CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF3a : Mut = V259del1

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF3a259V259del1delGta-ta135913470.9911726167-26169
ORF3a259V259del1delgtAgt-135970.0051508526167-26169
ORF3a259V259del1delGtA-tN135940.0029433426167-26169
ORF3a259V259del1delGTA-NN135910.00073583526167-26169

Details of the mutation V259del1 within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF3a259V259del1Gta-ta13471359All0.000258
ORF3a259V259del1gtAgt-71359All0.000001
ORF3a259V259del1GtA-tN41359All0.000001
ORF3a259V259del1GTA-NN11359All0
ORF3a259V259del1Gta-ta513513A.270.849338
ORF3a259V259del1Gta-ta226226AY.40.000352
ORF3a259V259del1Gta-ta121122B.1.1.70.000108
ORF3a259V259del1gtAgt-1122B.1.1.70.000001
ORF3a259V259del1Gta-ta7680AY.4.20.001648
ORF3a259V259del1GtA-tN380AY.4.20.000065
ORF3a259V259del1GTA-NN180AY.4.20.000022
ORF3a259V259del1Gta-ta3535AY.430.000155
ORF3a259V259del1Gta-ta3435B.1.617.20.000128
ORF3a259V259del1GtA-tN135B.1.617.20.000004
ORF3a259V259del1Gta-ta3132B.1.20.000273
ORF3a259V259del1gtAgt-132B.1.20.000009
ORF3a259V259del1Gta-ta2929AY.750.001625
ORF3a259V259del1Gta-ta2323AY.1030.000143
ORF3a259V259del1Gta-ta2121AY.250.000126
ORF3a259V259del1Gta-ta2121AY.30.000209
ORF3a259V259del1Gta-ta1515AY.39.10.000594
ORF3a259V259del1Gta-ta1414AY.440.000085
ORF3a259V259del1Gta-ta1313AY.290.000205
ORF3a259V259del1Gta-ta1212B.10.00011
ORF3a259V259del1Gta-ta99A0.003483
ORF3a259V259del1Gta-ta88B.1.177.210.000612
ORF3a259V259del1Gta-ta77AY.420.000282
ORF3a259V259del1Gta-ta77AY.50.000145
ORF3a259V259del1Gta-ta77B.1.2210.000497
ORF3a259V259del1Gta-ta77B.1.4290.000165
ORF3a259V259del1Gta-ta66AY.1130.000854
ORF3a259V259del1Gta-ta66B0.000767
ORF3a259V259del1Gta-ta66B.1.1.3720.004132
ORF3a259V259del1Gta-ta55AY.46.40.000823
ORF3a259V259del1Gta-ta55AY.980.000395
ORF3a259V259del1Gta-ta55AY.99.20.000461
ORF3a259V259del1Gta-ta55B.1.1770.000066
ORF3a259V259del1Gta-ta55B.1.5260.000118
ORF3a259V259del1Gta-ta55P.20.000933
ORF3a259V259del1Gta-ta44AY.90.00027
ORF3a259V259del1Gta-ta33A.290.015957
ORF3a259V259del1Gta-ta33AY.1020.00008
ORF3a259V259del1Gta-ta33AY.1180.000188
ORF3a259V259del1Gta-ta33AY.390.000074
ORF3a259V259del1gtAgt-33B.1.6210.000266
ORF3a259V259del1Gta-ta33P.10.000047
ORF3a259V259del1Gta-ta22AY.1000.000092
ORF3a259V259del1Gta-ta22AY.3.10.000171
ORF3a259V259del1Gta-ta22AY.470.000062
ORF3a259V259del1Gta-ta22AY.5.30.000675
ORF3a259V259del1Gta-ta22AY.60.000082
ORF3a259V259del1Gta-ta22AY.9.20.000073
ORF3a259V259del1Gta-ta22AY.970.003401
ORF3a259V259del1Gta-ta22B.1.1.2300.018349
ORF3a259V259del1Gta-ta22B.1.1600.000062
ORF3a259V259del1Gta-ta22B.1.160.160.001859
ORF3a259V259del1Gta-ta22B.1.6370.000146
ORF3a259V259del1Gta-ta11A.10.000282
ORF3a259V259del1Gta-ta11A.20.000662
ORF3a259V259del1Gta-ta11A.210.00277
ORF3a259V259del1Gta-ta11AY.1190.000035
ORF3a259V259del1Gta-ta11AY.200.000039
ORF3a259V259del1Gta-ta11AY.340.000097
ORF3a259V259del1Gta-ta11AY.530.000288
ORF3a259V259del1Gta-ta11AY.540.000095
ORF3a259V259del1Gta-ta11AY.610.000105
ORF3a259V259del1Gta-ta11AY.70.000196
ORF3a259V259del1Gta-ta11AY.870.000833
ORF3a259V259del1Gta-ta11B.1.10.000018
ORF3a259V259del1Gta-ta11B.1.1.10.000327
ORF3a259V259del1Gta-ta11B.1.1.2140.000055
ORF3a259V259del1Gta-ta11B.1.1.3510.002793
ORF3a259V259del1Gta-ta11B.1.1.5190.00004
ORF3a259V259del1Gta-ta11B.1.1.630.000386
ORF3a259V259del1Gta-ta11B.1.160.330.004425
ORF3a259V259del1Gta-ta11B.1.177.70.000165
ORF3a259V259del1Gta-ta11B.1.177.860.000183
ORF3a259V259del1Gta-ta11B.1.221.40.004167
ORF3a259V259del1gtAgt-11B.1.36.100.004785
ORF3a259V259del1gtAgt-11B.1.36.290.000517
ORF3a259V259del1Gta-ta11B.1.3890.001002
ORF3a259V259del1Gta-ta11B.1.466.20.000391
ORF3a259V259del1Gta-ta11B.1.4700.001404
ORF3a259V259del1Gta-ta11B.1.5610.000397
ORF3a259V259del1Gta-ta11B.1.5770.000687
ORF3a259V259del1Gta-ta11Q.30.000145
ORF3a259V259del1Gta-ta11Q.80.000165
ORF3a259V259del1Gta-ta11R.10.00009