CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF3a : Mut = L65F

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF3a65L65FnonsynCtcTtc252325170.99762225585-25587
ORF3a65L65FnonsynCtCTtT252360.0023781225585-25587

Details of the mutation L65F within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF3a65L65FCtcTtc25172523All0.000481
ORF3a65L65FCtCTtT62523All0.000001
ORF3a65L65FCtcTtc424425AY.40.00066
ORF3a65L65FCtCTtT1425AY.40.000002
ORF3a65L65FCtcTtc395396B.1.1.70.000354
ORF3a65L65FCtCTtT1396B.1.1.70.000001
ORF3a65L65FCtcTtc276276B.1.20.00243
ORF3a65L65FCtcTtc110110B.1.1600.003431
ORF3a65L65FCtcTtc9898B.1.617.20.000369
ORF3a65L65FCtcTtc8484AY.1030.000522
ORF3a65L65FCtcTtc7171AY.430.000315
ORF3a65L65FCtcTtc6868B.10.000623
ORF3a65L65FCtcTtc5858AY.440.000353
ORF3a65L65FCtcTtc4646B.1.177.860.008439
ORF3a65L65FCtcTtc4343AY.30.000428
ORF3a65L65FCtcTtc4040AY.250.000241
ORF3a65L65FCtcTtc3939P.10.000614
ORF3a65L65FCtcTtc3737AY.120.011694
ORF3a65L65FCtcTtc3737B.1.3510.0011
ORF3a65L65FCtcTtc3636B.1.10.000653
ORF3a65L65FCtcTtc2929B.1.360.004231
ORF3a65L65FCtcTtc2828B.1.1770.000369
ORF3a65L65FCtcTtc2424AY.9.10.002009
ORF3a65L65FCtcTtc2323AY.200.000894
ORF3a65L65FCtcTtc2222AY.390.000544
ORF3a65L65FCtcTtc2222AY.7.20.012304
ORF3a65L65FCtcTtc2020B.1.2100.042644
ORF3a65L65FCtcTtc2020B.1.5770.013746
ORF3a65L65FCtcTtc1717AY.1020.000451
ORF3a65L65FCtcTtc1616B.1.6320.107383
ORF3a65L65FCtcTtc1515P.1.140.000717
ORF3a65L65FCtcTtc1414B.1.617.10.001806
ORF3a65L65FCtcTtc1212AY.1050.007717
ORF3a65L65FCtcTtc1212B.1.1.5190.000477
ORF3a65L65FCtcTtc1212C.370.001393
ORF3a65L65FCtcTtc1111AY.230.000767
ORF3a65L65FCtcTtc1111B.1.4290.000259
ORF3a65L65FCtcTtc1111B.1.6210.000974
ORF3a65L65FCtcTtc1010AY.39.10.000396
ORF3a65L65FCtcTtc1010B.1.1.3170.004117
ORF3a65L65FCtcTtc99AY.60.00037
ORF3a65L65FCtcTtc99AY.99.20.000829
ORF3a65L65FCtcTtc88B.1.1.2770.00607
ORF3a65L65FCtcTtc88B.1.258.170.000832
ORF3a65L65FCtcTtc77AY.1190.000247
ORF3a65L65FCtcTtc77AY.330.000467
ORF3a65L65FCtcTtc77B.1.36.80.007
ORF3a65L65FCtcTtc360.166667
ORF3a65L65FCtCTtT360.166667
ORF3a65L65FCtcTtc66AY.1000.000276
ORF3a65L65FCtcTtc66AY.470.000187
ORF3a65L65FCtcTtc66AY.50.000124
ORF3a65L65FCtcTtc66B.1.1.4340.002091
ORF3a65L65FCtcTtc66B.1.2580.000399
ORF3a65L65FCtcTtc66B.1.4270.000303
ORF3a65L65FCtcTtc55AY.1200.000186
ORF3a65L65FCtcTtc55AY.290.000079
ORF3a65L65FCtcTtc55B.1.1.4160.004525
ORF3a65L65FCtcTtc55B.1.36.100.023923
ORF3a65L65FCtcTtc55B.1.466.20.001956
ORF3a65L65FCtcTtc44AY.1130.00057
ORF3a65L65FCtcTtc44AY.1170.000338
ORF3a65L65FCtcTtc44AY.460.000416
ORF3a65L65FCtcTtc44AY.740.000463
ORF3a65L65FCtcTtc44B.1.1.2220.000816
ORF3a65L65FCtcTtc44B.1.2430.000278
ORF3a65L65FCtcTtc44B.1.3110.001098
ORF3a65L65FCtcTtc44B.1.3690.001141
ORF3a65L65FCtcTtc44B.1.4560.013072
ORF3a65L65FCtcTtc44B.1.6200.003784
ORF3a65L65FCtcTtc44P.1.170.000647
ORF3a65L65FCtcTtc33AY.400.002893
ORF3a65L65FCtcTtc33AY.550.002752
ORF3a65L65FCtcTtc33AY.880.002653
ORF3a65L65FCtcTtc33AY.90.000203
ORF3a65L65FCtcTtc33B.1.1.2140.000166
ORF3a65L65FCtcTtc33B.1.1.370.000579
ORF3a65L65FCtcTtc33B.1.2210.000213
ORF3a65L65FCtcTtc33B.1.2390.003663
ORF3a65L65FCtcTtc23B.1.258.140.001961
ORF3a65L65FCtCTtT13B.1.258.140.00098
ORF3a65L65FCtcTtc33C.350.002322
ORF3a65L65FCtcTtc33P.1.160.001122
ORF3a65L65FCtcTtc33P.1.70.000958
ORF3a65L65FCtcTtc33Q.10.000379
ORF3a65L65FCtcTtc33R.10.00027
ORF3a65L65FCtcTtc22AY.1110.000366
ORF3a65L65FCtcTtc22AY.120.10.000642
ORF3a65L65FCtcTtc22AY.1210.000271
ORF3a65L65FCtcTtc22AY.210.003795
ORF3a65L65FCtcTtc22AY.260.000057
ORF3a65L65FCtcTtc22AY.29.10.000441
ORF3a65L65FCtcTtc22AY.3.10.000171
ORF3a65L65FCtcTtc22AY.4.20.000043
ORF3a65L65FCtcTtc22AY.4.2.10.000298
ORF3a65L65FCtcTtc22AY.4.40.000818
ORF3a65L65FCtcTtc22AY.450.000243
ORF3a65L65FCtcTtc22AY.540.000191
ORF3a65L65FCtcTtc22AY.570.001312
ORF3a65L65FCtcTtc22AY.610.00021
ORF3a65L65FCtcTtc22AY.620.000871
ORF3a65L65FCtcTtc22AY.750.000112
ORF3a65L65FCtcTtc22AY.75.10.000361
ORF3a65L65FCtcTtc22AY.9.20.000073
ORF3a65L65FCtcTtc22AY.920.000575
ORF3a65L65FCtcTtc22AY.940.000885
ORF3a65L65FCtcTtc22AY.98.10.000097
ORF3a65L65FCtcTtc22B0.000256
ORF3a65L65FCtcTtc22B.1.1.3060.000877
ORF3a65L65FCtcTtc22B.1.214.40.018182
ORF3a65L65FCtcTtc22B.1.351.30.001753
ORF3a65L65FCtcTtc22B.60.00182
ORF3a65L65FCtcTtc22P.20.000373
ORF3a65L65FCtcTtc22P.30.00319
ORF3a65L65FCtcTtc11A0.000387
ORF3a65L65FCtcTtc11AA.50.016129
ORF3a65L65FCtcTtc11AY.1070.000466
ORF3a65L65FCtcTtc11AY.1100.000113
ORF3a65L65FCtcTtc11AY.1180.000063
ORF3a65L65FCtcTtc11AY.360.000148
ORF3a65L65FCtcTtc11AY.46.50.000198
ORF3a65L65FCtcTtc11AY.5.30.000337
ORF3a65L65FCtcTtc11AY.640.000595
ORF3a65L65FCtcTtc11AY.650.000533
ORF3a65L65FCtcTtc11AY.670.000464
ORF3a65L65FCtcTtc11AY.690.000187
ORF3a65L65FCtcTtc11AY.930.000273
ORF3a65L65FCtcTtc11AY.950.000761
ORF3a65L65FCtcTtc11AY.980.000079
ORF3a65L65FCtcTtc11B.1.1.10.000327
ORF3a65L65FCtcTtc11B.1.1.280.000311
ORF3a65L65FCtcTtc11B.1.1.2840.000107
ORF3a65L65FCtcTtc11B.1.1.3160.000925
ORF3a65L65FCtcTtc11B.1.1.3180.000302
ORF3a65L65FCtcTtc11B.1.1.330.000421
ORF3a65L65FCtcTtc11B.1.1.3690.000446
ORF3a65L65FCtcTtc11B.1.1.390.00051
ORF3a65L65FCtcTtc11B.1.1.3960.045455
ORF3a65L65FCtcTtc11B.1.1.500.000679
ORF3a65L65FCtcTtc11B.1.1.530.013699
ORF3a65L65FCtcTtc11B.1.1.80.003584
ORF3a65L65FCtcTtc11B.1.1270.002198
ORF3a65L65FCtcTtc11B.1.130.002375
ORF3a65L65FCtcTtc11B.1.177.120.000152
ORF3a65L65FCtcTtc11B.1.177.200.001517
ORF3a65L65FCtcTtc11B.1.177.40.000211
ORF3a65L65FCtcTtc11B.1.2340.000132
ORF3a65L65FCtcTtc11B.1.258.220.002667
ORF3a65L65FCtcTtc11B.1.3960.000706
ORF3a65L65FCtcTtc11B.1.4000.000429
ORF3a65L65FCtcTtc11B.1.4090.000781
ORF3a65L65FCtcTtc11B.1.4260.001009
ORF3a65L65FCtcTtc11B.1.438.10.000107
ORF3a65L65FCtcTtc11B.1.4650.003802
ORF3a65L65FCtcTtc11B.1.4970.000315
ORF3a65L65FCtcTtc11B.1.5250.000113
ORF3a65L65FCtcTtc11B.1.5260.000024
ORF3a65L65FCtcTtc11B.1.5760.000907
ORF3a65L65FCtcTtc11B.1.5950.000261
ORF3a65L65FCtcTtc11B.1.5960.000087
ORF3a65L65FCtcTtc11B.1.6050.005952
ORF3a65L65FCtcTtc11B.1.6090.000479
ORF3a65L65FCtcTtc11B.1.621.10.000506
ORF3a65L65FCtcTtc11B.1.6230.000536
ORF3a65L65FCtcTtc11B.1.6300.005236
ORF3a65L65FCtcTtc11B.1.930.000934
ORF3a65L65FCtcTtc11D.20.000075
ORF3a65L65FCtcTtc11P.1.10.000318
ORF3a65L65FCtcTtc11P.1.120.000484
ORF3a65L65FCtcTtc11P.60.003145