CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF3a : Mut = S74T

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF3a74S74TnonsynTccAcc25210.8425612-25614
ORF3a74S74TnonsynTcCAcG2520.0825612-25614
ORF3a74S74TnonsynTcCAcA2510.0425612-25614
ORF3a74S74TnonsynTcCAcT2510.0425612-25614

Details of the mutation S74T within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF3a74S74TTccAcc2125All0.000004
ORF3a74S74TTcCAcG225All0
ORF3a74S74TTcCAcT125All0
ORF3a74S74TTcCAcA125All0
ORF3a74S74TTccAcc590.277778
ORF3a74S74TTcCAcG290.111111
ORF3a74S74TTcCAcT190.055556
ORF3a74S74TTcCAcA190.055556
ORF3a74S74TTccAcc33B.1.3510.000089
ORF3a74S74TTccAcc22AY.440.000012
ORF3a74S74TTccAcc22AY.470.000062
ORF3a74S74TTccAcc22B.10.000018
ORF3a74S74TTccAcc11AY.40.000002
ORF3a74S74TTccAcc11AY.430.000004
ORF3a74S74TTccAcc11AY.870.000833
ORF3a74S74TTccAcc11B.1.10.000018
ORF3a74S74TTccAcc11B.1.1.2140.000055
ORF3a74S74TTccAcc11B.1.2210.000071
ORF3a74S74TTccAcc11B.1.617.20.000004