CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF3a : Mut = P104A

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF3a104P104AnonsynCctGct25210.8425702-25704
ORF3a104P104AnonsynCcTGcC2530.1225702-25704
ORF3a104P104AnonsynCcTGcA2510.0425702-25704

Details of the mutation P104A within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF3a104P104ACctGct2125All0.000004
ORF3a104P104ACcTGcC325All0.000001
ORF3a104P104ACcTGcA125All0
ORF3a104P104ACctGct1313B.1.20.000114
ORF3a104P104ACcTGcC33AY.340.000291
ORF3a104P104ACctGct22AY.1080.002205
ORF3a104P104ACctGct12AY.430.000004
ORF3a104P104ACcTGcA12AY.430.000004
ORF3a104P104ACctGct22B.1.10.000036
ORF3a104P104ACctGct11AY.40.000002
ORF3a104P104ACctGct11B.10.000009
ORF3a104P104ACctGct11B.1.1.70.000001