CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF3a : Mut = S216L

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF3a216S216LnonsyntCatTa138913870.9985626038-26040
ORF3a216S216LnonsynTCaCTa138910.00071994226038-26040
ORF3a216S216LnonsynTCACTC138910.00071994226038-26040

Details of the mutation S216L within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF3a216S216LtCatTa13871389All0.000265
ORF3a216S216LTCACTC11389All0
ORF3a216S216LTCaCTa11389All0
ORF3a216S216LtCatTa402402B.1.617.20.001514
ORF3a216S216LtCatTa209209P.1.81
ORF3a216S216LtCatTa198200AY.430.000877
ORF3a216S216LTCaCTa1200AY.430.000004
ORF3a216S216LTCACTC1200AY.430.000004
ORF3a216S216LtCatTa186186B.10.001704
ORF3a216S216LtCatTa166166P.10.002615
ORF3a216S216LtCatTa4747B.1.1.70.000042
ORF3a216S216LtCatTa3333AY.40.000051
ORF3a216S216LtCatTa2929C.1.20.123404
ORF3a216S216LtCatTa2323AY.1020.00061
ORF3a216S216LtCatTa1212AY.30.000119
ORF3a216S216LtCatTa99AY.1030.000056
ORF3a216S216LtCatTa88B.1.1770.000105
ORF3a216S216LtCatTa77AY.46.60.000505
ORF3a216S216LtCatTa77B.1.1.630.002701
ORF3a216S216LtCatTa66AY.440.000037
ORF3a216S216LtCatTa44AY.230.000279
ORF3a216S216LtCatTa44B.1.10.000073
ORF3a216S216LtCatTa33AY.250.000018
ORF3a216S216LtCatTa33AY.460.000312
ORF3a216S216LtCatTa33B.1.2210.000213
ORF3a216S216LtCatTa22B.1.177.70.00033
ORF3a216S216LtCatTa22B.1.617.10.000258
ORF3a216S216LtCatTa22C.36.3.10.005435
ORF3a216S216LtCatTa22C.370.000232
ORF3a216S216LtCatTa11AY.16.10.00047
ORF3a216S216LtCatTa11AY.29.10.000221
ORF3a216S216LtCatTa11AY.34.10.00051
ORF3a216S216LtCatTa11AY.390.000025
ORF3a216S216LtCatTa11AY.420.00004
ORF3a216S216LtCatTa11AY.590.00053
ORF3a216S216LtCatTa11AY.990.001049
ORF3a216S216LtCatTa11B0.000128
ORF3a216S216LtCatTa11B.1.1.2160.00089
ORF3a216S216LtCatTa11B.1.1.4200.001006
ORF3a216S216LtCatTa11B.1.1.50.008333
ORF3a216S216LtCatTa11B.1.2390.001221
ORF3a216S216LtCatTa11B.1.3770.004566
ORF3a216S216LtCatTa11B.1.466.20.000391
ORF3a216S216LtCatTa11C.10.002392
ORF3a216S216LtCatTa11P.1.10.000318
ORF3a216S216LtCatTa11P.1.130.000898
ORF3a216S216LtCatTa11P.1.160.000374
ORF3a216S216LtCatTa11P.1.70.000319
ORF3a216S216LtCatTa11Q.10.000126