CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF3a : Mut = T24S

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF3a24T24SnonsynaCtaGt95500.52631625462-25464
ORF3a24T24SnonsynActTct95450.47368425462-25464

Details of the mutation T24S within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF3a24T24SaCtaGt5095All0.00001
ORF3a24T24SActTct4595All0.000009
ORF3a24T24SaCtaGt3737AY.40.000058
ORF3a24T24SActTct2525AY.380.012481
ORF3a24T24SActTct1010B.1.5260.000235
ORF3a24T24SActTct44AY.1200.000149
ORF3a24T24SaCtaGt44B.1.1.70.000004
ORF3a24T24SActTct23AY.430.000009
ORF3a24T24SaCtaGt13AY.430.000004
ORF3a24T24SaCtaGt22AY.250.000012
ORF3a24T24SActTct22B.1.617.20.000008
ORF3a24T24SaCtaGt11AY.1140.000231
ORF3a24T24SaCtaGt11AY.340.000097
ORF3a24T24SActTct11AY.440.000006
ORF3a24T24SaCtaGt11AY.50.000021
ORF3a24T24SaCtaGt11AY.680.000274
ORF3a24T24SaCtaGt11AY.9.20.000037
ORF3a24T24SaCtaGt11B.10.000009
ORF3a24T24SActTct11B.1.258.30.001675