CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF3a : Mut = L52F

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF3a52L52FnonsynCttTtt61706170125546-25548

Details of the mutation L52F within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF3a52L52FCttTtt61706170All0.00118
ORF3a52L52FCttTtt14981498B.1.3510.04453
ORF3a52L52FCttTtt10411041AY.40.00162
ORF3a52L52FCttTtt813813B.1.1.70.000728
ORF3a52L52FCttTtt412412AY.330.027513
ORF3a52L52FCttTtt212212B.1.362.21
ORF3a52L52FCttTtt151151AY.390.003731
ORF3a52L52FCttTtt146146B.1.617.20.00055
ORF3a52L52FCttTtt125125AY.430.000554
ORF3a52L52FCttTtt103103AY.1030.00064
ORF3a52L52FCttTtt8282AY.440.000499
ORF3a52L52FCttTtt8080B.1.20.000704
ORF3a52L52FCttTtt7777AY.850.032892
ORF3a52L52FCttTtt7171B.1.1770.000935
ORF3a52L52FCttTtt6969B.10.000632
ORF3a52L52FCttTtt6666B.1.4290.001553
ORF3a52L52FCttTtt5959AY.250.000355
ORF3a52L52FCttTtt4545B.1.4270.002272
ORF3a52L52FCttTtt4141AY.60.001686
ORF3a52L52FCttTtt4141B.1.4780.482353
ORF3a52L52FCttTtt3838B.1.5900.172727
ORF3a52L52FCttTtt3737B.1.10.000671
ORF3a52L52FCttTtt3636AY.1190.001271
ORF3a52L52FCttTtt3434AY.1020.000901
ORF3a52L52FCttTtt3232B.1.5260.000752
ORF3a52L52FCttTtt2929AY.710.013777
ORF3a52L52FCttTtt2727AY.30.000269
ORF3a52L52FCttTtt2323AY.1000.001058
ORF3a52L52FCttTtt2323AY.99.20.00212
ORF3a52L52FCttTtt2323P.10.000362
ORF3a52L52FCttTtt2222AY.39.10.000871
ORF3a52L52FCttTtt2121B.1.564.10.033123
ORF3a52L52FCttTtt1919B.1.1.2160.016919
ORF3a52L52FCttTtt1919B.6.60.016889
ORF3a52L52FCttTtt1818B.1.1.5190.000715
ORF3a52L52FCttTtt1818B.1.416.10.028125
ORF3a52L52FCttTtt1616AY.420.000644
ORF3a52L52FCttTtt1515A.2.5.20.023585
ORF3a52L52FCttTtt1414AY.50.000289
ORF3a52L52FCttTtt1414B.1.6210.001239
ORF3a52L52FCttTtt1414P.1.170.002265
ORF3a52L52FCttTtt1313B.1.1600.000405
ORF3a52L52FCttTtt1313B.1.6340.044521
ORF3a52L52FCttTtt1212AY.290.000189
ORF3a52L52FCttTtt1212B.1.3770.054795
ORF3a52L52FCttTtt1111AY.160.004176
ORF3a52L52FCttTtt1111AY.9.20.000404
ORF3a52L52FCttTtt1010AY.240.00431
ORF3a52L52FCttTtt1010P.1.150.002323
ORF3a52L52FCttTtt88AD.20.001752
ORF3a52L52FCttTtt88AY.470.000249
ORF3a52L52FCttTtt88AY.540.000763
ORF3a52L52FCttTtt88B.1.4990.008403
ORF3a52L52FCttTtt88B.1.617.10.001032
ORF3a52L52FCttTtt77AY.4.50.000752
ORF3a52L52FCttTtt77B.1.2580.000466
ORF3a52L52FCttTtt77B.1.258.240.075269
ORF3a52L52FCttTtt77B.1.5240.009845
ORF3a52L52FCttTtt77B.400.00255
ORF3a52L52FCttTtt66AY.1200.000223
ORF3a52L52FCttTtt66AY.260.00017
ORF3a52L52FCttTtt66AY.980.000474
ORF3a52L52FCttTtt66AY.990.006296
ORF3a52L52FCttTtt66B.1.110.30.00431
ORF3a52L52FCttTtt66B.1.1110.007051
ORF3a52L52FCttTtt66B.1.36.290.003104
ORF3a52L52FCttTtt66B.1.466.20.002347
ORF3a52L52FCttTtt66P.20.00112
ORF3a52L52FCttTtt66Q.80.000989
ORF3a52L52FCttTtt55AY.1060.001674
ORF3a52L52FCttTtt55AY.270.000324
ORF3a52L52FCttTtt55AY.4.20.000108
ORF3a52L52FCttTtt55B.1.2210.000355
ORF3a52L52FCttTtt55B.1.2370.024876
ORF3a52L52FCttTtt55B.1.2430.000348
ORF3a52L52FCttTtt55B.1.3560.008636
ORF3a52L52FCttTtt55B.1.3610.006443
ORF3a52L52FCttTtt55C.160.005302
ORF3a52L52FCttTtt55D.20.000375
ORF3a52L52FCttTtt55P.1.140.000239
ORF3a52L52FCttTtt44AY.1210.000541
ORF3a52L52FCttTtt44AY.360.000593
ORF3a52L52FCttTtt44AY.610.000419
ORF3a52L52FCttTtt44AY.770.00451
ORF3a52L52FCttTtt44AY.98.10.000194
ORF3a52L52FCttTtt44B.1.1.3060.001754
ORF3a52L52FCttTtt44B.1.1.630.001543
ORF3a52L52FCttTtt44B.1.177.560.00267
ORF3a52L52FCttTtt44B.1.177.810.000757
ORF3a52L52FCttTtt44B.1.4700.005618
ORF3a52L52FCttTtt44P.1.100.001078
ORF3a52L52FCttTtt44Q.30.00058
ORF3a52L52FCttTtt33A.2.5.10.014423
ORF3a52L52FCttTtt33AY.1170.000254
ORF3a52L52FCttTtt33AY.1180.000188
ORF3a52L52FCttTtt33AY.29.10.000662
ORF3a52L52FCttTtt33AY.370.000948
ORF3a52L52FCttTtt33AY.550.002752
ORF3a52L52FCttTtt33AY.640.001786
ORF3a52L52FCttTtt33AY.70.000588
ORF3a52L52FCttTtt33AY.900.002053
ORF3a52L52FCttTtt33B.1.1.2140.000166
ORF3a52L52FCttTtt33B.1.1.2570.029126
ORF3a52L52FCttTtt33B.1.1.3010.003538
ORF3a52L52FCttTtt33B.1.1.3280.050847
ORF3a52L52FCttTtt33B.1.1.3890.018182
ORF3a52L52FCttTtt33B.1.1.540.009063
ORF3a52L52FCttTtt33B.1.177.530.007177
ORF3a52L52FCttTtt33B.1.177.80.002257
ORF3a52L52FCttTtt33B.1.258.170.000312
ORF3a52L52FCttTtt33B.1.360.000438
ORF3a52L52FCttTtt33B.1.5950.000783
ORF3a52L52FCttTtt33C.370.000348
ORF3a52L52FCttTtt22A0.000774
ORF3a52L52FCttTtt22A.2.50.000998
ORF3a52L52FCttTtt22AY.1130.000285
ORF3a52L52FCttTtt22AY.200.000078
ORF3a52L52FCttTtt22AY.230.000139
ORF3a52L52FCttTtt22AY.3.10.000171
ORF3a52L52FCttTtt22AY.34.10.00102
ORF3a52L52FCttTtt22AY.4.2.10.000298
ORF3a52L52FCttTtt22AY.460.000208
ORF3a52L52FCttTtt22AY.660.002139
ORF3a52L52FCttTtt22AY.690.000373
ORF3a52L52FCttTtt22AY.700.000417
ORF3a52L52FCttTtt22AY.740.000231
ORF3a52L52FCttTtt22AY.820.002714
ORF3a52L52FCttTtt22AY.9.10.000167
ORF3a52L52FCttTtt22B.1.1.2220.000408
ORF3a52L52FCttTtt22B.1.1.3040.005618
ORF3a52L52FCttTtt22B.1.1.3160.00185
ORF3a52L52FCttTtt22B.1.1.5170.013605
ORF3a52L52FCttTtt22B.1.1460.008475
ORF3a52L52FCttTtt22B.1.177.730.001133
ORF3a52L52FCttTtt22B.1.177.860.000367
ORF3a52L52FCttTtt22B.1.258.140.001961
ORF3a52L52FCttTtt22B.1.351.50.001199
ORF3a52L52FCttTtt22B.1.36.80.002
ORF3a52L52FCttTtt22B.1.3620.003082
ORF3a52L52FCttTtt22B.1.4320.022472
ORF3a52L52FCttTtt22B.1.5170.000854
ORF3a52L52FCttTtt22B.1.5440.012048
ORF3a52L52FCttTtt22B.1.5960.000174
ORF3a52L52FCttTtt22B.1.617.30.00597
ORF3a52L52FCttTtt22P.1.120.000968
ORF3a52L52FCttTtt22R.10.00018
ORF3a52L52FCttTtt11AD.10.004115
ORF3a52L52FCttTtt11AY.10.000396
ORF3a52L52FCttTtt11AY.1010.00049
ORF3a52L52FCttTtt11AY.1050.000643
ORF3a52L52FCttTtt11AY.1070.000466
ORF3a52L52FCttTtt11AY.1100.000113
ORF3a52L52FCttTtt11AY.1110.000183
ORF3a52L52FCttTtt11AY.1140.000231
ORF3a52L52FCttTtt11AY.1160.000287
ORF3a52L52FCttTtt11AY.120.20.001285
ORF3a52L52FCttTtt11AY.130.000161
ORF3a52L52FCttTtt11AY.140.000088
ORF3a52L52FCttTtt11AY.16.10.00047
ORF3a52L52FCttTtt11AY.190.00114
ORF3a52L52FCttTtt11AY.280.00189
ORF3a52L52FCttTtt11AY.320.000532
ORF3a52L52FCttTtt11AY.4.40.000409
ORF3a52L52FCttTtt11AY.450.000122
ORF3a52L52FCttTtt11AY.5.30.000337
ORF3a52L52FCttTtt11AY.5.40.000277
ORF3a52L52FCttTtt11AY.500.000799
ORF3a52L52FCttTtt11AY.530.000288
ORF3a52L52FCttTtt11AY.580.000907
ORF3a52L52FCttTtt11AY.720.001361
ORF3a52L52FCttTtt11AY.750.000056
ORF3a52L52FCttTtt11AY.75.10.00018
ORF3a52L52FCttTtt11AY.840.000437
ORF3a52L52FCttTtt11AY.860.00083
ORF3a52L52FCttTtt11AY.90.000068
ORF3a52L52FCttTtt11AY.930.000273
ORF3a52L52FCttTtt11B0.000128
ORF3a52L52FCttTtt11B.1.1.10.000327
ORF3a52L52FCttTtt11B.1.1.1010.01
ORF3a52L52FCttTtt11B.1.1.1410.002012
ORF3a52L52FCttTtt11B.1.1.1610.003534
ORF3a52L52FCttTtt11B.1.1.280.000311
ORF3a52L52FCttTtt11B.1.1.3170.000412
ORF3a52L52FCttTtt11B.1.1.3180.000302
ORF3a52L52FCttTtt11B.1.1.3190.017544
ORF3a52L52FCttTtt11B.1.1.3260.001761
ORF3a52L52FCttTtt11B.1.1.330.000421
ORF3a52L52FCttTtt11B.1.1.3530.020833
ORF3a52L52FCttTtt11B.1.1.3960.045455
ORF3a52L52FCttTtt11B.1.1.3980.003226
ORF3a52L52FCttTtt11B.1.1.4090.002833
ORF3a52L52FCttTtt11B.1.1.4320.001266
ORF3a52L52FCttTtt11B.1.1.4480.002033
ORF3a52L52FCttTtt11B.1.1.4860.001577
ORF3a52L52FCttTtt11B.1.1.570.011494
ORF3a52L52FCttTtt11B.1.1.710.006061
ORF3a52L52FCttTtt11B.1.1030.019231
ORF3a52L52FCttTtt11B.1.160.250.011111
ORF3a52L52FCttTtt11B.1.160.70.002079
ORF3a52L52FCttTtt11B.1.177.120.000152
ORF3a52L52FCttTtt11B.1.177.150.000631
ORF3a52L52FCttTtt11B.1.177.180.00116
ORF3a52L52FCttTtt11B.1.177.820.000477
ORF3a52L52FCttTtt11B.1.1890.004292
ORF3a52L52FCttTtt11B.1.2220.001692
ORF3a52L52FCttTtt11B.1.2320.000537
ORF3a52L52FCttTtt11B.1.2340.000132
ORF3a52L52FCttTtt11B.1.2400.000216
ORF3a52L52FCttTtt11B.1.3110.000275
ORF3a52L52FCttTtt11B.1.3360.002439
ORF3a52L52FCttTtt11B.1.36.10.00114
ORF3a52L52FCttTtt11B.1.36.180.00042
ORF3a52L52FCttTtt11B.1.3670.000792
ORF3a52L52FCttTtt11B.1.3690.000285
ORF3a52L52FCttTtt11B.1.3890.001002
ORF3a52L52FCttTtt11B.1.4230.010204
ORF3a52L52FCttTtt11B.1.4680.005714
ORF3a52L52FCttTtt11B.1.5250.000113
ORF3a52L52FCttTtt11B.1.5600.00463
ORF3a52L52FCttTtt11B.1.5610.000397
ORF3a52L52FCttTtt11B.1.5760.000907
ORF3a52L52FCttTtt11B.1.5770.000687
ORF3a52L52FCttTtt11B.1.5820.000491
ORF3a52L52FCttTtt11B.1.5870.001898
ORF3a52L52FCttTtt11B.290.003509
ORF3a52L52FCttTtt11C.230.005814
ORF3a52L52FCttTtt11C.360.000911
ORF3a52L52FCttTtt11C.36.30.000567
ORF3a52L52FCttTtt11C.40.01
ORF3a52L52FCttTtt11P.1.130.000898
ORF3a52L52FCttTtt11P.40.003802
ORF3a52L52FCttTtt11W.20.004831
ORF3a52L52FCttTtt11Z.10.00289