CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF3a : Mut = T12A

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF3a12T12AnonsynActGct150150125426-25428

Details of the mutation T12A within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF3a12T12AActGct150150All0.000029
ORF3a12T12AActGct5353AY.30.000527
ORF3a12T12AActGct1616AY.3.10.001364
ORF3a12T12AActGct1616B.1.1.70.000014
ORF3a12T12AActGct99P.10.000142
ORF3a12T12AActGct55AY.440.00003
ORF3a12T12AActGct44P.20.000747
ORF3a12T12AActGct33AY.250.000018
ORF3a12T12AActGct33AY.260.000085
ORF3a12T12AActGct33AY.420.000121
ORF3a12T12AActGct33B.10.000027
ORF3a12T12AActGct33B.1.177.350.002073
ORF3a12T12AActGct33B.1.617.10.000387
ORF3a12T12AActGct22AY.230.000139
ORF3a12T12AActGct22AY.50.000041
ORF3a12T12AActGct22B.1.36.10.002281
ORF3a12T12AActGct22B.1.4290.000047
ORF3a12T12AActGct22B.1.5260.000047
ORF3a12T12AActGct22B.1.617.20.000008
ORF3a12T12AActGct11AY.1030.000006
ORF3a12T12AActGct11AY.1130.000142
ORF3a12T12AActGct11AY.1170.000085
ORF3a12T12AActGct11AY.1190.000035
ORF3a12T12AActGct11AY.330.000067
ORF3a12T12AActGct11AY.360.000148
ORF3a12T12AActGct11AY.370.000316
ORF3a12T12AActGct11AY.40.000002
ORF3a12T12AActGct11AY.60.000041
ORF3a12T12AActGct11AY.610.000105
ORF3a12T12AActGct11AY.75.10.00018
ORF3a12T12AActGct11AY.780.001541
ORF3a12T12AActGct11AY.9.20.000037
ORF3a12T12AActGct11B.1.1.4640.001473
ORF3a12T12AActGct11B.1.1600.000031
ORF3a12T12AActGct11B.1.20.000009
ORF3a12T12AActGct11B.600.015873