CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF3a : Mut = Y109del2

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF3a109Y109del2delTAt--t1270.58333325717-25719
ORF3a109Y109del2deltATt--1250.41666725717-25719

Details of the mutation Y109del2 within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF3a109Y109del2TAt--t712All0.000001
ORF3a109Y109del2tATt--512All0.000001
ORF3a109Y109del2tATt--34AY.40.000005
ORF3a109Y109del2TAt--t14AY.40.000002
ORF3a109Y109del2TAt--t23B.1.1.70.000002
ORF3a109Y109del2tATt--13B.1.1.70.000001
ORF3a109Y109del2TAt--t22AY.250.000012
ORF3a109Y109del2TAt--t12AY.430.000004
ORF3a109Y109del2tATt--12AY.430.000004
ORF3a109Y109del2TAt--t11AY.30.00001