CoV-GLUEGenomeCountriesLineagesMutationsInsertionsDeletionsUpdated:

CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF6 : CodonNum = 2

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF62F2deldelTTT---88958895127205-27207
ORF62F2SnonsyntTttCt258625840.99922727205-27207
ORF62F2SnonsynTTtAGt258610.00038669827205-27207
ORF62F2SnonsyntTTtCG258610.00038669827205-27207
ORF62F2FsynttTttC254254127205-27207
ORF62F2del1delTtt-tt2031870.92118227205-27207
ORF62F2del1delttTtt-203150.073891627205-27207
ORF62F2del1delTtTNt-20310.0049261127205-27207
ORF62F2LnonsynTttCtt1861560.8387127205-27207
ORF62F2LnonsynttTttG186130.069892527205-27207
ORF62F2LnonsynttTttA186110.059139827205-27207
ORF62F2LnonsynTtTCtG18650.026881727205-27207
ORF62F2LnonsynTtTCtA18610.0053763427205-27207
ORF62F2YnonsyntTttAt3131127205-27207
ORF62F2del2deltTTt--30270.927205-27207
ORF62F2del2delTTt--t3020.066666727205-27207
ORF62F2del2delTTT--C3010.033333327205-27207
ORF62F2MnonsynTtTAtG2020127205-27207
ORF62F2CnonsyntTttGt1919127205-27207
ORF62F2InonsynTttAtt1290.7527205-27207
ORF62F2InonsynTtTAtA1230.2527205-27207
ORF62F2VnonsynTttGtt55127205-27207
ORF62F2XnonsyntTTtAA540.827205-27207
ORF62F2XnonsyntTTtAG510.227205-27207
ORF62F2HnonsynTTtCAt44127205-27207
ORF62F2NnonsynTTtAAt33127205-27207
ORF62F2KnonsynTTTAAA22127205-27207
ORF62F2PnonsynTTtCCt210.527205-27207
ORF62F2PnonsynTTTCCG210.527205-27207
ORF62F2QnonsynTTTCAA11127205-27207
ORF62F2DnonsynTTTGAC11127205-27207

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF62F2delTTT---88958895All0.001701
ORF62F2delTTT---84368436B.1.5250.954623
ORF62F2StTttCt25842586All0.000494
ORF62F2StTTtCG12586All0
ORF62F2STTtAGt12586All0
ORF62F2StTttCt10191019B.1.10.018486
ORF62F2StTttCt746746B.1.1600.023266
ORF62F2FttTttC254254All0.000049
ORF62F2StTttCt239240B.10.002189
ORF62F2STTtAGt1240B.10.000009
ORF62F2del1Ttt-tt187203All0.000036
ORF62F2del1ttTtt-15203All0.000003
ORF62F2del1TtTNt-1203All0
ORF62F2LTttCtt156186All0.00003
ORF62F2LttTttG13186All0.000002
ORF62F2LttTttA11186All0.000002
ORF62F2LTtTCtG5186All0.000001
ORF62F2LTtTCtA1186All0
ORF62F2delTTT---149149B.1.177.210.011394
ORF62F2StTttCt133133P.10.002095
ORF62F2StTttCt124124B.1.1.2940.156962
ORF62F2FttTttC4747B.1.1.70.000042
ORF62F2StTttCt4444B.1.1.70.000039
ORF62F2LTttCtt4143B.1.1.70.000037
ORF62F2LttTttA243B.1.1.70.000002
ORF62F2delTTT---4141B.10.000376
ORF62F2delTTT---3737B.1.1.70.000033
ORF62F2delTTT---3636AY.40.000056
ORF62F2StTttCt3535M.10.813953
ORF62F2del1Ttt-tt2933B.1.1.70.000026
ORF62F2del1ttTtt-333B.1.1.70.000003
ORF62F2del1TtTNt-133B.1.1.70.000001
ORF62F2StTttCt3232B.1.1.1410.064386
ORF62F2YtTttAt3131All0.000006
ORF62F2StTttCt3131B.1.1.5190.001231
ORF62F2del2tTTt--2730All0.000005
ORF62F2del2TTt--t230All0
ORF62F2del2TTT--C130All0
ORF62F2FttTttC2626B.10.000238
ORF62F2StTttCt2525B.1.1.4190.185185
ORF62F2FttTttC2222B.1.177.440.011417
ORF62F2MTtTAtG2020All0.000004
ORF62F2delTTT---2020B.1.20.000176
ORF62F2StTttCt2020B.1.3950.140845
ORF62F2CtTttGt1919All0.000004
ORF62F2del1Ttt-tt1619AY.40.000025
ORF62F2del1ttTtt-319AY.40.000005
ORF62F2del1Ttt-tt1819B.10.000165
ORF62F2del1ttTtt-119B.10.000009
ORF62F2FttTttC1919B.1.4270.000959
ORF62F2MTtTAtG1919B.1.5250.00215
ORF62F2delTTT---1717B.1.617.20.000064
ORF62F2CtTttGt1616B.1.1.70.000014
ORF62F2LTttCtt1414AY.30.000139
ORF62F2ITttAtt912All0.000002
ORF62F2ITtTAtA312All0.000001
ORF62F2delTTT---1212AY.1030.000075
ORF62F2YtTttAt1212B.1.5250.001358
ORF62F2StTttCt1111AY.40.000017
ORF62F2FttTttC1111AY.440.000067
ORF62F2del1Ttt-tt1111AY.470.000342
ORF62F2StTttCt1111B.1.1.3330.011841
ORF62F2LTttCtt99AY.250.000054
ORF62F2delTTT---99AY.250.000054
ORF62F2del1Ttt-tt79AY.250.000042
ORF62F2del1ttTtt-29AY.250.000012
ORF62F2FttTttC99B.1.10.000163
ORF62F2StTttCt99B.1.1.500.00611
ORF62F2StTttCt99B.1.617.20.000034
ORF62F2del1Ttt-tt99P.10.000142
ORF62F2FttTttC88AY.1030.00005
ORF62F2FttTttC88AY.260.000226
ORF62F2delTTT---88AY.430.000035
ORF62F2delTTT---88B0.001022
ORF62F2FttTttC88B.1.1.1760.003515
ORF62F2del1Ttt-tt77AY.1030.000043
ORF62F2LTttCtt77AY.140.000616
ORF62F2delTTT---77AY.290.00011
ORF62F2FttTttC77AY.40.000011
ORF62F2del1Ttt-tt77AY.430.000031
ORF62F2delTTT---77B.1.10.000127
ORF62F2FttTttC77B.1.177.730.003964
ORF62F2LTttCtt77B.1.177.750.007284
ORF62F2LTtTCtG47B.1.5250.000453
ORF62F2LttTttG37B.1.5250.000339
ORF62F2LTttCtt77P.10.00011
ORF62F2del2tTTt--66AY.30.00006
ORF62F2delTTT---66AY.30.00006
ORF62F2StTttCt66AY.690.00112
ORF62F2LTttCtt36B.1.10.000054
ORF62F2LttTttA26B.1.10.000036
ORF62F2LttTttG16B.1.10.000018
ORF62F2StTttCt66B.1.1770.000079
ORF62F2FttTttC66B.1.617.20.000023
ORF62F2FttTttC66P.1.150.001394
ORF62F2VTttGtt55All0.000001
ORF62F2XtTTtAA45All0.000001
ORF62F2XtTTtAG15All0
ORF62F2del1Ttt-tt55AY.260.000142
ORF62F2delTTT---55AY.39.10.000198
ORF62F2LttTttG35AY.40.000005
ORF62F2LttTttA15AY.40.000002
ORF62F2LTttCtt15AY.40.000002
ORF62F2LTttCtt45AY.430.000018
ORF62F2LttTttG15AY.430.000004
ORF62F2FttTttC55B.1.1.3750.059524
ORF62F2FttTttC55B.1.1600.000156
ORF62F2del1Ttt-tt55B.1.177.40.001055
ORF62F2del1Ttt-tt55B.1.20.000044
ORF62F2FttTttC55B.1.20.000044
ORF62F2StTttCt55B.1.360.00073
ORF62F2StTttCt55B.1.3690.001426
ORF62F2StTttCt55B.1.6090.002397
ORF62F2LTttCtt55B.1.617.20.000019
ORF62F2del1Ttt-tt55B.1.617.20.000019
ORF62F2HTTtCAt44All0.000001
ORF62F2del2tTTt--44AY.1030.000025
ORF62F2delTTT---44AY.340.000388
ORF62F2delTTT---44AY.440.000024
ORF62F2del2tTTt--44AY.60.000165
ORF62F2LttTttA24AY.750.000112
ORF62F2LTtTCtA14AY.750.000056
ORF62F2LTttCtt14AY.750.000056
ORF62F2del1Ttt-tt44AY.98.10.000194
ORF62F2ITttAtt44B.10.000037
ORF62F2LTttCtt44B.1.1.5160.266667
ORF62F2StTttCt44B.1.1.630.001543
ORF62F2del2tTTt--44B.1.1.70.000004
ORF62F2FttTttC44B.1.1770.000053
ORF62F2LTttCtt44B.1.20.000035
ORF62F2NTTtAAt33All0.000001
ORF62F2del1Ttt-tt33AY.1190.000106
ORF62F2StTttCt33AY.30.00003
ORF62F2delTTT---33AY.380.001498
ORF62F2delTTT---33AY.420.000121
ORF62F2StTttCt33AY.440.000018
ORF62F2delTTT---33AY.470.000093
ORF62F2delTTT---33AY.50.000062
ORF62F2delTTT---33AY.590.001589
ORF62F2delTTT---33AY.60.000123
ORF62F2LttTttG13AY.990.001049
ORF62F2LTttCtt13AY.990.001049
ORF62F2LTtTCtG13AY.990.001049
ORF62F2delTTT---33B.1.1.3180.000905
ORF62F2del1Ttt-tt33B.1.1.330.001263
ORF62F2LTttCtt33B.1.1.330.001263
ORF62F2delTTT---33B.1.1600.000094
ORF62F2LTttCtt33B.1.1770.00004
ORF62F2LTttCtt23B.1.177.210.000153
ORF62F2LttTttG13B.1.177.210.000076
ORF62F2YtTttAt33B.1.20.000026
ORF62F2StTttCt33B.1.2580.0002
ORF62F2LTttCtt33B.1.3690.000856
ORF62F2StTttCt33B.1.5090.002597
ORF62F2HTTtCAt33B.1.5250.000339
ORF62F2StTttCt33B.1.5960.000261
ORF62F2KTTTAAA22All0
ORF62F2PTTTCCG12All0
ORF62F2PTTtCCt12All0
ORF62F2delTTT---22AY.1000.000092
ORF62F2del1Ttt-tt22AY.1000.000092
ORF62F2delTTT---22AY.1020.000053
ORF62F2StTttCt22AY.1030.000012
ORF62F2XtTTtAA12AY.1130.000142
ORF62F2LttTttG12AY.1130.000142
ORF62F2del1Ttt-tt12AY.1130.000142
ORF62F2XtTTtAG12AY.1130.000142
ORF62F2LttTttA12AY.1130.000142
ORF62F2del1ttTtt-12AY.1130.000142
ORF62F2delTTT---22AY.1180.000125
ORF62F2del1Ttt-tt22AY.1200.000074
ORF62F2delTTT---22AY.1200.000074
ORF62F2FttTttC22AY.1200.000074
ORF62F2del1Ttt-tt22AY.130.000322
ORF62F2delTTT---22AY.16.10.00094
ORF62F2FttTttC22AY.200.000078
ORF62F2del1Ttt-tt22AY.340.000194
ORF62F2FttTttC22AY.350.000466
ORF62F2delTTT---22AY.360.000296
ORF62F2del1Ttt-tt22AY.380.000999
ORF62F2del1Ttt-tt22AY.390.000049
ORF62F2LTttCtt22AY.4.20.000043
ORF62F2del1Ttt-tt22AY.4.20.000043
ORF62F2del1Ttt-tt22AY.440.000012
ORF62F2LTttCtt22AY.440.000012
ORF62F2delTTT---22AY.450.000243
ORF62F2YtTttAt22AY.470.000062
ORF62F2del1Ttt-tt22AY.50.000041
ORF62F2delTTT---22AY.670.000929
ORF62F2FttTttC22AY.690.000373
ORF62F2delTTT---22AY.710.00095
ORF62F2delTTT---22AY.740.000231
ORF62F2YtTttAt22AY.750.000112
ORF62F2XtTTtAA22AY.750.000112
ORF62F2ITttAtt12AY.750.000056
ORF62F2ITtTAtA12AY.750.000056
ORF62F2LTttCtt22AY.9.20.000073
ORF62F2delTTT---22AY.900.001369
ORF62F2PTTTCCG12AY.990.001049
ORF62F2PTTtCCt12AY.990.001049
ORF62F2StTTtCG12AY.990.001049
ORF62F2StTttCt12AY.990.001049
ORF62F2LTttCtt22B.10.000018
ORF62F2YtTttAt22B.10.000018
ORF62F2del1Ttt-tt22B.1.10.000036
ORF62F2ITttAtt12B.1.10.000018
ORF62F2ITtTAtA12B.1.10.000018
ORF62F2StTttCt22B.1.1.1760.000879
ORF62F2LTttCtt22B.1.1.2220.000408
ORF62F2FttTttC22B.1.1.250.001137
ORF62F2LTttCtt22B.1.1.250.001137
ORF62F2StTttCt22B.1.1.3060.000877
ORF62F2del1Ttt-tt22B.1.1.3060.000877
ORF62F2StTttCt22B.1.1.3070.005063
ORF62F2StTttCt22B.1.1.3180.000604
ORF62F2StTttCt22B.1.1.3720.001377
ORF62F2FttTttC22B.1.1.3960.090909
ORF62F2StTttCt22B.1.1.4480.004065
ORF62F2FttTttC22B.1.1.5190.000079
ORF62F2YtTttAt22B.1.1.70.000002
ORF62F2ITttAtt12B.1.1.70.000001
ORF62F2ITtTAtA12B.1.1.70.000001
ORF62F2FttTttC22B.1.1110.00235
ORF62F2YtTttAt22B.1.1770.000026
ORF62F2del1Ttt-tt22B.1.1770.000026
ORF62F2FttTttC22B.1.2580.000133
ORF62F2delTTT---22B.1.4230.020408
ORF62F2del1Ttt-tt22B.1.5260.000047
ORF62F2LTttCtt22B.1.617.10.000258
ORF62F2del1Ttt-tt22B.1.6210.000177
ORF62F2StTttCt22B.1.910.004149
ORF62F2StTttCt22C.160.002121
ORF62F2FttTttC22P.10.000032
ORF62F2LTttCtt22Q.40.00091
ORF62F2LttTttG11A0.000387
ORF62F2YtTttAt11A0.000387
ORF62F2del2tTTt--11AB.10.008197
ORF62F2LttTttA11AD.20.000219
ORF62F2QTTTCAA11All0
ORF62F2DTTTGAC11All0
ORF62F2delTTT---11AY.10.000396
ORF62F2FttTttC11AY.100.00053
ORF62F2FttTttC11AY.1020.000027
ORF62F2LttTttA11AY.1030.000006
ORF62F2del1Ttt-tt11AY.1110.000183
ORF62F2YtTttAt11AY.1130.000142
ORF62F2del1Ttt-tt11AY.1160.000287
ORF62F2del1Ttt-tt11AY.1170.000085
ORF62F2del1Ttt-tt11AY.1180.000063
ORF62F2delTTT---11AY.1190.000035
ORF62F2FttTttC11AY.120.10.000321
ORF62F2FttTttC11AY.1210.000135
ORF62F2StTttCt11AY.210.001898
ORF62F2delTTT---11AY.230.00007
ORF62F2FttTttC11AY.240.000431
ORF62F2StTttCt11AY.250.000006
ORF62F2FttTttC11AY.250.000006
ORF62F2del2tTTt--11AY.260.000028
ORF62F2LTttCtt11AY.290.000016
ORF62F2StTttCt11AY.29.10.000221
ORF62F2del1Ttt-tt11AY.30.00001
ORF62F2LTttCtt11AY.3.10.000085
ORF62F2StTttCt11AY.300.000396
ORF62F2del1Ttt-tt11AY.310.018519
ORF62F2FttTttC11AY.330.000067
ORF62F2del1Ttt-tt11AY.34.10.00051
ORF62F2del1ttTtt-11AY.350.000233
ORF62F2delTTT---11AY.370.000316
ORF62F2VTttGtt11AY.370.000316
ORF62F2delTTT---11AY.390.000025
ORF62F2CtTttGt11AY.390.000025
ORF62F2FttTttC11AY.4.20.000022
ORF62F2del1Ttt-tt11AY.420.00004
ORF62F2FttTttC11AY.430.000004
ORF62F2del2TTt--t11AY.440.000006
ORF62F2StTttCt11AY.46.50.000198
ORF62F2StTttCt11AY.470.000031
ORF62F2LTttCtt11AY.470.000031
ORF62F2FttTttC11AY.470.000031
ORF62F2del1Ttt-tt11AY.540.000095
ORF62F2del2tTTt--11AY.540.000095
ORF62F2delTTT---11AY.580.000907
ORF62F2StTttCt11AY.610.000105
ORF62F2delTTT---11AY.610.000105
ORF62F2del1Ttt-tt11AY.640.000595
ORF62F2del1Ttt-tt11AY.740.000116
ORF62F2QTTTCAA11AY.750.000056
ORF62F2NTTtAAt11AY.750.000056
ORF62F2HTTtCAt11AY.750.000056
ORF62F2KTTTAAA11AY.750.000056
ORF62F2delTTT---11AY.760.004831
ORF62F2delTTT---11AY.820.001357
ORF62F2StTttCt11AY.840.000437
ORF62F2delTTT---11AY.880.000884
ORF62F2del1Ttt-tt11AY.920.000287
ORF62F2del2tTTt--11AY.980.000079
ORF62F2LTttCtt11AY.980.000079
ORF62F2delTTT---11AZ.10.000867
ORF62F2StTttCt11B0.000128
ORF62F2LTttCtt11B0.000128
ORF62F2NTTtAAt11B.10.000009
ORF62F2DTTTGAC11B.10.000009
ORF62F2CtTttGt11B.10.000009
ORF62F2VTttGtt11B.10.000009
ORF62F2del2tTTt--11B.10.000009
ORF62F2del2tTTt--11B.1.10.000018
ORF62F2MTtTAtG11B.1.10.000018
ORF62F2LTttCtt11B.1.1.2140.000055
ORF62F2StTttCt11B.1.1.2200.001859
ORF62F2StTttCt11B.1.1.250.000569
ORF62F2del1Ttt-tt11B.1.1.250.000569
ORF62F2delTTT---11B.1.1.250.000569
ORF62F2delTTT---11B.1.1.2630.001558
ORF62F2delTTT---11B.1.1.2940.001266
ORF62F2LTttCtt11B.1.1.3060.000438
ORF62F2StTttCt11B.1.1.3110.000358
ORF62F2LTttCtt11B.1.1.3120.001912
ORF62F2delTTT---11B.1.1.330.000421
ORF62F2LTttCtt11B.1.1.3310.011628
ORF62F2delTTT---11B.1.1.3970.002252
ORF62F2FttTttC11B.1.1.4090.002833
ORF62F2delTTT---11B.1.1.4130.006897
ORF62F2StTttCt11B.1.1.4160.000905
ORF62F2YtTttAt11B.1.1.5150.02
ORF62F2del1ttTtt-11B.1.1.5190.00004
ORF62F2del2tTTt--11B.1.1.5190.00004
ORF62F2LTttCtt11B.1.1.5190.00004
ORF62F2delTTT---11B.1.1.5190.00004
ORF62F2StTttCt11B.1.1.5250.005464
ORF62F2VTttGtt11B.1.1.70.000001
ORF62F2XtTTtAA11B.1.1.70.000001
ORF62F2NTTtAAt11B.1.1.70.000001
ORF62F2KTTTAAA11B.1.1.70.000001
ORF62F2del1Ttt-tt11B.1.1.700.000341
ORF62F2delTTT---11B.1.1150.021739
ORF62F2StTttCt11B.1.1280.000635
ORF62F2VTttGtt11B.1.1470.000756
ORF62F2del1Ttt-tt11B.1.1600.000031
ORF62F2del1ttTtt-11B.1.160.320.004292
ORF62F2CtTttGt11B.1.1770.000013
ORF62F2delTTT---11B.1.1770.000013
ORF62F2StTttCt11B.1.177.160.000664
ORF62F2YtTttAt11B.1.177.210.000076
ORF62F2StTttCt11B.1.177.210.000076
ORF62F2ITttAtt11B.1.177.210.000076
ORF62F2FttTttC11B.1.177.330.001645
ORF62F2delTTT---11B.1.177.440.000519
ORF62F2LTttCtt11B.1.177.440.000519
ORF62F2FttTttC11B.1.177.510.004566
ORF62F2del1Ttt-tt11B.1.177.70.000165
ORF62F2delTTT---11B.1.177.70.000165
ORF62F2StTttCt11B.1.177.730.000566
ORF62F2LTttCtt11B.1.177.810.000189
ORF62F2del2tTTt--11B.1.20.000009
ORF62F2FttTttC11B.1.2210.000071
ORF62F2delTTT---11B.1.2400.000216
ORF62F2StTttCt11B.1.2430.00007
ORF62F2delTTT---11B.1.2580.000067
ORF62F2del1Ttt-tt11B.1.258.110.000396
ORF62F2delTTT---11B.1.258.170.000104
ORF62F2FttTttC11B.1.258.170.000104
ORF62F2del1Ttt-tt11B.1.2890.00266
ORF62F2StTttCt11B.1.3490.000715
ORF62F2delTTT---11B.1.3510.00003
ORF62F2StTttCt11B.1.3510.00003
ORF62F2FttTttC11B.1.3510.00003
ORF62F2YtTttAt11B.1.360.000146
ORF62F2LTttCtt11B.1.36.220.001208
ORF62F2delTTT---11B.1.36.290.000517
ORF62F2YtTttAt11B.1.36.380.001642
ORF62F2del1Ttt-tt11B.1.3610.001289
ORF62F2LTttCtt11B.1.3610.001289
ORF62F2StTttCt11B.1.3620.001541
ORF62F2LttTttA11B.1.3620.001541
ORF62F2delTTT---11B.1.3890.001002
ORF62F2FttTttC11B.1.3960.000706
ORF62F2StTttCt11B.1.4000.000429
ORF62F2del2tTTt--11B.1.4210.007463
ORF62F2LTttCtt11B.1.4270.00005
ORF62F2StTttCt11B.1.4270.00005
ORF62F2StTttCt11B.1.4290.000024
ORF62F2del1Ttt-tt11B.1.4290.000024
ORF62F2LTttCtt11B.1.4290.000024
ORF62F2FttTttC11B.1.438.10.000107
ORF62F2FttTttC11B.1.438.40.021277
ORF62F2LTttCtt11B.1.466.20.000391
ORF62F2del1Ttt-tt11B.1.4700.001404
ORF62F2StTttCt11B.1.4700.001404
ORF62F2delTTT---11B.1.4940.034483
ORF62F2FttTttC11B.1.4990.00105
ORF62F2FttTttC11B.1.5070.011236
ORF62F2ITttAtt11B.1.5250.000113
ORF62F2StTttCt11B.1.5250.000113
ORF62F2del2TTt--t11B.1.5250.000113
ORF62F2FttTttC11B.1.5260.000024
ORF62F2delTTT---11B.1.5260.000024
ORF62F2StTttCt11B.1.5600.00463
ORF62F2VTttGtt11B.1.5770.000687
ORF62F2FttTttC11B.1.5800.004065
ORF62F2delTTT---11B.1.5800.004065
ORF62F2LTttCtt11B.1.5820.000491
ORF62F2StTttCt11B.1.5890.007576
ORF62F2delTTT---11B.1.5960.000087
ORF62F2StTttCt11B.1.5980.016949
ORF62F2LTttCtt11B.1.6090.000479
ORF62F2FttTttC11B.1.6090.000479
ORF62F2del2TTT--C11B.1.6090.000479
ORF62F2delTTT---11B.1.6100.003546
ORF62F2delTTT---11B.1.617.30.002985
ORF62F2FttTttC11B.1.619.10.000641
ORF62F2delTTT---11B.1.6210.000089
ORF62F2StTttCt11B.1.6230.000536
ORF62F2del1Ttt-tt11B.1.6370.000073
ORF62F2LTttCtt11B.1.930.000934
ORF62F2LttTttG11B.290.003509
ORF62F2LTttCtt11B.400.000364
ORF62F2FttTttC11B.550.00295
ORF62F2del1ttTtt-11B.60.00091
ORF62F2FttTttC11C.160.00106
ORF62F2del1ttTtt-11C.350.000774
ORF62F2FttTttC11C.360.000911
ORF62F2delTTT---11N.50.001767
ORF62F2delTTT---11P.10.000016
ORF62F2FttTttC11P.1.10.000318
ORF62F2delTTT---11P.1.140.000048
ORF62F2del1Ttt-tt11P.1.170.000162
ORF62F2FttTttC11P.1.40.000977
ORF62F2del1Ttt-tt11P.1.70.000319
ORF62F2delTTT---11Q.20.000613
ORF62F2delTTT---11Q.80.000165
ORF62F2delTTT---11R.10.00009
ORF62F2FttTttC11R.10.00009

CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk

CoV-GLUE uses sequence data from GISAID. GISAID data provided via this web application is subject to GISAID's Terms and Conditions.