26V | Att | Gtt | 1 | 1 | AY.35 | 0.000233 |
ORF6 | 26 | I26V | Att | Gtt | 1 | 1 | AY.37 | 0.000316 |
ORF6 | 26 | I26del | ATT | --- | 1 | 1 | AY.37 | 0.000316 |
ORF6 | 26 | I26I | atT | atC | 1 | 1 | AY.38 | 0.000499 |
ORF6 | 26 | I26del | ATT | --- | 1 | 1 | AY.38 | 0.000499 |
ORF6 | 26 | I26N | aTT | aAC | 1 | 1 | AY.39 | 0.000025 |
ORF6 | 26 | I26T | aTt | aCt | 1 | 1 | AY.39 | 0.000025 |
ORF6 | 26 | I26I | atT | atC | 1 | 1 | AY.39 | 0.000025 |
ORF6 | 26 | I26F | Att | Ttt | 1 | 1 | AY.4 | 0.000002 |
ORF6 | 26 | I26del1 | Att | -tt | 1 | 1 | AY.4 | 0.000002 |
ORF6 | 26 | I26del | ATT | --- | 1 | 1 | AY.4.1 | 0.000737 |
ORF6 | 26 | I26M | atT | atG | 1 | 1 | AY.4.2 | 0.000022 |
ORF6 | 26 | I26V | Att | Gtt | 1 | 1 | AY.4.3 | 0.000842 |
ORF6 | 26 | I26L | Att | Ctt | 1 | 1 | AY.40 | 0.000964 |
ORF6 | 26 | I26del1 | Att | -tt | 1 | 1 | AY.42 | 0.00004 |
ORF6 | 26 | I26S | aTt | aGt | 1 | 1 | AY.43 | 0.000004 |
ORF6 | 26 | I26L | Att | Ctt | 1 | 1 | AY.43 | 0.000004 |
ORF6 | 26 | I26M | atT | atG | 1 | 1 | AY.43 | 0.000004 |
ORF6 | 26 | I26S | aTt | aGt | 1 | 1 | AY.44 | 0.000006 |
ORF6 | 26 | I26M | atT | atG | 1 | 1 | AY.44 | 0.000006 |
ORF6 | 26 | I26del | ATT | --- | 1 | 1 | AY.46.3 | 0.000934 |
ORF6 | 26 | I26N | aTt | aAt | 1 | 1 | AY.46.6 | 0.000072 |
ORF6 | 26 | I26V | Att | Gtt | 1 | 1 | AY.47 | 0.000031 |
ORF6 | 26 | I26I | atT | atC | 1 | 1 | AY.47 | 0.000031 |
ORF6 | 26 | I26del1 | aTt | a-t | 1 | 1 | AY.47 | 0.000031 |
ORF6 | 26 | I26V | Att | Gtt | 1 | 1 | AY.49 | 0.003195 |
ORF6 | 26 | I26del | ATT | --- | 1 | 1 | AY.5.3 | 0.000337 |
ORF6 | 26 | I26I | atT | atC | 1 | 1 | AY.55 | 0.000917 |
ORF6 | 26 | I26V | Att | Gtt | 1 | 1 | AY.55 | 0.000917 |
ORF6 | 26 | I26del | ATT | --- | 1 | 1 | AY.57 | 0.000656 |
ORF6 | 26 | I26del | ATT | --- | 1 | 1 | AY.59 | 0.00053 |
ORF6 | 26 | I26del | ATT | --- | 1 | 1 | AY.63 | 0.000387 |
ORF6 | 26 | I26I | atT | atC | 1 | 1 | AY.65 | 0.000533 |
ORF6 | 26 | I26V | Att | Gtt | 1 | 1 | AY.7 | 0.000196 |
ORF6 | 26 | I26N | aTt | aAt | 1 | 1 | AY.7.1 | 0.000113 |
ORF6 | 26 | I26I | atT | atC | 1 | 1 | AY.75.1 | 0.00018 |
ORF6 | 26 | I26L | Att | Ctt | 1 | 1 | AY.75.1 | 0.00018 |
ORF6 | 26 | I26V | Att | Gtt | 1 | 1 | AY.75.1 | 0.00018 |
ORF6 | 26 | I26del | ATT | --- | 1 | 1 | AY.79 | 0.001211 |
ORF6 | 26 | I26N | aTT | aAC | 1 | 1 | AY.85 | 0.000427 |
ORF6 | 26 | I26del | ATT | --- | 1 | 1 | AY.88 | 0.000884 |
ORF6 | 26 | I26L | Att | Ctt | 1 | 1 | AY.9.2 | 0.000037 |
ORF6 | 26 | I26del1 | aTt | a-t | 1 | 1 | AY.9.2 | 0.000037 |
ORF6 | 26 | I26V | Att | Gtt | 1 | 1 | AY.9.2 | 0.000037 |
ORF6 | 26 | I26del | ATT | --- | 1 | 1 | AY.9.2.1 | 0.001976 |
ORF6 | 26 | I26V | Att | Gtt | 1 | 1 | AY.92 | 0.000287 |
ORF6 | 26 | I26del1 | aTt | a-t | 1 | 1 | AY.94 | 0.000443 |
ORF6 | 26 | I26I | atT | atC | 1 | 1 | AY.94 | 0.000443 |
ORF6 | 26 | I26F | Att | Ttt | 1 | 1 | AY.96 | 0.002075 |
ORF6 | 26 | I26del | ATT | --- | 1 | 1 | AY.97 | 0.001701 |
ORF6 | 26 | I26del | ATT | --- | 1 | 1 | AY.99 | 0.001049 |
ORF6 | 26 | I26T | aTt | aCt | 1 | 1 | AY.99.2 | 0.000092 |
ORF6 | 26 | I26F | Att | Ttt | 1 | 1 | AY.99.2 | 0.000092 |
ORF6 | 26 | I26T | aTt | aCt | 1 | 1 | B | 0.000128 |
ORF6 | 26 | I26I | atT | atC | 1 | 1 | B | 0.000128 |
ORF6 | 26 | I26T | aTt | aCt | 1 | 1 | B.1 | 0.000009 |
ORF6 | 26 | I26M | atT | atG | 1 | 1 | B.1 | 0.000009 |
ORF6 | 26 | I26I | atT | atC | 1 | 1 | B.1 | 0.000009 |
ORF6 | 26 | I26M | atT | atG | 1 | 1 | B.1.1 | 0.000018 |
ORF6 | 26 | I26del1 | aTt | a-t | 1 | 1 | B.1.1 | 0.000018 |
ORF6 | 26 | I26N | aTT | aAC | 1 | 1 | B.1.1 | 0.000018 |
ORF6 | 26 | I26I | atT | atA | 1 | 1 | B.1.1.153 | 0.001095 |
ORF6 | 26 | I26V | Att | Gtt | 1 | 1 | B.1.1.198 | 0.001468 |
ORF6 | 26 | I26I | atT | atC | 1 | 1 | B.1.1.198 | 0.001468 |
ORF6 | 26 | I26T | aTt | aCt | 1 | 1 | B.1.1.214 | 0.000055 |
ORF6 | 26 | I26V | Att | Gtt | 1 | 1 | B.1.1.222 | 0.000204 |
ORF6 | 26 | I26del | ATT | --- | 1 | 1 | B.1.1.241 | 0.00207 |
ORF6 | 26 | I26del | ATT | --- | 1 | 1 | B.1.1.25 | 0.000569 |
ORF6 | 26 | I26M | atT | atG | 1 | 1 | B.1.1.294 | 0.001266 |
ORF6 | 26 | I26V | Att | Gtt | 1 | 1 | B.1.1.304 | 0.002809 |
ORF6 | 26 | I26del | ATT | --- | 1 | 1 | B.1.1.306 | 0.000438 |
ORF6 | 26 | I26del | ATT | --- | 1 | 1 | B.1.1.307 | 0.002532 |
ORF6 | 26 | I26del | ATT | --- | 1 | 1 | B.1.1.316 | 0.000925 |
ORF6 | 26 | I26T | aTt | aCt | 1 | 1 | B.1.1.318 | 0.000302 |
ORF6 | 26 | I26V | Att | Gtt | 1 | 1 | B.1.1.319 | 0.017544 |
ORF6 | 26 | I26del | ATT | --- | 1 | 1 | B.1.1.369 | 0.000446 |
ORF6 | 26 | I26del | ATT | --- | 1 | 1 | B.1.1.38 | 0.058824 |
ORF6 | 26 | I26del | ATT | --- | 1 | 1 | B.1.1.397 | 0.002252 |
ORF6 | 26 | I26L | Att | Ctt | 1 | 1 | B.1.1.424 | 0.045455 |
ORF6 | 26 | I26del | ATT | --- | 1 | 1 | B.1.1.434 | 0.000349 |
ORF6 | 26 | I26del | ATT | --- | 1 | 1 | B.1.1.50 | 0.000679 |
ORF6 | 26 | I26del | ATT | --- | 1 | 1 | B.1.1.51 | 0.001718 |
ORF6 | 26 | I26del | ATT | --- | 1 | 1 | B.1.1.63 | 0.000386 |
ORF6 | 26 | I26del | ATT | --- | 1 | 1 | B.1.1.70 | 0.000341 |
ORF6 | 26 | I26del | ATT | --- | 1 | 1 | B.1.1.8 | 0.003584 |
ORF6 | 26 | I26del | ATT | --- | 1 | 1 | B.1.1.83 | 0.00271 |
ORF6 | 26 | I26del | ATT | --- | 1 | 1 | B.1.110.3 | 0.000718 |
ORF6 | 26 | I26del | ATT | --- | 1 | 1 | B.1.131 | 0.008772 |
ORF6 | 26 | I26L | Att | Ctt | 1 | 1 | B.1.160 | 0.000031 |
ORF6 | 26 | I26del | ATT | --- | 1 | 1 | B.1.160 | 0.000031 |
ORF6 | 26 | I26I | atT | atC | 1 | 1 | B.1.177 | 0.000013 |
ORF6 | 26 | I26T | aTt | aCt | 1 | 1 | B.1.177 | 0.000013 |
ORF6 | 26 | I26N | aTt | aAt | 1 | 1 | B.1.177 | 0.000013 |
ORF6 | 26 | I26del | ATT | --- | 1 | 1 | B.1.177.17 | 0.000821 |
ORF6 | 26 | I26T | aTt | aCt | 1 | 1 | B.1.177.21 | 0.000076 |
ORF6 | 26 | I26del | ATT | --- | 1 | 1 | B.1.177.44 | 0.000519 |
ORF6 | 26 | I26del | ATT | --- | 1 | 1 | B.1.177.5 | 0.001242 |
ORF6 | 26 | I26del | ATT | --- | 1 | 1 | B.1.177.58 | 0.001332 |
ORF6 | 26 | I26del | ATT | --- | 1 | 1 | B.1.177.9 | 0.001332 |
ORF6 | 26 | I26del1 | aTt | a-t | 1 | 1 | B.1.2 | 0.000009 |
ORF6 | 26 | I26F | Att | Ttt | 1 | 1 | B.1.221.1 | 0.002907 |
ORF6 | 26 | I26del | ATT | --- | 1 | 1 | B.1.232 | 0.000537 |
ORF6 | 26 | I26del | ATT | --- | 1 | 1 | B.1.239 | 0.001221 |
ORF6 | 26 | I26V | Att | Gtt | 1 | 1 | B.1.241 | 0.000812 |
ORF6 | 26 | I26V | Att | Gtt | 1 | 1 | B.1.243 | 0.00007 |
ORF6 | 26 | I26F | Att | Ttt | 1 | 1 | B.1.258.11 | 0.000396 |
ORF6 | 26 | I26L | Att | Ctt | 1 | 1 | B.1.258.11 | 0.000396 |
ORF6 | 26 | I26del | ATT | --- | 1 | 1 | B.1.258.17 | 0.000104 |
ORF6 | 26 | I26del | ATT | --- | 1 | 1 | B.1.260 | 0.003344 |
ORF6 | 26 | I26del | ATT | --- | 1 | 1 | B.1.319 | 0.003049 |
ORF6 | 26 | I26del1 | aTt | a-t | 1 | 1 | B.1.329 | 0.000608 |
ORF6 | 26 | I26del2 | aTT | a-- | 1 | 1 | B.1.351 | 0.00003 |
ORF6 | 26 | I26I | atT | atC | 1 | 1 | B.1.351 | 0.00003 |
ORF6 | 26 | I26del | ATT | --- | 1 | 1 | B.1.36.1 | 0.00114 |
ORF6 | 26 | I26del | ATT | --- | 1 | 1 | B.1.36.24 | 0.006173 |
ORF6 | 26 | I26del | ATT | --- | 1 | 1 | B.1.36.29 | 0.000517 |
ORF6 | 26 | I26del | ATT | --- | 1 | 1 | B.1.36.38 | 0.001642 |
ORF6 | 26 | I26del | ATT | --- | 1 | 1 | B.1.362 | 0.001541 |
ORF6 | 26 | I26del | ATT | --- | 1 | 1 | B.1.391 | 0.001127 |
ORF6 | 26 | I26del | ATT | --- | 1 | 1 | B.1.396 | 0.000706 |
ORF6 | 26 | I26del1 | aTt | a-t | 1 | 1 | B.1.396 | 0.000706 |
ORF6 | 26 | I26N | aTt | aAt | 1 | 1 | B.1.416 | 0.001269 |
ORF6 | 26 | I26T | aTt | aCt | 1 | 1 | B.1.427 | 0.00005 |
ORF6 | 26 | I26N | aTt | aAt | 1 | 1 | B.1.429 | 0.000024 |
ORF6 | 26 | I26del | ATT | --- | 1 | 1 | B.1.429.1 | 0.012048 |
ORF6 | 26 | I26del | ATT | --- | 1 | 1 | B.1.462 | 0.007246 |
ORF6 | 26 | I26V | Att | Gtt | 1 | 1 | B.1.466.2 | 0.000391 |
ORF6 | 26 | I26del | ATT | --- | 1 | 1 | B.1.469 | 0.00361 |
ORF6 | 26 | I26T | aTt | aCt | 1 | 1 | B.1.517 | 0.000427 |
ORF6 | 26 | I26L | Att | Ctt | 1 | 1 | B.1.525 | 0.000113 |
ORF6 | 26 | I26S | aTt | aGt | 1 | 1 | B.1.526 | 0.000024 |
ORF6 | 26 | I26V | Att | Gtt | 1 | 1 | B.1.526 | 0.000024 |
ORF6 | 26 | I26T | aTt | aCt | 1 | 1 | B.1.526 | 0.000024 |
ORF6 | 26 | I26del1 | Att | -tt | 1 | 1 | B.1.526 | 0.000024 |
ORF6 | 26 | I26I | atT | atC | 1 | 1 | B.1.565 | 0.00081 |
ORF6 | 26 | I26del | ATT | --- | 1 | 1 | B.1.565 | 0.00081 |
ORF6 | 26 | I26del | ATT | --- | 1 | 1 | B.1.576 | 0.000907 |
ORF6 | 26 | I26del1 | Att | -tt | 1 | 1 | B.1.596 | 0.000087 |
ORF6 | 26 | I26V | Att | Gtt | 1 | 1 | B.1.596 | 0.000087 |
ORF6 | 26 | I26N | aTt | aAt | 1 | 1 | B.1.617.2 | 0.000004 |
ORF6 | 26 | I26M | atT | atG | 1 | 1 | B.1.617.2 | 0.000004 |
ORF6 | 26 | I26del1 | Att | -tt | 1 | 1 | B.1.617.2 | 0.000004 |
ORF6 | 26 | I26S | aTt | aGt | 1 | 1 | B.1.617.2 | 0.000004 |
ORF6 | 26 | I26del | ATT | --- | 1 | 1 | B.1.627 | 0.00202 |
ORF6 | 26 | I26V | Att | Gtt | 1 | 1 | B.1.629 | 0.013333 |
ORF6 | 26 | I26del | ATT | --- | 1 | 1 | B.1.9.3 | 0.038462 |
ORF6 | 26 | I26del | ATT | --- | 1 | 1 | B.31 | 0.003731 |
ORF6 | 26 | I26F | Att | Ttt | 1 | 1 | B.6.6 | 0.000889 |
ORF6 | 26 | I26del | ATT | --- | 1 | 1 | C.2.1 | 0.006667 |
ORF6 | 26 | I26del | ATT | --- | 1 | 1 | C.36.3 | 0.000567 |
ORF6 | 26 | I26del | ATT | --- | 1 | 1 | C.36.3.1 | 0.002717 |
ORF6 | 26 | I26del | ATT | --- | 1 | 1 | N.10 | 0.029412 |
ORF6 | 26 | I26I | atT | atC | 1 | 1 | P.1 | 0.000016 |
ORF6 | 26 | I26del | ATT | --- | 1 | 1 | P.1.1 | 0.000318 |
ORF6 | 26 | I26V | Att | Gtt | 1 | 1 | P.1.14 | 0.000048 |
ORF6 | 26 | I26del2 | ATt | --t | 1 | 1 | P.1.15 | 0.000232 |
ORF6 | 26 | I26del | ATT | --- | 1 | 1 | P.1.16 | 0.000374 |
ORF6 | 26 | I26del | ATT | --- | 1 | 1 | P.1.7 | 0.000319 |
ORF6 | 26 | I26del | ATT | --- | 1 | 1 | Q.1 | 0.000126 |
ORF6 | 26 | I26del | ATT | --- | 1 | 1 | Q.8 | 0.000165 |
ORF6 | 26 | I26F | Att | Ttt | 1 | 1 | R.1 | 0.00009 |
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CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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