CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF3a : Mut = T24T

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF3a24T24TsynacTacC3292380.72340425462-25464
ORF3a24T24TsynacTacA329490.14893625462-25464
ORF3a24T24TsynacTacG329420.1276625462-25464

Details of the mutation T24T within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF3a24T24TacTacC238329All0.000046
ORF3a24T24TacTacA49329All0.000009
ORF3a24T24TacTacG42329All0.000008
ORF3a24T24TacTacC4951AY.440.000298
ORF3a24T24TacTacG251AY.440.000012
ORF3a24T24TacTacC3046B.1.617.20.000113
ORF3a24T24TacTacG1446B.1.617.20.000053
ORF3a24T24TacTacA246B.1.617.20.000008
ORF3a24T24TacTacA1221AY.40.000019
ORF3a24T24TacTacC921AY.40.000014
ORF3a24T24TacTacA1018AY.430.000044
ORF3a24T24TacTacC418AY.430.000018
ORF3a24T24TacTacG418AY.430.000018
ORF3a24T24TacTacC1717AY.450.002069
ORF3a24T24TacTacC1414AY.250.000084
ORF3a24T24TacTacC1014B.1.1.70.000009
ORF3a24T24TacTacG214B.1.1.70.000002
ORF3a24T24TacTacA214B.1.1.70.000002
ORF3a24T24TacTacC1313B.1.5260.000306
ORF3a24T24TacTacC1212AY.46.40.001974
ORF3a24T24TacTacG1111AY.1000.000506
ORF3a24T24TacTacC910AY.260.000255
ORF3a24T24TacTacG110AY.260.000028
ORF3a24T24TacTacA78AY.4.50.000752
ORF3a24T24TacTacC18AY.4.50.000107
ORF3a24T24TacTacA67AY.30.00006
ORF3a24T24TacTacC17AY.30.00001
ORF3a24T24TacTacC55AY.1020.000133
ORF3a24T24TacTacC55AY.390.000124
ORF3a24T24TacTacC35C.370.000348
ORF3a24T24TacTacA25C.370.000232
ORF3a24T24TacTacC33AY.1190.000106
ORF3a24T24TacTacC23AY.1200.000074
ORF3a24T24TacTacA13AY.1200.000037
ORF3a24T24TacTacC33AY.290.000047
ORF3a24T24TacTacC33AY.39.10.000119
ORF3a24T24TacTacG33AY.660.003209
ORF3a24T24TacTacA23AY.90.000135
ORF3a24T24TacTacC13AY.90.000068
ORF3a24T24TacTacC33B.10.000027
ORF3a24T24TacTacC33B.1.1770.00004
ORF3a24T24TacTacC22AY.1180.000125
ORF3a24T24TacTacC22AY.470.000062
ORF3a24T24TacTacC22AY.540.000191
ORF3a24T24TacTacC22AY.98.10.000097
ORF3a24T24TacTacG12AY.99.20.000092
ORF3a24T24TacTacC12AY.99.20.000092
ORF3a24T24TacTacC22B.1.10.000036
ORF3a24T24TacTacC22B.1.20.000018
ORF3a24T24TacTacC22B.1.2580.000133
ORF3a24T24TacTacA12B.1.3510.00003
ORF3a24T24TacTacC12B.1.3510.00003
ORF3a24T24TacTacC22B.1.617.10.000258
ORF3a24T24TacTacC22P.1.70.000639
ORF3a24T24TacTacC11AY.1030.000006
ORF3a24T24TacTacG11AY.120.000316
ORF3a24T24TacTacG11AY.230.00007
ORF3a24T24TacTacC11AY.270.000065
ORF3a24T24TacTacC11AY.320.000532
ORF3a24T24TacTacG11AY.4.2.10.000149
ORF3a24T24TacTacC11AY.420.00004
ORF3a24T24TacTacC11AY.460.000104
ORF3a24T24TacTacA11AY.80.000606
ORF3a24T24TacTacA11AY.870.000833
ORF3a24T24TacTacC11AY.940.000443
ORF3a24T24TacTacA11B.1.1.1390.022727
ORF3a24T24TacTacC11B.1.1.2140.000055
ORF3a24T24TacTacC11B.1.1.2200.001859
ORF3a24T24TacTacC11B.1.1.5190.00004
ORF3a24T24TacTacC11B.1.1.5240.020833
ORF3a24T24TacTacC11B.1.177.570.000281
ORF3a24T24TacTacC11B.1.177.600.000218
ORF3a24T24TacTacC11B.1.214.20.0006
ORF3a24T24TacTacA11B.1.2210.000071
ORF3a24T24TacTacC11B.1.2360.002053
ORF3a24T24TacTacC11B.1.5250.000113
ORF3a24T24TacTacG11B.1.5380.008065
ORF3a24T24TacTacC11B.1.5950.000261
ORF3a24T24TacTacC11C.36.30.000567
ORF3a24T24TacTacC11P.1.140.000048