CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF3a : Mut = T12S

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF3a12T12SnonsynaCtaGt58540.93103525426-25428
ORF3a12T12SnonsynActTct5840.068965525426-25428

Details of the mutation T12S within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF3a12T12SaCtaGt5458All0.00001
ORF3a12T12SActTct458All0.000001
ORF3a12T12SaCtaGt2525B.1.2580.001664
ORF3a12T12SaCtaGt55B.1.20.000044
ORF3a12T12SaCtaGt34B.1.1.70.000003
ORF3a12T12SActTct14B.1.1.70.000001
ORF3a12T12SaCtaGt33AY.200.000117
ORF3a12T12SaCtaGt33AY.250.000018
ORF3a12T12SaCtaGt22AY.260.000057
ORF3a12T12SaCtaGt22AY.610.00021
ORF3a12T12SaCtaGt22AY.75.10.000361
ORF3a12T12SaCtaGt22B.1.617.20.000008
ORF3a12T12SaCtaGt11AY.160.00038
ORF3a12T12SActTct11AY.300.000396
ORF3a12T12SActTct11AY.430.000004
ORF3a12T12SaCtaGt11AY.470.000031
ORF3a12T12SaCtaGt11B.10.000009
ORF3a12T12SaCtaGt11B.1.10.000018
ORF3a12T12SaCtaGt11B.1.1.2940.001266
ORF3a12T12SaCtaGt11B.1.177.810.000189
ORF3a12T12SaCtaGt11B.1.5610.000397
ORF3a12T12SActTct11P.1.140.000048