CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF3a : Mut = V88A

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF3a88V88AnonsyngTagCa3443410.99127925654-25656
ORF3a88V88AnonsyngTAgCT34420.0058139525654-25656
ORF3a88V88AnonsyngTAgCG34410.0029069825654-25656

Details of the mutation V88A within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF3a88V88AgTagCa341344All0.000065
ORF3a88V88AgTAgCT2344All0
ORF3a88V88AgTAgCG1344All0
ORF3a88V88AgTagCa9898AY.440.000597
ORF3a88V88AgTagCa6868B.301
ORF3a88V88AgTagCa4747AY.40.000073
ORF3a88V88AgTagCa2626AY.46.60.001877
ORF3a88V88AgTagCa1414AY.60.000576
ORF3a88V88AgTagCa1010AY.30.000099
ORF3a88V88AgTagCa99B.1.1770.000119
ORF3a88V88AgTagCa77B.1.1.2530.017544
ORF3a88V88AgTagCa77B.1.1.70.000006
ORF3a88V88AgTagCa77B.1.617.20.000026
ORF3a88V88AgTagCa66B.1.177.70.000989
ORF3a88V88AgTagCa35AY.250.000018
ORF3a88V88AgTAgCT25AY.250.000012
ORF3a88V88AgTagCa44B.1.1.2200.007435
ORF3a88V88AgTagCa33AY.1210.000406
ORF3a88V88AgTagCa33AY.340.000291
ORF3a88V88AgTagCa22AY.1030.000012
ORF3a88V88AgTagCa22AY.50.000041
ORF3a88V88AgTagCa22B.1.4290.000047
ORF3a88V88AgTagCa22B.1.5610.000794
ORF3a88V88AgTagCa22P.10.000032
ORF3a88V88AgTagCa11AY.1000.000046
ORF3a88V88AgTagCa11AY.1020.000027
ORF3a88V88AgTagCa11AY.1170.000085
ORF3a88V88AgTagCa11AY.1190.000035
ORF3a88V88AgTagCa11AY.120.2.10.000498
ORF3a88V88AgTagCa11AY.240.000431
ORF3a88V88AgTagCa11AY.260.000028
ORF3a88V88AgTagCa11AY.390.000025
ORF3a88V88AgTagCa11AY.4.20.000022
ORF3a88V88AgTagCa11AY.540.000095
ORF3a88V88AgTagCa11AY.590.00053
ORF3a88V88AgTagCa11AY.890.004902
ORF3a88V88AgTAgCG11AY.9.20.000037
ORF3a88V88AgTagCa11AY.99.20.000092
ORF3a88V88AgTagCa11B.10.000009
ORF3a88V88AgTagCa11B.1.10.000018
ORF3a88V88AgTagCa11B.1.1.3060.000438
ORF3a88V88AgTagCa11B.1.1.3860.066667
ORF3a88V88AgTagCa11B.1.5090.000866
ORF3a88V88AgTagCa11D.20.000075