CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF3a : Mut = S60P

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF3a60S60PnonsynTccCcc7327210.98497325570-25572
ORF3a60S60PnonsynTcCCcA73290.012295125570-25572
ORF3a60S60PnonsynTcCCcG73210.0013661225570-25572
ORF3a60S60PnonsynTcCCcT73210.0013661225570-25572

Details of the mutation S60P within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF3a60S60PTccCcc721732All0.000138
ORF3a60S60PTcCCcA9732All0.000002
ORF3a60S60PTcCCcG1732All0
ORF3a60S60PTcCCcT1732All0
ORF3a60S60PTccCcc145152B.1.1.70.00013
ORF3a60S60PTcCCcA7152B.1.1.70.000006
ORF3a60S60PTccCcc112112B.1.617.20.000422
ORF3a60S60PTccCcc110110AY.1020.002917
ORF3a60S60PTccCcc6868AY.1200.002528
ORF3a60S60PTccCcc3232P.10.000504
ORF3a60S60PTccCcc2727B.1.4060.163636
ORF3a60S60PTccCcc2020B.1.1770.000263
ORF3a60S60PTccCcc1717AY.440.000103
ORF3a60S60PTccCcc1414B.1.20.000123
ORF3a60S60PTccCcc1212AY.390.000297
ORF3a60S60PTccCcc1212B.1.36.390.026608
ORF3a60S60PTccCcc1111B.1.1.5190.000437
ORF3a60S60PTccCcc1010AY.330.000668
ORF3a60S60PTccCcc1010AY.430.000044
ORF3a60S60PTccCcc99AY.30.00009
ORF3a60S60PTccCcc99AY.40.000014
ORF3a60S60PTccCcc99B.1.2400.00194
ORF3a60S60PTccCcc88AY.39.10.000317
ORF3a60S60PTccCcc88B.10.000073
ORF3a60S60PTccCcc66AY.1190.000212
ORF3a60S60PTccCcc66AY.950.004566
ORF3a60S60PTccCcc66C.370.000696
ORF3a60S60PTccCcc55B.1.6280.001762
ORF3a60S60PTccCcc44B.1.5960.000349
ORF3a60S60PTccCcc33AY.460.000312
ORF3a60S60PTccCcc33AY.480.001395
ORF3a60S60PTccCcc33P.1.140.000143
ORF3a60S60PTcCCcA220.111111
ORF3a60S60PTccCcc22AY.250.000012
ORF3a60S60PTccCcc22AY.4.30.001684
ORF3a60S60PTccCcc22AY.450.000243
ORF3a60S60PTcCCcG12AY.990.001049
ORF3a60S60PTcCCcT12AY.990.001049
ORF3a60S60PTccCcc22R.10.00018
ORF3a60S60PTccCcc11AY.1030.000006
ORF3a60S60PTccCcc11AY.1050.000643
ORF3a60S60PTccCcc11AY.1160.000287
ORF3a60S60PTccCcc11AY.1170.000085
ORF3a60S60PTccCcc11AY.200.000039
ORF3a60S60PTccCcc11AY.260.000028
ORF3a60S60PTccCcc11AY.290.000016
ORF3a60S60PTccCcc11AY.34.10.00051
ORF3a60S60PTccCcc11AY.360.000148
ORF3a60S60PTccCcc11AY.46.60.000072
ORF3a60S60PTccCcc11AY.470.000031
ORF3a60S60PTccCcc11AY.5.40.000277
ORF3a60S60PTccCcc11AY.580.000907
ORF3a60S60PTccCcc11AY.60.000041
ORF3a60S60PTccCcc11AY.880.000884
ORF3a60S60PTccCcc11AY.9.20.000037
ORF3a60S60PTccCcc11B.1.10.000018
ORF3a60S60PTccCcc11B.1.1.2220.000204
ORF3a60S60PTccCcc11B.1.1.3010.001179
ORF3a60S60PTccCcc11B.1.1110.001175
ORF3a60S60PTccCcc11B.1.1600.000031
ORF3a60S60PTccCcc11B.1.177.230.003236
ORF3a60S60PTccCcc11B.1.177.240.001295
ORF3a60S60PTccCcc11B.1.177.560.000668
ORF3a60S60PTccCcc11B.1.177.600.000218
ORF3a60S60PTccCcc11B.1.1820.007246
ORF3a60S60PTccCcc11B.1.2580.000067
ORF3a60S60PTccCcc11B.1.258.100.011364
ORF3a60S60PTccCcc11B.1.3510.00003
ORF3a60S60PTccCcc11B.1.351.30.000876
ORF3a60S60PTccCcc11B.1.4290.000024
ORF3a60S60PTccCcc11B.1.5250.000113
ORF3a60S60PTccCcc11B.1.5260.000024
ORF3a60S60PTccCcc11B.1.621.10.000506