CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF3a : Mut = V50A

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF3a50V50AnonsyngTtgCt8798780.99886225540-25542
ORF3a50V50AnonsyngTTgCG87910.0011376625540-25542

Details of the mutation V50A within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF3a50V50AgTtgCt878879All0.000168
ORF3a50V50AgTTgCG1879All0
ORF3a50V50AgTtgCt597597A.270.988411
ORF3a50V50AgTtgCt117117B.1.1.70.000105
ORF3a50V50AgTtgCt4646AY.30.000458
ORF3a50V50AgTtgCt2525A.50.048077
ORF3a50V50AgTtgCt1212A0.004644
ORF3a50V50AgTtgCt1010B0.001278
ORF3a50V50AgTtgCt66B.10.000055
ORF3a50V50AgTtgCt55AY.200.000194
ORF3a50V50AgTtgCt44AY.250.000024
ORF3a50V50AgTtgCt44AY.40.000006
ORF3a50V50AgTtgCt44B.1.10.000073
ORF3a50V50AgTtgCt44B.1.617.20.000015
ORF3a50V50AgTtgCt33A.290.015957
ORF3a50V50AgTtgCt33AY.4.20.000065
ORF3a50V50AgTtgCt22AU.20.004843
ORF3a50V50AgTtgCt22AY.1190.000071
ORF3a50V50AgTTgCG12AY.440.000006
ORF3a50V50AgTtgCt12AY.440.000006
ORF3a50V50AgTtgCt22B.1.20.000018
ORF3a50V50AgTtgCt22B.1.3670.001585
ORF3a50V50AgTtgCt22B.400.000729
ORF3a50V50AgTtgCt11A.10.000282
ORF3a50V50AgTtgCt11A.20.000662
ORF3a50V50AgTtgCt11AY.1020.000027
ORF3a50V50AgTtgCt11AY.1030.000006
ORF3a50V50AgTtgCt11AY.1170.000085
ORF3a50V50AgTtgCt11AY.290.000016
ORF3a50V50AgTtgCt11AY.340.000097
ORF3a50V50AgTtgCt11AY.46.20.000635
ORF3a50V50AgTtgCt11AY.46.40.000165
ORF3a50V50AgTtgCt11AY.50.000021
ORF3a50V50AgTtgCt11AY.670.000464
ORF3a50V50AgTtgCt11AY.9.10.000084
ORF3a50V50AgTtgCt11AY.9.20.000037
ORF3a50V50AgTtgCt11B.1.1.3890.006061
ORF3a50V50AgTtgCt11B.1.160.330.004425
ORF3a50V50AgTtgCt11B.1.177.40.000211
ORF3a50V50AgTtgCt11B.1.177.70.000165
ORF3a50V50AgTtgCt11B.1.2210.000071
ORF3a50V50AgTtgCt11B.1.2340.000132
ORF3a50V50AgTtgCt11B.1.3510.00003
ORF3a50V50AgTtgCt11B.1.360.000146
ORF3a50V50AgTtgCt11B.1.4290.000024
ORF3a50V50AgTtgCt11B.1.5260.000024
ORF3a50V50AgTtgCt11B.550.00295
ORF3a50V50AgTtgCt11P.10.000016
ORF3a50V50AgTtgCt11P.1.120.000484
ORF3a50V50AgTtgCt11Z.10.00289