CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF3a : Mut = T12T

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF3a12T12TsynacTacC1811340.74033125426-25428
ORF3a12T12TsynacTacA181400.22099425426-25428
ORF3a12T12TsynacTacG18170.03867425426-25428

Details of the mutation T12T within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF3a12T12TacTacC134181All0.000026
ORF3a12T12TacTacA40181All0.000008
ORF3a12T12TacTacG7181All0.000001
ORF3a12T12TacTacC3639B.1.1.70.000032
ORF3a12T12TacTacA239B.1.1.70.000002
ORF3a12T12TacTacG139B.1.1.70.000001
ORF3a12T12TacTacC3434AY.510.030909
ORF3a12T12TacTacA3232B.1.1.2140.001775
ORF3a12T12TacTacC1313AY.440.000079
ORF3a12T12TacTacC56B.10.000046
ORF3a12T12TacTacG16B.10.000009
ORF3a12T12TacTacC55AY.1030.000031
ORF3a12T12TacTacC55AY.470.000156
ORF3a12T12TacTacC44B.1.2580.000266
ORF3a12T12TacTacC44B.1.617.20.000015
ORF3a12T12TacTacC33AY.1180.000188
ORF3a12T12TacTacA23P.10.000032
ORF3a12T12TacTacC13P.10.000016
ORF3a12T12TacTacG220.111111
ORF3a12T12TacTacC22AY.40.000003
ORF3a12T12TacTacC22AY.4.40.000818
ORF3a12T12TacTacC22AY.430.000009
ORF3a12T12TacTacC22AY.46.30.001867
ORF3a12T12TacTacC22B.1.2210.000142
ORF3a12T12TacTacC22B.1.6210.000177
ORF3a12T12TacTacA11AY.1110.000183
ORF3a12T12TacTacC11AY.1130.000142
ORF3a12T12TacTacC11AY.250.000006
ORF3a12T12TacTacG11AY.340.000097
ORF3a12T12TacTacC11AY.540.000095
ORF3a12T12TacTacC11AY.610.000105
ORF3a12T12TacTacA11AY.940.000443
ORF3a12T12TacTacC11B.1.1.1760.000439
ORF3a12T12TacTacG11B.1.1.330.000421
ORF3a12T12TacTacC11B.1.1770.000013
ORF3a12T12TacTacC11B.1.177.100.000878
ORF3a12T12TacTacC11B.1.177.80.000752
ORF3a12T12TacTacC11B.1.177.810.000189
ORF3a12T12TacTacC11B.1.177.860.000183
ORF3a12T12TacTacA11B.1.20.000009
ORF3a12T12TacTacC11B.1.3510.00003
ORF3a12T12TacTacG11B.1.416.10.001563
ORF3a12T12TacTacC11B.1.5160.001957
ORF3a12T12TacTacA11B.1.5870.001898