CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF3a : Mut = T12del2

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF3a12T12del2delaCTa--320.66666725426-25428
ORF3a12T12del2delACt--t310.33333325426-25428

Details of the mutation T12del2 within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF3a12T12del2aCTa--23All0
ORF3a12T12del2ACt--t13All0
ORF3a12T12del2aCTa--22B.1.1.70.000002
ORF3a12T12del2ACt--t11AY.40.000002