CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF3a : Mut = Q57R

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF3a57Q57RnonsyncAgcGg274925920.94288825561-25563
ORF3a57Q57RnonsyncAGcGT27491560.056747925561-25563
ORF3a57Q57RnonsynCAgAGg274910.00036376925561-25563

Details of the mutation Q57R within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF3a57Q57RcAgcGg25922749All0.000496
ORF3a57Q57RcAGcGT1562749All0.00003
ORF3a57Q57RCAgAGg12749All0
ORF3a57Q57RcAgcGg950950AY.510.863636
ORF3a57Q57RcAgcGg844846B.1.617.20.003178
ORF3a57Q57RcAGcGT2846B.1.617.20.000008
ORF3a57Q57RcAgcGg214215AY.40.000333
ORF3a57Q57RcAGcGT1215AY.40.000002
ORF3a57Q57RcAGcGT110191AY.190.125428
ORF3a57Q57RcAgcGg81191AY.190.09236
ORF3a57Q57RcAgcGg8787AY.170.713115
ORF3a57Q57RcAgcGg7373AY.16.10.034305
ORF3a57Q57RcAgcGg4242B.1.1.70.000038
ORF3a57Q57RcAgcGg4040AY.440.000243
ORF3a57Q57RcAgcGg3839AY.430.000168
ORF3a57Q57RCAgAGg139AY.430.000004
ORF3a57Q57RcAgcGg2020AY.750.00112
ORF3a57Q57RcAgcGg1616AY.9.20.000588
ORF3a57Q57RcAgcGg1014B.10.000092
ORF3a57Q57RcAGcGT414B.10.000037
ORF3a57Q57RcAgcGg1313AY.390.000321
ORF3a57Q57RcAgcGg1313AY.680.003559
ORF3a57Q57RcAgcGg1010AY.550.009174
ORF3a57Q57RcAGcGT1010B.1.20.000088
ORF3a57Q57RcAgcGg99AY.1020.000239
ORF3a57Q57RcAgcGg88AY.130.001288
ORF3a57Q57RcAgcGg88AY.370.002528
ORF3a57Q57RcAgcGg88AY.650.004264
ORF3a57Q57RcAgcGg88AY.9.10.00067
ORF3a57Q57RcAgcGg67AY.470.000187
ORF3a57Q57RcAGcGT17AY.470.000031
ORF3a57Q57RcAGcGT77B.1.3510.000208
ORF3a57Q57RcAgcGg56AY.450.000608
ORF3a57Q57RcAGcGT16AY.450.000122
ORF3a57Q57RcAGcGT66B.1.1600.000187
ORF3a57Q57RcAGcGT66B.1.400.117647
ORF3a57Q57RcAgcGg55AY.100.00265
ORF3a57Q57RcAgcGg45AY.520.003257
ORF3a57Q57RcAGcGT15AY.520.000814
ORF3a57Q57RcAgcGg55AY.670.002321
ORF3a57Q57RcAgcGg55AY.980.000395
ORF3a57Q57RcAgcGg44AY.1000.000184
ORF3a57Q57RcAgcGg33AY.230.000209
ORF3a57Q57RcAgcGg33AY.380.001498
ORF3a57Q57RcAgcGg33AY.400.002893
ORF3a57Q57RcAgcGg33AY.540.000286
ORF3a57Q57RcAgcGg33B.1.10.000054
ORF3a57Q57RcAgcGg22AY.1100.000225
ORF3a57Q57RcAgcGg22AY.1170.000169
ORF3a57Q57RcAgcGg12AY.1200.000037
ORF3a57Q57RcAGcGT12AY.1200.000037
ORF3a57Q57RcAgcGg22AY.250.000012
ORF3a57Q57RcAgcGg22AY.300.000791
ORF3a57Q57RcAgcGg22AY.420.00008
ORF3a57Q57RcAgcGg22AY.460.000208
ORF3a57Q57RcAgcGg22AY.490.00639
ORF3a57Q57RcAgcGg22AY.5.40.000553
ORF3a57Q57RcAgcGg22AY.730.001331
ORF3a57Q57RcAgcGg22AY.75.10.000361
ORF3a57Q57RcAgcGg22AY.98.10.000097
ORF3a57Q57RcAgcGg12B.1.1770.000013
ORF3a57Q57RcAGcGT12B.1.1770.000013
ORF3a57Q57RcAgcGg22P.1.130.001797
ORF3a57Q57RcAgcGg11AY.1010.00049
ORF3a57Q57RcAgcGg11AY.1030.000006
ORF3a57Q57RcAgcGg11AY.1210.000135
ORF3a57Q57RcAgcGg11AY.140.000088
ORF3a57Q57RcAgcGg11AY.160.00038
ORF3a57Q57RcAgcGg11AY.200.000039
ORF3a57Q57RcAgcGg11AY.240.000431
ORF3a57Q57RcAgcGg11AY.260.000028
ORF3a57Q57RcAgcGg11AY.30.00001
ORF3a57Q57RcAgcGg11AY.330.000067
ORF3a57Q57RcAgcGg11AY.4.50.000107
ORF3a57Q57RcAgcGg11AY.46.20.000635
ORF3a57Q57RcAgcGg11AY.46.60.000072
ORF3a57Q57RcAgcGg11AY.50.000021
ORF3a57Q57RcAgcGg11AY.590.00053
ORF3a57Q57RcAgcGg11AY.610.000105
ORF3a57Q57RcAgcGg11AY.7.10.000113
ORF3a57Q57RcAgcGg11AY.820.001357
ORF3a57Q57RcAgcGg11AY.910.00073
ORF3a57Q57RcAgcGg11AY.930.000273
ORF3a57Q57RcAgcGg11AY.99.10.001553
ORF3a57Q57RcAgcGg11B.1.1.2280.003049
ORF3a57Q57RcAGcGT11B.1.1.3720.000689
ORF3a57Q57RcAgcGg11B.1.177.730.000566
ORF3a57Q57RcAgcGg11B.1.2100.002132
ORF3a57Q57RcAgcGg11B.1.2210.000071
ORF3a57Q57RcAGcGT11B.1.3690.000285
ORF3a57Q57RcAGcGT11B.1.4290.000024
ORF3a57Q57RcAGcGT11B.1.4590.004082
ORF3a57Q57RcAGcGT11B.1.466.20.000391