CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF3a : Mut = S60C

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF3a60S60CnonsyntCctGc51500.98039225570-25572
ORF3a60S60CnonsyntCCtGT5110.019607825570-25572

Details of the mutation S60C within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF3a60S60CtCctGc5051All0.00001
ORF3a60S60CtCCtGT151All0
ORF3a60S60CtCctGc2222B.1.177.410.055
ORF3a60S60CtCctGc1616B.1.1.70.000014
ORF3a60S60CtCctGc33B.1.1770.00004
ORF3a60S60CtCctGc22B.1.177.770.001452
ORF3a60S60CtCctGc110.055556
ORF3a60S60CtCctGc11A0.000387
ORF3a60S60CtCctGc11AY.1030.000006
ORF3a60S60CtCctGc11AY.250.000006
ORF3a60S60CtCCtGT11AY.990.001049
ORF3a60S60CtCctGc11B.1.177.200.001517
ORF3a60S60CtCctGc11B.1.20.000009
ORF3a60S60CtCctGc11B.1.6370.000073