CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF3a : Mut = S171T

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF3a171S171TnonsynTcaAca30290.96666725903-25905
ORF3a171S171TnonsynTcAAcG3010.033333325903-25905

Details of the mutation S171T within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF3a171S171TTcaAca2930All0.000006
ORF3a171S171TTcAAcG130All0
ORF3a171S171TTcaAca77AY.40.000011
ORF3a171S171TTcaAca77B.1.1.2140.000388
ORF3a171S171TTcaAca44AY.30.00004
ORF3a171S171TTcAAcG120.055556
ORF3a171S171TTcaAca120.055556
ORF3a171S171TTcaAca22B.1.1.70.000002
ORF3a171S171TTcaAca11AY.1030.000006
ORF3a171S171TTcaAca11AY.200.000039
ORF3a171S171TTcaAca11AY.29.10.000221
ORF3a171S171TTcaAca11AY.430.000004
ORF3a171S171TTcaAca11B.1.10.000018
ORF3a171S171TTcaAca11B.1.177.40.000211
ORF3a171S171TTcaAca11B.1.20.000009
ORF3a171S171TTcaAca11B.6.60.000889