CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF3a : Mut = S180Y

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF3a180S180YnonsyntCttAt4304210.9790725930-25932
ORF3a180S180YnonsyntCTtAC43090.020930225930-25932

Details of the mutation S180Y within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF3a180S180YtCttAt421430All0.000081
ORF3a180S180YtCTtAC9430All0.000002
ORF3a180S180YtCttAt175175B.1.1.70.000157
ORF3a180S180YtCttAt5455AY.430.000239
ORF3a180S180YtCTtAC155AY.430.000004
ORF3a180S180YtCttAt4545AY.440.000274
ORF3a180S180YtCttAt2929AY.260.000821
ORF3a180S180YtCttAt1414B.1.20.000123
ORF3a180S180YtCttAt810B.1.617.20.00003
ORF3a180S180YtCTtAC210B.1.617.20.000008
ORF3a180S180YtCttAt99AY.740.001041
ORF3a180S180YtCttAt88AY.200.000311
ORF3a180S180YtCttAt88AY.40.000012
ORF3a180S180YtCttAt88B.1.1.5190.000318
ORF3a180S180YtCttAt77B.1.3110.001922
ORF3a180S180YtCTtAC66P.10.000095
ORF3a180S180YtCttAt44AY.1000.000184
ORF3a180S180YtCttAt44AY.50.000083
ORF3a180S180YtCttAt44B.10.000037
ORF3a180S180YtCttAt33AY.1030.000019
ORF3a180S180YtCttAt33AY.1100.000338
ORF3a180S180YtCttAt33AY.230.000209
ORF3a180S180YtCttAt22AY.330.000134
ORF3a180S180YtCttAt22AY.370.000632
ORF3a180S180YtCttAt22AY.540.000191
ORF3a180S180YtCttAt22B.1.1.700.000682
ORF3a180S180YtCttAt22B.30.001661
ORF3a180S180YtCttAt11A.10.000282
ORF3a180S180YtCttAt11AY.1170.000085
ORF3a180S180YtCttAt11AY.120.000316
ORF3a180S180YtCttAt11AY.1200.000037
ORF3a180S180YtCttAt11AY.250.000006
ORF3a180S180YtCttAt11AY.290.000016
ORF3a180S180YtCttAt11AY.30.00001
ORF3a180S180YtCttAt11AY.9.20.000037
ORF3a180S180YtCttAt11B0.000128
ORF3a180S180YtCttAt11B.1.10.000018
ORF3a180S180YtCttAt11B.1.1.3110.000358
ORF3a180S180YtCttAt11B.1.1.370.000193
ORF3a180S180YtCttAt11B.1.1.4320.001266
ORF3a180S180YtCttAt11B.1.1770.000013
ORF3a180S180YtCttAt11B.1.177.40.000211
ORF3a180S180YtCttAt11B.1.177.80.000752
ORF3a180S180YtCttAt11B.1.2180.005155
ORF3a180S180YtCttAt11B.1.2430.00007
ORF3a180S180YtCttAt11B.1.3010.005917
ORF3a180S180YtCttAt11B.1.360.000146
ORF3a180S180YtCttAt11B.1.3960.000706
ORF3a180S180YtCttAt11B.1.4270.00005
ORF3a180S180YtCttAt11B.1.4970.000315
ORF3a180S180YtCttAt11B.1.5250.000113
ORF3a180S180YtCttAt11C.370.000116