CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
ORF3a | 240 | P240S | nonsyn | Cct | Tct | 17374 | 17372 | 0.999885 | 26110-26112 | |
ORF3a | 240 | P240S | nonsyn | CcT | TcC | 17374 | 2 | 0.000115115 | 26110-26112 |
Details of the mutation P240S within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
ORF3a | 240 | P240S | Cct | Tct | 17372 | 17374 | All | 0.003323 |
ORF3a | 240 | P240S | CcT | TcC | 2 | 17374 | All | 0 |
ORF3a | 240 | P240S | Cct | Tct | 11525 | 11525 | B.1.1.7 | 0.010317 |
ORF3a | 240 | P240S | Cct | Tct | 669 | 669 | AY.3 | 0.006654 |
ORF3a | 240 | P240S | Cct | Tct | 516 | 516 | AY.4 | 0.000803 |
ORF3a | 240 | P240S | Cct | Tct | 426 | 426 | B.1 | 0.003902 |
ORF3a | 240 | P240S | Cct | Tct | 390 | 390 | B.1.240 | 0.08407 |
ORF3a | 240 | P240S | Cct | Tct | 313 | 313 | AY.119 | 0.011051 |
ORF3a | 240 | P240S | Cct | Tct | 258 | 258 | Q.8 | 0.042546 |
ORF3a | 240 | P240S | Cct | Tct | 246 | 246 | B.1.617.2 | 0.000926 |
ORF3a | 240 | P240S | Cct | Tct | 208 | 208 | AY.49 | 0.664537 |
ORF3a | 240 | P240S | Cct | Tct | 157 | 157 | AY.103 | 0.000975 |
ORF3a | 240 | P240S | Cct | Tct | 152 | 152 | P.1 | 0.002395 |
ORF3a | 240 | P240S | Cct | Tct | 147 | 148 | AY.25 | 0.000884 |
ORF3a | 240 | P240S | CcT | TcC | 1 | 148 | AY.25 | 0.000006 |
ORF3a | 240 | P240S | Cct | Tct | 134 | 134 | B.1.1 | 0.002431 |
ORF3a | 240 | P240S | Cct | Tct | 126 | 126 | AY.43 | 0.000558 |
ORF3a | 240 | P240S | Cct | Tct | 126 | 126 | B.1.2 | 0.001109 |
ORF3a | 240 | P240S | Cct | Tct | 116 | 116 | B.1.1.219 | 0.58 |
ORF3a | 240 | P240S | Cct | Tct | 102 | 102 | B.1.571 | 0.990291 |
ORF3a | 240 | P240S | Cct | Tct | 87 | 87 | AY.44 | 0.00053 |
ORF3a | 240 | P240S | Cct | Tct | 74 | 74 | Q.3 | 0.010732 |
ORF3a | 240 | P240S | Cct | Tct | 62 | 62 | B.1.177 | 0.000816 |
ORF3a | 240 | P240S | Cct | Tct | 60 | 60 | AY.46.2 | 0.038119 |
ORF3a | 240 | P240S | Cct | Tct | 52 | 52 | AY.29 | 0.00082 |
ORF3a | 240 | P240S | Cct | Tct | 48 | 48 | B.1.221 | 0.00341 |
ORF3a | 240 | P240S | Cct | Tct | 47 | 47 | B.1.160 | 0.001466 |
ORF3a | 240 | P240S | Cct | Tct | 44 | 44 | AY.5 | 0.000909 |
ORF3a | 240 | P240S | Cct | Tct | 41 | 41 | B.1.258 | 0.002728 |
ORF3a | 240 | P240S | Cct | Tct | 40 | 40 | B.1.351 | 0.001189 |
ORF3a | 240 | P240S | Cct | Tct | 35 | 36 | AY.23 | 0.002441 |
ORF3a | 240 | P240S | CcT | TcC | 1 | 36 | AY.23 | 0.00007 |
ORF3a | 240 | P240S | Cct | Tct | 34 | 34 | B.1.234 | 0.004486 |
ORF3a | 240 | P240S | Cct | Tct | 34 | 34 | B.1.639 | 0.73913 |
ORF3a | 240 | P240S | Cct | Tct | 32 | 32 | AY.118 | 0.002005 |
ORF3a | 240 | P240S | Cct | Tct | 30 | 30 | B.1.427 | 0.001515 |
ORF3a | 240 | P240S | Cct | Tct | 29 | 29 | AY.4.2 | 0.000629 |
ORF3a | 240 | P240S | Cct | Tct | 28 | 28 | B.1.1.519 | 0.001112 |
ORF3a | 240 | P240S | Cct | Tct | 26 | 26 | Q.1 | 0.003284 |
ORF3a | 240 | P240S | Cct | Tct | 25 | 25 | B.1.177.81 | 0.004733 |
ORF3a | 240 | P240S | Cct | Tct | 23 | 23 | AY.26 | 0.000651 |
ORF3a | 240 | P240S | Cct | Tct | 22 | 22 | AY.39 | 0.000544 |
ORF3a | 240 | P240S | Cct | Tct | 22 | 22 | B.1.243 | 0.001531 |
ORF3a | 240 | P240S | Cct | Tct | 21 | 21 | AY.20 | 0.000816 |
ORF3a | 240 | P240S | Cct | Tct | 19 | 19 | B.1.429 | 0.000447 |
ORF3a | 240 | P240S | Cct | Tct | 18 | 18 | A.27 | 0.029801 |
ORF3a | 240 | P240S | Cct | Tct | 17 | 17 | AY.117 | 0.001437 |
ORF3a | 240 | P240S | Cct | Tct | 17 | 17 | AY.47 | 0.000529 |
ORF3a | 240 | P240S | Cct | Tct | 17 | 17 | B.1.1.216 | 0.015138 |
ORF3a | 240 | P240S | Cct | Tct | 17 | 17 | B.1.637 | 0.001242 |
ORF3a | 240 | P240S | Cct | Tct | 16 | 16 | AY.102 | 0.000424 |
ORF3a | 240 | P240S | Cct | Tct | 16 | 16 | AY.54 | 0.001526 |
ORF3a | 240 | P240S | Cct | Tct | 16 | 16 | AY.98 | 0.001264 |
ORF3a | 240 | P240S | Cct | Tct | 16 | 16 | B.1.1.28 | 0.00498 |
ORF3a | 240 | P240S | Cct | Tct | 14 | 14 | AY.46 | 0.001457 |
ORF3a | 240 | P240S | Cct | Tct | 14 | 14 | B.1.1.214 | 0.000776 |
ORF3a | 240 | P240S | Cct | Tct | 14 | 14 | B.1.177.73 | 0.007928 |
ORF3a | 240 | P240S | Cct | Tct | 13 | 13 | B.1.526 | 0.000306 |
ORF3a | 240 | P240S | Cct | Tct | 12 | 12 | AY.114 | 0.002773 |
ORF3a | 240 | P240S | Cct | Tct | 12 | 12 | AY.121 | 0.001624 |
ORF3a | 240 | P240S | Cct | Tct | 12 | 12 | AY.16 | 0.004556 |
ORF3a | 240 | P240S | Cct | Tct | 12 | 12 | B.1.177.21 | 0.000918 |
ORF3a | 240 | P240S | Cct | Tct | 12 | 12 | B.1.177.62 | 0.014303 |
ORF3a | 240 | P240S | Cct | Tct | 12 | 12 | B.1.497 | 0.003777 |
ORF3a | 240 | P240S | Cct | Tct | 11 | 11 | B.1.1.63 | 0.004244 |
ORF3a | 240 | P240S | Cct | Tct | 11 | 11 | B.1.177.79 | 0.025761 |
ORF3a | 240 | P240S | Cct | Tct | 11 | 11 | B.1.258.17 | 0.001144 |
ORF3a | 240 | P240S | Cct | Tct | 11 | 11 | B.1.36.29 | 0.005691 |
ORF3a | 240 | P240S | Cct | Tct | 11 | 11 | P.1.10 | 0.002964 |
ORF3a | 240 | P240S | Cct | Tct | 10 | 10 | B.1.1.222 | 0.00204 |
ORF3a | 240 | P240S | Cct | Tct | 10 | 10 | B.1.177.12 | 0.001517 |
ORF3a | 240 | P240S | Cct | Tct | 9 | 9 | AY.100 | 0.000414 |
ORF3a | 240 | P240S | Cct | Tct | 9 | 9 | B.1.1.316 | 0.008326 |
ORF3a | 240 | P240S | Cct | Tct | 9 | 9 | B.1.438.1 | 0.000965 |
ORF3a | 240 | P240S | Cct | Tct | 9 | 9 | B.1.596 | 0.000784 |
ORF3a | 240 | P240S | Cct | Tct | 9 | 9 | B.1.609 | 0.004314 |
ORF3a | 240 | P240S | Cct | Tct | 9 | 9 | C.37 | 0.001045 |
ORF3a | 240 | P240S | Cct | Tct | 8 | 8 | B.1.1.464 | 0.011782 |
ORF3a | 240 | P240S | Cct | Tct | 7 | 7 | AY.36 | 0.001037 |
ORF3a | 240 | P240S | Cct | Tct | 7 | 7 | AY.75 | 0.000392 |
ORF3a | 240 | P240S | Cct | Tct | 7 | 7 | B.1.466 | 0.162791 |
ORF3a | 240 | P240S | Cct | Tct | 7 | 7 | B.1.617.1 | 0.000903 |
ORF3a | 240 | P240S | Cct | Tct | 7 | 7 | B.1.621 | 0.00062 |
ORF3a | 240 | P240S | Cct | Tct | 7 | 7 | P.1.2 | 0.008092 |
ORF3a | 240 | P240S | Cct | Tct | 6 | 6 | AY.13 | 0.000966 |
ORF3a | 240 | P240S | Cct | Tct | 6 | 6 | AZ.2 | 0.004926 |
ORF3a | 240 | P240S | Cct | Tct | 6 | 6 | B.1.1.33 | 0.002525 |
ORF3a | 240 | P240S | Cct | Tct | 6 | 6 | B.1.128 | 0.003812 |
ORF3a | 240 | P240S | Cct | Tct | 6 | 6 | B.1.369 | 0.001711 |
ORF3a | 240 | P240S | Cct | Tct | 6 | 6 | B.1.462 | 0.043478 |
ORF3a | 240 | P240S | Cct | Tct | 6 | 6 | B.1.595 | 0.001566 |
ORF3a | 240 | P240S | Cct | Tct | 5 | 5 | AY.120 | 0.000186 |
ORF3a | 240 | P240S | Cct | Tct | 5 | 5 | AY.24 | 0.002155 |
ORF3a | 240 | P240S | Cct | Tct | 5 | 5 | B.1.1.349 | 0.051546 |
ORF3a | 240 | P240S | Cct | Tct | 5 | 5 | B.1.36 | 0.00073 |
ORF3a | 240 | P240S | Cct | Tct | 4 | 4 | B | 0.000511 |
ORF3a | 240 | P240S | Cct | Tct | 4 | 4 | B.1.1.39 | 0.002039 |
ORF3a | 240 | P240S | Cct | Tct | 4 | 4 | B.1.210 | 0.008529 |
ORF3a | 240 | P240S | Cct | Tct | 4 | 4 | B.1.214.2 | 0.002398 |
ORF3a | 240 | P240S | Cct | Tct | 4 | 4 | B.1.396 | 0.002823 |
ORF3a | 240 | P240S | Cct | Tct | 4 | 4 | B.1.517 | 0.001708 |
ORF3a | 240 | P240S | Cct | Tct | 4 | 4 | B.1.575 | 0.001214 |
ORF3a | 240 | P240S | Cct | Tct | 4 | 4 | B.1.576 | 0.003626 |
ORF3a | 240 | P240S | Cct | Tct | 4 | 4 | B.1.628 | 0.001409 |
ORF3a | 240 | P240S | Cct | Tct | 3 | 3 | AY.3.1 | 0.000256 |
ORF3a | 240 | P240S | Cct | Tct | 3 | 3 | AY.33 | 0.0002 |
ORF3a | 240 | P240S | Cct | Tct | 3 | 3 | AY.34.1 | 0.00153 |
ORF3a | 240 | P240S | Cct | Tct | 3 | 3 | AY.42 | 0.000121 |
ORF3a | 240 | P240S | Cct | Tct | 3 | 3 | AY.45 | 0.000365 |
ORF3a | 240 | P240S | Cct | Tct | 3 | 3 | AY.5.4 | 0.00083 |
ORF3a | 240 | P240S | Cct | Tct | 3 | 3 | AY.61 | 0.000314 |
ORF3a | 240 | P240S | Cct | Tct | 3 | 3 | AY.84 | 0.001312 |
ORF3a | 240 | P240S | Cct | Tct | 3 | 3 | AY.9.2 | 0.00011 |
ORF3a | 240 | P240S | Cct | Tct | 3 | 3 | AY.92 | 0.000862 |
ORF3a | 240 | P240S | Cct | Tct | 3 | 3 | AY.99.2 | 0.000276 |
ORF3a | 240 | P240S | Cct | Tct | 3 | 3 | B.1.1.25 | 0.001706 |
ORF3a | 240 | P240S | Cct | Tct | 3 | 3 | B.1.1.306 | 0.001315 |
ORF3a | 240 | P240S | Cct | Tct | 3 | 3 | B.1.1.317 | 0.001235 |
ORF3a | 240 | P240S | Cct | Tct | 3 | 3 | B.1.1.318 | 0.000905 |
ORF3a | 240 | P240S | Cct | Tct | 3 | 3 | B.1.1.326 | 0.005282 |
ORF3a | 240 | P240S | Cct | Tct | 3 | 3 | B.1.1.420 | 0.003018 |
ORF3a | 240 | P240S | Cct | Tct | 3 | 3 | B.1.111 | 0.003525 |
ORF3a | 240 | P240S | Cct | Tct | 3 | 3 | B.1.36.18 | 0.001261 |
ORF3a | 240 | P240S | Cct | Tct | 3 | 3 | B.1.425 | 0.008982 |
ORF3a | 240 | P240S | Cct | Tct | 3 | 3 | B.1.466.2 | 0.001174 |
ORF3a | 240 | P240S | Cct | Tct | 3 | 3 | B.1.564 | 0.001278 |
ORF3a | 240 | P240S | Cct | Tct | 3 | 3 | D.2 | 0.000225 |
ORF3a | 240 | P240S | Cct | Tct | 3 | 3 | K.2 | 0.12 |
ORF3a | 240 | P240S | Cct | Tct | 3 | 3 | L.3 | 0.010638 |
ORF3a | 240 | P240S | Cct | Tct | 3 | 3 | P.1.17 | 0.000485 |
ORF3a | 240 | P240S | Cct | Tct | 3 | 3 | P.1.7 | 0.000958 |
ORF3a | 240 | P240S | Cct | Tct | 3 | 3 | P.2 | 0.00056 |
ORF3a | 240 | P240S | Cct | Tct | 2 | 2 | A.23 | 0.021053 |
ORF3a | 240 | P240S | Cct | Tct | 2 | 2 | AY.105 | 0.001286 |
ORF3a | 240 | P240S | Cct | Tct | 2 | 2 | AY.110 | 0.000225 |
ORF3a | 240 | P240S | Cct | Tct | 2 | 2 | AY.116 | 0.000574 |
ORF3a | 240 | P240S | Cct | Tct | 2 | 2 | AY.22 | 0.004184 |
ORF3a | 240 | P240S | Cct | Tct | 2 | 2 | AY.27 | 0.000129 |
ORF3a | 240 | P240S | Cct | Tct | 2 | 2 | AY.29.1 | 0.000441 |
ORF3a | 240 | P240S | Cct | Tct | 2 | 2 | AY.32 | 0.001065 |
ORF3a | 240 | P240S | Cct | Tct | 2 | 2 | AY.39.1 | 0.000079 |
ORF3a | 240 | P240S | Cct | Tct | 2 | 2 | AY.46.4 | 0.000329 |
ORF3a | 240 | P240S | Cct | Tct | 2 | 2 | AY.46.6 | 0.000144 |
ORF3a | 240 | P240S | Cct | Tct | 2 | 2 | AY.6 | 0.000082 |
ORF3a | 240 | P240S | Cct | Tct | 2 | 2 | AY.65 | 0.001066 |
ORF3a | 240 | P240S | Cct | Tct | 2 | 2 | AY.68 | 0.000547 |
ORF3a | 240 | P240S | Cct | Tct | 2 | 2 | AY.7.1 | 0.000225 |
ORF3a | 240 | P240S | Cct | Tct | 2 | 2 | AY.9.1 | 0.000167 |
ORF3a | 240 | P240S | Cct | Tct | 2 | 2 | AY.93 | 0.000546 |
ORF3a | 240 | P240S | Cct | Tct | 2 | 2 | AY.98.1 | 0.000097 |
ORF3a | 240 | P240S | Cct | Tct | 2 | 2 | B.1.1.121 | 0.004854 |
ORF3a | 240 | P240S | Cct | Tct | 2 | 2 | B.1.1.176 | 0.000879 |
ORF3a | 240 | P240S | Cct | Tct | 2 | 2 | B.1.1.205 | 0.007435 |
ORF3a | 240 | P240S | Cct | Tct | 2 | 2 | B.1.1.289 | 0.004167 |
ORF3a | 240 | P240S | Cct | Tct | 2 | 2 | B.1.1.311 | 0.000716 |
ORF3a | 240 | P240S | Cct | Tct | 2 | 2 | B.1.1.487 | 0.011173 |
ORF3a | 240 | P240S | Cct | Tct | 2 | 2 | B.1.143 | 0.042553 |
ORF3a | 240 | P240S | Cct | Tct | 2 | 2 | B.1.160.32 | 0.008584 |
ORF3a | 240 | P240S | Cct | Tct | 2 | 2 | B.1.195 | 0.01005 |
ORF3a | 240 | P240S | Cct | Tct | 2 | 2 | B.1.208 | 0.08 |
ORF3a | 240 | P240S | Cct | Tct | 2 | 2 | B.1.232 | 0.001075 |
ORF3a | 240 | P240S | Cct | Tct | 2 | 2 | B.1.325 | 0.013793 |
ORF3a | 240 | P240S | Cct | Tct | 2 | 2 | B.1.36.27 | 0.001527 |
ORF3a | 240 | P240S | Cct | Tct | 2 | 2 | B.1.400 | 0.000858 |
ORF3a | 240 | P240S | Cct | Tct | 2 | 2 | B.1.404 | 0.002604 |
ORF3a | 240 | P240S | Cct | Tct | 2 | 2 | B.1.480 | 0.004975 |
ORF3a | 240 | P240S | Cct | Tct | 2 | 2 | B.1.499 | 0.002101 |
ORF3a | 240 | P240S | Cct | Tct | 2 | 2 | B.1.532 | 0.012422 |
ORF3a | 240 | P240S | Cct | Tct | 2 | 2 | B.1.575.1 | 0.004878 |
ORF3a | 240 | P240S | Cct | Tct | 2 | 2 | P.1.14 | 0.000096 |
ORF3a | 240 | P240S | Cct | Tct | 2 | 2 | Q.7 | 0.002222 |
ORF3a | 240 | P240S | Cct | Tct | 2 | 2 | R.1 | 0.00018 |
ORF3a | 240 | P240S | Cct | Tct | 2 | 2 | S.1 | 0.009901 |
ORF3a | 240 | P240S | Cct | Tct | 1 | 1 | A | 0.000387 |
ORF3a | 240 | P240S | Cct | Tct | 1 | 1 | A.2.2 | 0.001689 |
ORF3a | 240 | P240S | Cct | Tct | 1 | 1 | A.2.5 | 0.000499 |
ORF3a | 240 | P240S | Cct | Tct | 1 | 1 | A.2.5.1 | 0.004808 |
ORF3a | 240 | P240S | Cct | Tct | 1 | 1 | AE.1 | 0.011364 |
ORF3a | 240 | P240S | Cct | Tct | 1 | 1 | AM.2 | 0.111111 |
ORF3a | 240 | P240S | Cct | Tct | 1 | 1 | AV.1 | 0.005051 |
ORF3a | 240 | P240S | Cct | Tct | 1 | 1 | AY.1 | 0.000396 |
ORF3a | 240 | P240S | Cct | Tct | 1 | 1 | AY.10 | 0.00053 |
ORF3a | 240 | P240S | Cct | Tct | 1 | 1 | AY.104 | 0.001984 |
ORF3a | 240 | P240S | Cct | Tct | 1 | 1 | AY.111 | 0.000183 |
ORF3a | 240 | P240S | Cct | Tct | 1 | 1 | AY.113 | 0.000142 |
ORF3a | 240 | P240S | Cct | Tct | 1 | 1 | AY.14 | 0.000088 |
ORF3a | 240 | P240S | Cct | Tct | 1 | 1 | AY.16.1 | 0.00047 |
ORF3a | 240 | P240S | Cct | Tct | 1 | 1 | AY.19 | 0.00114 |
ORF3a | 240 | P240S | Cct | Tct | 1 | 1 | AY.2 | 0.000356 |
ORF3a | 240 | P240S | Cct | Tct | 1 | 1 | AY.23.1 | 0.000417 |
ORF3a | 240 | P240S | Cct | Tct | 1 | 1 | AY.30 | 0.000396 |
ORF3a | 240 | P240S | Cct | Tct | 1 | 1 | AY.5.3 | 0.000337 |
ORF3a | 240 | P240S | Cct | Tct | 1 | 1 | AY.53 | 0.000288 |
ORF3a | 240 | P240S | Cct | Tct | 1 | 1 | AY.62 | 0.000436 |
ORF3a | 240 | P240S | Cct | Tct | 1 | 1 | AY.63 | 0.000387 |
ORF3a | 240 | P240S | Cct | Tct | 1 | 1 | AY.73 | 0.000665 |
ORF3a | 240 | P240S | Cct | Tct | 1 | 1 | AY.75.1 | 0.00018 |
ORF3a | 240 | P240S | Cct | Tct | 1 | 1 | AY.85 | 0.000427 |
ORF3a | 240 | P240S | Cct | Tct | 1 | 1 | AY.87 | 0.000833 |
ORF3a | 240 | P240S | Cct | Tct | 1 | 1 | AY.95 | 0.000761 |
ORF3a | 240 | P240S | Cct | Tct | 1 | 1 | B.1.1.141 | 0.002012 |
ORF3a | 240 | P240S | Cct | Tct | 1 | 1 | B.1.1.160 | 0.02381 |
ORF3a | 240 | P240S | Cct | Tct | 1 | 1 | B.1.1.181 | 0.004545 |
ORF3a | 240 | P240S | Cct | Tct | 1 | 1 | B.1.1.189 | 0.001513 |
ORF3a | 240 | P240S | Cct | Tct | 1 | 1 | B.1.1.210 | 0.005714 |
ORF3a | 240 | P240S | Cct | Tct | 1 | 1 | B.1.1.221 | 0.010101 |
ORF3a | 240 | P240S | Cct | Tct | 1 | 1 | B.1.1.258 | 0.003257 |
ORF3a | 240 | P240S | Cct | Tct | 1 | 1 | B.1.1.265 | 0.003155 |
ORF3a | 240 | P240S | Cct | Tct | 1 | 1 | B.1.1.279 | 0.001121 |
ORF3a | 240 | P240S | Cct | Tct | 1 | 1 | B.1.1.297 | 0.002237 |
ORF3a | 240 | P240S | Cct | Tct | 1 | 1 | B.1.1.305 | 0.003861 |
ORF3a | 240 | P240S | Cct | Tct | 1 | 1 | B.1.1.331 | 0.011628 |
ORF3a | 240 | P240S | Cct | Tct | 1 | 1 | B.1.1.335 | 0.012987 |
ORF3a | 240 | P240S | Cct | Tct | 1 | 1 | B.1.1.348 | 0.000796 |
ORF3a | 240 | P240S | Cct | Tct | 1 | 1 | B.1.1.354 | 0.004386 |
ORF3a | 240 | P240S | Cct | Tct | 1 | 1 | B.1.1.385 | 0.004464 |
ORF3a | 240 | P240S | Cct | Tct | 1 | 1 | B.1.1.397 | 0.002252 |
ORF3a | 240 | P240S | Cct | Tct | 1 | 1 | B.1.1.409 | 0.002833 |
ORF3a | 240 | P240S | Cct | Tct | 1 | 1 | B.1.1.429 | 0.004608 |
ORF3a | 240 | P240S | Cct | Tct | 1 | 1 | B.1.1.486 | 0.001577 |
ORF3a | 240 | P240S | Cct | Tct | 1 | 1 | B.1.1.50 | 0.000679 |
ORF3a | 240 | P240S | Cct | Tct | 1 | 1 | B.1.1.507 | 0.008696 |
ORF3a | 240 | P240S | Cct | Tct | 1 | 1 | B.1.1.521 | 0.005348 |
ORF3a | 240 | P240S | Cct | Tct | 1 | 1 | B.1.1.525 | 0.005464 |
ORF3a | 240 | P240S | Cct | Tct | 1 | 1 | B.1.1.526 | 0.003546 |
ORF3a | 240 | P240S | Cct | Tct | 1 | 1 | B.1.1.528 | 0.004808 |
ORF3a | 240 | P240S | Cct | Tct | 1 | 1 | B.1.1.70 | 0.000341 |
ORF3a | 240 | P240S | Cct | Tct | 1 | 1 | B.1.147 | 0.000756 |
ORF3a | 240 | P240S | Cct | Tct | 1 | 1 | B.1.160.10 | 0.008065 |
ORF3a | 240 | P240S | Cct | Tct | 1 | 1 | B.1.177.24 | 0.001295 |
ORF3a | 240 | P240S | Cct | Tct | 1 | 1 | B.1.177.32 | 0.00135 |
ORF3a | 240 | P240S | Cct | Tct | 1 | 1 | B.1.177.35 | 0.000691 |
ORF3a | 240 | P240S | Cct | Tct | 1 | 1 | B.1.177.4 | 0.000211 |
ORF3a | 240 | P240S | Cct | Tct | 1 | 1 | B.1.177.44 | 0.000519 |
ORF3a | 240 | P240S | Cct | Tct | 1 | 1 | B.1.177.52 | 0.001757 |
ORF3a | 240 | P240S | Cct | Tct | 1 | 1 | B.1.177.69 | 0.001484 |
ORF3a | 240 | P240S | Cct | Tct | 1 | 1 | B.1.177.82 | 0.000477 |
ORF3a | 240 | P240S | Cct | Tct | 1 | 1 | B.1.239 | 0.001221 |
ORF3a | 240 | P240S | Cct | Tct | 1 | 1 | B.1.258.14 | 0.00098 |
ORF3a | 240 | P240S | Cct | Tct | 1 | 1 | B.1.264 | 0.012346 |
ORF3a | 240 | P240S | Cct | Tct | 1 | 1 | B.1.351.2 | 0.000303 |
ORF3a | 240 | P240S | Cct | Tct | 1 | 1 | B.1.351.3 | 0.000876 |
ORF3a | 240 | P240S | Cct | Tct | 1 | 1 | B.1.36.35 | 0.002604 |
ORF3a | 240 | P240S | Cct | Tct | 1 | 1 | B.1.36.39 | 0.002217 |
ORF3a | 240 | P240S | Cct | Tct | 1 | 1 | B.1.36.7 | 0.004 |
ORF3a | 240 | P240S | Cct | Tct | 1 | 1 | B.1.36.8 | 0.001 |
ORF3a | 240 | P240S | Cct | Tct | 1 | 1 | B.1.362.2 | 0.004717 |
ORF3a | 240 | P240S | Cct | Tct | 1 | 1 | B.1.375 | 0.00082 |
ORF3a | 240 | P240S | Cct | Tct | 1 | 1 | B.1.382 | 0.008929 |
ORF3a | 240 | P240S | Cct | Tct | 1 | 1 | B.1.408 | 0.00369 |
ORF3a | 240 | P240S | Cct | Tct | 1 | 1 | B.1.411 | 0.003704 |
ORF3a | 240 | P240S | Cct | Tct | 1 | 1 | B.1.416.1 | 0.001563 |
ORF3a | 240 | P240S | Cct | Tct | 1 | 1 | B.1.426 | 0.001009 |
ORF3a | 240 | P240S | Cct | Tct | 1 | 1 | B.1.451 | 0.008197 |
ORF3a | 240 | P240S | Cct | Tct | 1 | 1 | B.1.468 | 0.005714 |
ORF3a | 240 | P240S | Cct | Tct | 1 | 1 | B.1.474 | 0.001901 |
ORF3a | 240 | P240S | Cct | Tct | 1 | 1 | B.1.525 | 0.000113 |
ORF3a | 240 | P240S | Cct | Tct | 1 | 1 | B.1.551 | 0.00129 |
ORF3a | 240 | P240S | Cct | Tct | 1 | 1 | B.1.564.1 | 0.001577 |
ORF3a | 240 | P240S | Cct | Tct | 1 | 1 | B.1.565 | 0.00081 |
ORF3a | 240 | P240S | Cct | Tct | 1 | 1 | B.1.568 | 0.001111 |
ORF3a | 240 | P240S | Cct | Tct | 1 | 1 | B.1.577 | 0.000687 |
ORF3a | 240 | P240S | Cct | Tct | 1 | 1 | B.1.582 | 0.000491 |
ORF3a | 240 | P240S | Cct | Tct | 1 | 1 | B.1.606 | 0.006024 |
ORF3a | 240 | P240S | Cct | Tct | 1 | 1 | B.1.619 | 0.000871 |
ORF3a | 240 | P240S | Cct | Tct | 1 | 1 | B.1.620 | 0.000946 |
ORF3a | 240 | P240S | Cct | Tct | 1 | 1 | B.1.631 | 0.003367 |
ORF3a | 240 | P240S | Cct | Tct | 1 | 1 | B.1.8 | 0.001972 |
ORF3a | 240 | P240S | Cct | Tct | 1 | 1 | B.1.93 | 0.000934 |
ORF3a | 240 | P240S | Cct | Tct | 1 | 1 | B.28 | 0.003279 |
ORF3a | 240 | P240S | Cct | Tct | 1 | 1 | B.3 | 0.000831 |
ORF3a | 240 | P240S | Cct | Tct | 1 | 1 | B.40 | 0.000364 |
ORF3a | 240 | P240S | Cct | Tct | 1 | 1 | B.6 | 0.00091 |
ORF3a | 240 | P240S | Cct | Tct | 1 | 1 | C.35 | 0.000774 |
ORF3a | 240 | P240S | Cct | Tct | 1 | 1 | C.36 | 0.000911 |
ORF3a | 240 | P240S | Cct | Tct | 1 | 1 | P.1.12 | 0.000484 |
ORF3a | 240 | P240S | Cct | Tct | 1 | 1 | P.1.15 | 0.000232 |
ORF3a | 240 | P240S | Cct | Tct | 1 | 1 | P.1.6 | 0.001946 |
ORF3a | 240 | P240S | Cct | Tct | 1 | 1 | P.3 | 0.001595 |
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CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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