CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF3a : Mut = S209P

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF3a209S209PnonsynTcaCca67660.98507526017-26019
ORF3a209S209PnonsynTcACcG6710.014925426017-26019

Details of the mutation S209P within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF3a209S209PTcaCca6667All0.000013
ORF3a209S209PTcACcG167All0
ORF3a209S209PTcaCca1212B.1.351.30.010517
ORF3a209S209PTcaCca99B.1.1.250.005117
ORF3a209S209PTcaCca99B.1.20.000079
ORF3a209S209PTcaCca66B.10.000055
ORF3a209S209PTcaCca55B.1.3510.000149
ORF3a209S209PTcaCca23AY.430.000009
ORF3a209S209PTcACcG13AY.430.000004
ORF3a209S209PTcaCca22B.1.2430.000139
ORF3a209S209PTcaCca22B.1.3690.00057
ORF3a209S209PTcaCca22B.1.617.20.000008
ORF3a209S209PTcaCca11A0.000387
ORF3a209S209PTcaCca11AY.1020.000027
ORF3a209S209PTcaCca11AY.230.00007
ORF3a209S209PTcaCca11B0.000128
ORF3a209S209PTcaCca11B.1.10.000018
ORF3a209S209PTcaCca11B.1.1.2690.001353
ORF3a209S209PTcaCca11B.1.1.70.000001
ORF3a209S209PTcaCca11B.1.1770.000013
ORF3a209S209PTcaCca11B.1.221.30.000833
ORF3a209S209PTcaCca11B.1.2320.000537
ORF3a209S209PTcaCca11B.1.2340.000132
ORF3a209S209PTcaCca11B.1.3130.006579
ORF3a209S209PTcaCca11B.1.351.20.000303
ORF3a209S209PTcaCca11B.1.4290.000024
ORF3a209S209PTcaCca11B.1.5610.000397
ORF3a209S209PTcaCca11B.1.6200.000946
ORF3a209S209PTcaCca11Q.10.000126