CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF3a : Mut = L95L

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF3a95L95LsynttGttA7875680.72172825675-25677
ORF3a95L95LsynTtgCtg7871940.24650625675-25677
ORF3a95L95LsynTtGCtA787250.031766225675-25677

Details of the mutation L95L within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF3a95L95LttGttA568787All0.000109
ORF3a95L95LTtgCtg194787All0.000037
ORF3a95L95LTtGCtA25787All0.000005
ORF3a95L95LttGttA340346AY.40.000529
ORF3a95L95LTtgCtg6346AY.40.000009
ORF3a95L95LttGttA93128B.1.1.70.000083
ORF3a95L95LTtgCtg24128B.1.1.70.000021
ORF3a95L95LTtGCtA11128B.1.1.70.00001
ORF3a95L95LTtgCtg7481AY.440.00045
ORF3a95L95LttGttA781AY.440.000043
ORF3a95L95LttGttA1528B.1.617.20.000056
ORF3a95L95LTtgCtg1228B.1.617.20.000045
ORF3a95L95LTtGCtA128B.1.617.20.000004
ORF3a95L95LTtgCtg1422B.1.20.000123
ORF3a95L95LttGttA822B.1.20.00007
ORF3a95L95LTtgCtg1313AY.1030.000081
ORF3a95L95LTtGCtA613B.10.000055
ORF3a95L95LTtgCtg613B.10.000055
ORF3a95L95LttGttA113B.10.000009
ORF3a95L95LttGttA1112AY.330.000735
ORF3a95L95LTtgCtg112AY.330.000067
ORF3a95L95LTtgCtg1111AY.9.20.000404
ORF3a95L95LttGttA910AY.250.000054
ORF3a95L95LTtgCtg110AY.250.000006
ORF3a95L95LttGttA99AY.1090.006657
ORF3a95L95LTtgCtg99Q.40.004093
ORF3a95L95LttGttA48B.1.617.10.000516
ORF3a95L95LTtGCtA28B.1.617.10.000258
ORF3a95L95LTtgCtg28B.1.617.10.000258
ORF3a95L95LttGttA66B.1.1600.000187
ORF3a95L95LttGttA45AY.30.00004
ORF3a95L95LTtgCtg15AY.30.00001
ORF3a95L95LttGttA55AY.98.10.000242
ORF3a95L95LttGttA55B.1.1310.04386
ORF3a95L95LttGttA44AY.390.000099
ORF3a95L95LttGttA34AY.430.000013
ORF3a95L95LTtgCtg14AY.430.000004
ORF3a95L95LttGttA44B.1.1.10.001307
ORF3a95L95LTtgCtg33AY.980.000237
ORF3a95L95LttGttA23B.1.10.000036
ORF3a95L95LTtgCtg13B.1.10.000018
ORF3a95L95LttGttA23B.1.2430.000139
ORF3a95L95LTtgCtg13B.1.2430.00007
ORF3a95L95LttGttA33B.1.4270.000151
ORF3a95L95LttGttA33B.1.80.005917
ORF3a95L95LttGttA23P.10.000032
ORF3a95L95LTtgCtg13P.10.000016
ORF3a95L95LttGttA22AY.1020.000053
ORF3a95L95LttGttA22AY.460.000208
ORF3a95L95LTtgCtg22AY.60.000082
ORF3a95L95LttGttA22AY.90.000135
ORF3a95L95LttGttA22B.1.1.2290.011494
ORF3a95L95LTtgCtg22B.1.1.4160.00181
ORF3a95L95LttGttA11AY.1000.000046
ORF3a95L95LttGttA11AY.1140.000231
ORF3a95L95LTtgCtg11AY.1170.000085
ORF3a95L95LttGttA11AY.1190.000035
ORF3a95L95LTtgCtg11AY.1200.000037
ORF3a95L95LttGttA11AY.210.001898
ORF3a95L95LttGttA11AY.230.00007
ORF3a95L95LttGttA11AY.4.20.000022
ORF3a95L95LttGttA11AY.5.40.000277
ORF3a95L95LTtgCtg11AY.520.000814
ORF3a95L95LttGttA11AY.590.00053
ORF3a95L95LTtgCtg11AY.740.000116
ORF3a95L95LTtGCtA11AY.750.000056
ORF3a95L95LttGttA11AY.810.001992
ORF3a95L95LTtgCtg11AY.840.000437
ORF3a95L95LTtgCtg11AY.99.20.000092
ORF3a95L95LttGttA11B.1.1.3740.002375
ORF3a95L95LTtgCtg11B.1.1.5190.00004
ORF3a95L95LttGttA11B.1.1770.000013
ORF3a95L95LTtgCtg11B.1.177.210.000076
ORF3a95L95LTtGCtA11B.1.1790.003759
ORF3a95L95LTtGCtA11B.1.2600.003344
ORF3a95L95LttGttA11B.1.360.000146
ORF3a95L95LTtGCtA11B.1.36.80.001
ORF3a95L95LttGttA11B.1.4970.000315
ORF3a95L95LttGttA11B.1.5170.000427
ORF3a95L95LTtGCtA11B.1.5370.02
ORF3a95L95LttGttA11B.1.5750.000303
ORF3a95L95LttGttA11B.1.5820.000491
ORF3a95L95LttGttA11B.1.6210.000089
ORF3a95L95LttGttA11B.400.000364
ORF3a95L95LTtgCtg11D.20.000075
ORF3a95L95LttGttA11P.1.10.000318
ORF3a95L95LttGttA11P.1.150.000232