CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF3a : Mut = P240P

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF3a240P240PsynccTccC9018300.92119926110-26112
ORF3a240P240PsynccTccA901540.059933426110-26112
ORF3a240P240PsynccTccG901170.018867926110-26112

Details of the mutation P240P within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF3a240P240PccTccC830901All0.000159
ORF3a240P240PccTccA54901All0.00001
ORF3a240P240PccTccG17901All0.000003
ORF3a240P240PccTccC315315AY.230.021971
ORF3a240P240PccTccC114114C.380.919355
ORF3a240P240PccTccC9999AY.470.003079
ORF3a240P240PccTccC2139B.1.1.70.000019
ORF3a240P240PccTccA1839B.1.1.70.000016
ORF3a240P240PccTccC2637B.1.617.20.000098
ORF3a240P240PccTccA1137B.1.617.20.000041
ORF3a240P240PccTccC3536AY.30.000348
ORF3a240P240PccTccA136AY.30.00001
ORF3a240P240PccTccC2323AY.34.10.011729
ORF3a240P240PccTccC2222B.1.1600.000686
ORF3a240P240PccTccC2121AY.75.10.003787
ORF3a240P240PccTccC2020AY.340.001939
ORF3a240P240PccTccC1616AY.330.001068
ORF3a240P240PccTccC1013AY.430.000044
ORF3a240P240PccTccA313AY.430.000013
ORF3a240P240PccTccC1213AY.440.000073
ORF3a240P240PccTccA113AY.440.000006
ORF3a240P240PccTccG1011C.370.001161
ORF3a240P240PccTccC111C.370.000116
ORF3a240P240PccTccC610AY.40.000009
ORF3a240P240PccTccA310AY.40.000005
ORF3a240P240PccTccG110AY.40.000002
ORF3a240P240PccTccC1010B.1.20.000088
ORF3a240P240PccTccC79AY.1030.000043
ORF3a240P240PccTccA19AY.1030.000006
ORF3a240P240PccTccG19AY.1030.000006
ORF3a240P240PccTccC77AY.250.000042
ORF3a240P240PccTccC77AY.740.00081
ORF3a240P240PccTccC55AY.460.00052
ORF3a240P240PccTccC35P.10.000047
ORF3a240P240PccTccA15P.10.000016
ORF3a240P240PccTccG15P.10.000016
ORF3a240P240PccTccA24AY.1020.000053
ORF3a240P240PccTccC24AY.1020.000053
ORF3a240P240PccTccC44AY.390.000099
ORF3a240P240PccTccC34B.10.000027
ORF3a240P240PccTccA14B.10.000009
ORF3a240P240PccTccA44B.1.10.000073
ORF3a240P240PccTccC44B.1.1.5190.000159
ORF3a240P240PccTccA23AY.1200.000074
ORF3a240P240PccTccC13AY.1200.000037
ORF3a240P240PccTccC33AY.3.10.000256
ORF3a240P240PccTccC33B.1.177.860.00055
ORF3a240P240PccTccC22AY.240.000862
ORF3a240P240PccTccC22AY.750.000112
ORF3a240P240PccTccC22B.1.1770.000026
ORF3a240P240PccTccA22B.1.177.600.000437
ORF3a240P240PccTccC12B.1.2210.000071
ORF3a240P240PccTccG12B.1.2210.000071
ORF3a240P240PccTccC22C.36.3.10.005435
ORF3a240P240PccTccC11AY.1130.000142
ORF3a240P240PccTccC11AY.270.000065
ORF3a240P240PccTccA11AY.4.20.000022
ORF3a240P240PccTccC11AY.46.10.001027
ORF3a240P240PccTccC11AY.46.60.000072
ORF3a240P240PccTccC11AY.530.000288
ORF3a240P240PccTccG11AY.540.000095
ORF3a240P240PccTccC11AY.580.000907
ORF3a240P240PccTccG11AY.60.000041
ORF3a240P240PccTccC11AY.690.000187
ORF3a240P240PccTccC11AY.840.000437
ORF3a240P240PccTccC11AY.9.20.000037
ORF3a240P240PccTccC11AY.980.000079
ORF3a240P240PccTccC11B0.000128
ORF3a240P240PccTccC11B.1.1.4320.001266
ORF3a240P240PccTccA11B.1.177.170.000821
ORF3a240P240PccTccA11B.1.2580.000067
ORF3a240P240PccTccC11B.1.3510.00003
ORF3a240P240PccTccA11B.1.36.80.001
ORF3a240P240PccTccC11B.1.4290.000024
ORF3a240P240PccTccC11B.1.5230.002451
ORF3a240P240PccTccC11B.1.5760.000907
ORF3a240P240PccTccC11B.1.5960.000087
ORF3a240P240PccTccC11B.1.6280.000352
ORF3a240P240PccTccC11B.1.6370.000073
ORF3a240P240PccTccC11B.450.003831
ORF3a240P240PccTccG11P.1.20.001156
ORF3a240P240PccTccC11Q.10.000126