CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF3a : Mut = S209R

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF3a209S209RnonsynTCaCGa520.426017-26019
ORF3a209S209RnonsynTCaAGa510.226017-26019
ORF3a209S209RnonsynTCAAGG510.226017-26019
ORF3a209S209RnonsynTCACGG510.226017-26019

Details of the mutation S209R within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF3a209S209RTCaCGa25All0
ORF3a209S209RTCaAGa15All0
ORF3a209S209RTCAAGG15All0
ORF3a209S209RTCACGG15All0
ORF3a209S209RTCaCGa25AY.430.000009
ORF3a209S209RTCaAGa15AY.430.000004
ORF3a209S209RTCAAGG15AY.430.000004
ORF3a209S209RTCACGG15AY.430.000004