CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF3a : Mut = Q57L

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF3a57Q57LnonsyncAGcTA6014190.69717125561-25563
ORF3a57Q57LnonsyncAgcTg6011120.18635625561-25563
ORF3a57Q57LnonsyncAGcTT601670.11148125561-25563
ORF3a57Q57LnonsynCAgTTg60130.0049916825561-25563

Details of the mutation Q57L within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF3a57Q57LcAGcTA419601All0.00008
ORF3a57Q57LcAgcTg112601All0.000021
ORF3a57Q57LcAGcTT67601All0.000013
ORF3a57Q57LCAgTTg3601All0.000001
ORF3a57Q57LcAGcTA113137AY.40.000176
ORF3a57Q57LcAgcTg24137AY.40.000037
ORF3a57Q57LcAGcTA8585AY.200.003304
ORF3a57Q57LcAGcTA8282AY.30.000816
ORF3a57Q57LcAGcTA7173AY.250.000427
ORF3a57Q57LcAgcTg273AY.250.000012
ORF3a57Q57LcAGcTT4444B.1.438.10.00472
ORF3a57Q57LcAgcTg2941B.1.1.70.000026
ORF3a57Q57LcAGcTA1241B.1.1.70.000011
ORF3a57Q57LcAGcTA2828B.1.2410.022727
ORF3a57Q57LcAgcTg2023AY.1030.000124
ORF3a57Q57LcAGcTA323AY.1030.000019
ORF3a57Q57LcAGcTT1112AY.750.000616
ORF3a57Q57LcAgcTg112AY.750.000056
ORF3a57Q57LcAgcTg1111P.1.70.003512
ORF3a57Q57LcAGcTA810B.1.20.00007
ORF3a57Q57LcAGcTT210B.1.20.000018
ORF3a57Q57LcAGcTT77B.1.4270.000353
ORF3a57Q57LcAgcTg34B.1.617.20.000011
ORF3a57Q57LcAGcTA14B.1.617.20.000004
ORF3a57Q57LcAgcTg230.111111
ORF3a57Q57LcAGcTT130.055556
ORF3a57Q57LcAGcTA33AY.290.000047
ORF3a57Q57LcAGcTA23AY.4.20.000043
ORF3a57Q57LCAgTTg13AY.4.20.000022
ORF3a57Q57LcAgcTg23AY.440.000012
ORF3a57Q57LcAGcTA13AY.440.000006
ORF3a57Q57LcAGcTA33AY.470.000093
ORF3a57Q57LcAgcTg22AY.1200.000074
ORF3a57Q57LcAgcTg22AY.4.50.000215
ORF3a57Q57LcAgcTg22AY.430.000009
ORF3a57Q57LcAGcTA12B0.000128
ORF3a57Q57LcAgcTg12B0.000128
ORF3a57Q57LcAGcTA22B.1.4480.005249
ORF3a57Q57LcAGcTT22B.1.5180.023529
ORF3a57Q57LcAgcTg22P.10.000032
ORF3a57Q57LCAgTTg11AY.1000.000046
ORF3a57Q57LcAGcTA11AY.1020.000027
ORF3a57Q57LcAGcTA11AY.390.000025
ORF3a57Q57LcAgcTg11AY.4.2.10.000149
ORF3a57Q57LcAGcTA11AY.420.00004
ORF3a57Q57LcAgcTg11AY.480.000465
ORF3a57Q57LcAgcTg11AY.60.000041
ORF3a57Q57LcAgcTg11AY.700.000209
ORF3a57Q57LcAgcTg11B.10.000009
ORF3a57Q57LcAgcTg11B.1.10.000018
ORF3a57Q57LcAGcTA11B.1.1.3060.000438
ORF3a57Q57LcAgcTg11B.1.1.700.000341
ORF3a57Q57LCAgTTg11B.1.1770.000013
ORF3a57Q57LcAgcTg11B.1.4000.000429
ORF3a57Q57LcAgcTg11C.360.000911