CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF3a : Mut = S60L

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF3a60S60LnonsynTCcCTc1190.81818225570-25572
ORF3a60S60LnonsyntCCtTA1110.090909125570-25572
ORF3a60S60LnonsynTCCCTG1110.090909125570-25572

Details of the mutation S60L within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF3a60S60LTCcCTc911All0.000002
ORF3a60S60LtCCtTA111All0
ORF3a60S60LTCCCTG111All0
ORF3a60S60LTCcCTc77B.1.1.70.000006
ORF3a60S60LtCCtTA11AY.610.000105
ORF3a60S60LTCCCTG11B.1.1.1390.022727
ORF3a60S60LTCcCTc11B.1.360.000146
ORF3a60S60LTCcCTc11Q.80.000165