CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF3a : Mut = S26del2

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF3a26S26del2delTCa--a750.71428625468-25470
ORF3a26S26del2deltCAt--720.28571425468-25470

Details of the mutation S26del2 within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF3a26S26del2TCa--a57All0.000001
ORF3a26S26del2tCAt--27All0
ORF3a26S26del2TCa--a11AY.1030.000006
ORF3a26S26del2tCAt--11AY.230.00007
ORF3a26S26del2TCa--a11AY.440.000006
ORF3a26S26del2tCAt--11AY.490.003195
ORF3a26S26del2TCa--a11AY.990.001049
ORF3a26S26del2TCa--a11B.1.1.70.000001
ORF3a26S26del2TCa--a11B.1.1770.000013