CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF3a : Mut = L46del1

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF3a46L46del1delCtT-tA1040.425528-25530
ORF3a46L46del1delcTtc-t1020.225528-25530
ORF3a46L46del1delcTTc-N1020.225528-25530
ORF3a46L46del1delCTT-NN1010.125528-25530
ORF3a46L46del1delCtTTt-1010.125528-25530

Details of the mutation L46del1 within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF3a46L46del1CtT-tA410All0.000001
ORF3a46L46del1cTTc-N210All0
ORF3a46L46del1cTtc-t210All0
ORF3a46L46del1CtTTt-110All0
ORF3a46L46del1CTT-NN110All0
ORF3a46L46del1CtT-tA45AY.260.000113
ORF3a46L46del1CTT-NN15AY.260.000028
ORF3a46L46del1cTTc-N11AY.30.00001
ORF3a46L46del1cTTc-N11AY.50.000021
ORF3a46L46del1cTtc-t11B.10.000009
ORF3a46L46del1cTtc-t11B.1.10.000018
ORF3a46L46del1CtTTt-11B.1.1.1390.022727