CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF3a : Mut = S209T

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF3a209S209TnonsynTcaAca19180.94736826017-26019
ORF3a209S209TnonsynTcAAcG1910.052631626017-26019

Details of the mutation S209T within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF3a209S209TTcaAca1819All0.000003
ORF3a209S209TTcAAcG119All0
ORF3a209S209TTcaAca33B.1.177.70.000495
ORF3a209S209TTcaAca33B.1.20.000026
ORF3a209S209TTcaAca22AY.200.000078
ORF3a209S209TTcAAcG12AY.430.000004
ORF3a209S209TTcaAca12AY.430.000004
ORF3a209S209TTcaAca11A0.000387
ORF3a209S209TTcaAca11AY.40.000002
ORF3a209S209TTcaAca11B.1.10.000018
ORF3a209S209TTcaAca11B.1.1.1940.00495
ORF3a209S209TTcaAca11B.1.1.3680.003086
ORF3a209S209TTcaAca11B.1.1.5230.001563
ORF3a209S209TTcaAca11B.1.2430.00007
ORF3a209S209TTcaAca11B.1.4290.000024
ORF3a209S209TTcaAca11B.1.617.20.000004