CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF3a : Mut = S166S

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF3a166S166SsyntcAtcG1991040.52261325888-25890
ORF3a166S166SsyntcAtcT199890.44723625888-25890
ORF3a166S166SsyntcAtcC19960.030150825888-25890

Details of the mutation S166S within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF3a166S166StcAtcG104199All0.00002
ORF3a166S166StcAtcT89199All0.000017
ORF3a166S166StcAtcC6199All0.000001
ORF3a166S166StcAtcG4790B.1.1.70.000042
ORF3a166S166StcAtcT4290B.1.1.70.000038
ORF3a166S166StcAtcC190B.1.1.70.000001
ORF3a166S166StcAtcT1919B.1.2650.024142
ORF3a166S166StcAtcG1212B.1.4290.000282
ORF3a166S166StcAtcT49AY.40.000006
ORF3a166S166StcAtcG39AY.40.000005
ORF3a166S166StcAtcC29AY.40.000003
ORF3a166S166StcAtcG88B.1.1.100.008919
ORF3a166S166StcAtcG78B.1.617.20.000026
ORF3a166S166StcAtcT18B.1.617.20.000004
ORF3a166S166StcAtcT66B.1.1.500.004073
ORF3a166S166StcAtcG44AY.1020.000106
ORF3a166S166StcAtcT34AY.430.000013
ORF3a166S166StcAtcG14AY.430.000004
ORF3a166S166StcAtcT24B.10.000018
ORF3a166S166StcAtcG14B.10.000009
ORF3a166S166StcAtcC14B.10.000009
ORF3a166S166StcAtcG44P.1.10.001271
ORF3a166S166StcAtcG33AY.46.50.000595
ORF3a166S166StcAtcT220.111111
ORF3a166S166StcAtcG22AY.1030.000012
ORF3a166S166StcAtcG22AY.30.00002
ORF3a166S166StcAtcG22AY.470.000062
ORF3a166S166StcAtcG22B.1.1.5190.000079
ORF3a166S166StcAtcT11AE.80.000489
ORF3a166S166StcAtcT11AY.1180.000063
ORF3a166S166StcAtcT11AY.250.000006
ORF3a166S166StcAtcG11AY.330.000067
ORF3a166S166StcAtcT11AY.420.00004
ORF3a166S166StcAtcT11AY.440.000006
ORF3a166S166StcAtcG11AY.7.10.000113
ORF3a166S166StcAtcT11AY.730.000665
ORF3a166S166StcAtcT11B.1.10.000018
ORF3a166S166StcAtcT11B.1.1.1700.001247
ORF3a166S166StcAtcC11B.1.1.1940.00495
ORF3a166S166StcAtcC11B.1.1.2840.000107
ORF3a166S166StcAtcG11B.1.1.3060.000438
ORF3a166S166StcAtcT11B.1.1.5070.008696
ORF3a166S166StcAtcG11B.1.1.830.00271
ORF3a166S166StcAtcG11B.1.160.80.001289
ORF3a166S166StcAtcG11B.1.20.000009
ORF3a166S166StcAtcT11P.10.000016