CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF3a : Mut = L46F

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF3a46L46FnonsynCttTtt24202420125528-25530

Details of the mutation L46F within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF3a46L46FCttTtt24202420All0.000463
ORF3a46L46FCttTtt552552B.1.1.3260.971831
ORF3a46L46FCttTtt317317B.1.20.002791
ORF3a46L46FCttTtt277277B.1.1.80.992832
ORF3a46L46FCttTtt134134B.1.617.20.000505
ORF3a46L46FCttTtt130130B.1.1.70.000116
ORF3a46L46FCttTtt9696AY.440.000584
ORF3a46L46FCttTtt8282AY.250.000493
ORF3a46L46FCttTtt7979AY.40.000123
ORF3a46L46FCttTtt7777B.1.1.5190.003058
ORF3a46L46FCttTtt5050AY.1020.001326
ORF3a46L46FCttTtt4848B.1.4290.001129
ORF3a46L46FCttTtt4545P.10.000709
ORF3a46L46FCttTtt3939B.1.1.931
ORF3a46L46FCttTtt3939B.1.5370.78
ORF3a46L46FCttTtt3838AY.430.000168
ORF3a46L46FCttTtt3535AY.1190.001236
ORF3a46L46FCttTtt3333B.1.5250.003734
ORF3a46L46FCttTtt2626B.10.000238
ORF3a46L46FCttTtt2525AY.3.10.002131
ORF3a46L46FCttTtt2020B.1.5950.005219
ORF3a46L46FCttTtt1818AY.1000.000828
ORF3a46L46FCttTtt1818AY.50.000372
ORF3a46L46FCttTtt1616AY.260.000453
ORF3a46L46FCttTtt1515AY.30.000149
ORF3a46L46FCttTtt1515AY.390.000371
ORF3a46L46FCttTtt1414AY.1200.000521
ORF3a46L46FCttTtt1313AY.240.005603
ORF3a46L46FCttTtt1010B.1.10.000181
ORF3a46L46FCttTtt99B.1.1770.000119
ORF3a46L46FCttTtt77AY.1030.000043
ORF3a46L46FCttTtt77B.1.5960.00061
ORF3a46L46FCttTtt55B.1.438.10.000536
ORF3a46L46FCttTtt44B.1.2060.003263
ORF3a46L46FCttTtt44B.1.3400.017167
ORF3a46L46FCttTtt44B.1.36.80.004
ORF3a46L46FCttTtt44B.1.5260.000094
ORF3a46L46FCttTtt44B.1.617.10.000516
ORF3a46L46FCttTtt33AY.1100.000338
ORF3a46L46FCttTtt33AY.130.000483
ORF3a46L46FCttTtt33AY.420.000121
ORF3a46L46FCttTtt33B.1.1.2220.000612
ORF3a46L46FCttTtt33B.1.177.20.013636
ORF3a46L46FCttTtt33B.1.2340.000396
ORF3a46L46FCttTtt33B.1.4270.000151
ORF3a46L46FCttTtt33B.1.6210.000266
ORF3a46L46FCttTtt33Q.30.000435
ORF3a46L46FCttTtt22AY.140.000176
ORF3a46L46FCttTtt22AY.290.000032
ORF3a46L46FCttTtt22AY.340.000194
ORF3a46L46FCttTtt22AY.380.000999
ORF3a46L46FCttTtt22AY.450.000243
ORF3a46L46FCttTtt22AY.46.50.000397
ORF3a46L46FCttTtt22AY.730.001331
ORF3a46L46FCttTtt22AY.750.000112
ORF3a46L46FCttTtt22AY.9.20.000073
ORF3a46L46FCttTtt22AY.930.000546
ORF3a46L46FCttTtt22AY.98.10.000097
ORF3a46L46FCttTtt22B.1.1600.000062
ORF3a46L46FCttTtt22B.1.5210.00995
ORF3a46L46FCttTtt22B.1.5810.018868
ORF3a46L46FCttTtt22B.1.6090.000959
ORF3a46L46FCttTtt22D.20.00015
ORF3a46L46FCttTtt22P.1.140.000096
ORF3a46L46FCttTtt22Q.70.002222
ORF3a46L46FCttTtt11AY.10.000396
ORF3a46L46FCttTtt11AY.1170.000085
ORF3a46L46FCttTtt11AY.200.000039
ORF3a46L46FCttTtt11AY.230.00007
ORF3a46L46FCttTtt11AY.23.10.000417
ORF3a46L46FCttTtt11AY.280.00189
ORF3a46L46FCttTtt11AY.330.000067
ORF3a46L46FCttTtt11AY.4.20.000022
ORF3a46L46FCttTtt11AY.4.50.000107
ORF3a46L46FCttTtt11AY.46.20.000635
ORF3a46L46FCttTtt11AY.60.000041
ORF3a46L46FCttTtt11AY.610.000105
ORF3a46L46FCttTtt11AY.650.000533
ORF3a46L46FCttTtt11AY.690.000187
ORF3a46L46FCttTtt11AY.740.000116
ORF3a46L46FCttTtt11AY.790.001211
ORF3a46L46FCttTtt11AY.820.001357
ORF3a46L46FCttTtt11AY.99.20.000092
ORF3a46L46FCttTtt11B.1.1.2400.004695
ORF3a46L46FCttTtt11B.1.1.2650.003155
ORF3a46L46FCttTtt11B.1.1.3060.000438
ORF3a46L46FCttTtt11B.1.1.330.000421
ORF3a46L46FCttTtt11B.1.1.4640.001473
ORF3a46L46FCttTtt11B.1.1.500.000679
ORF3a46L46FCttTtt11B.1.1390.000733
ORF3a46L46FCttTtt11B.1.160.170.001701
ORF3a46L46FCttTtt11B.1.160.180.007299
ORF3a46L46FCttTtt11B.1.177.420.000894
ORF3a46L46FCttTtt11B.1.177.570.000281
ORF3a46L46FCttTtt11B.1.2210.000071
ORF3a46L46FCttTtt11B.1.2580.000067
ORF3a46L46FCttTtt11B.1.3110.000275
ORF3a46L46FCttTtt11B.1.3510.00003
ORF3a46L46FCttTtt11B.1.360.000146
ORF3a46L46FCttTtt11B.1.36.290.000517
ORF3a46L46FCttTtt11B.1.3910.001127
ORF3a46L46FCttTtt11B.1.4090.000781
ORF3a46L46FCttTtt11B.1.4620.007246
ORF3a46L46FCttTtt11B.1.5460.003704
ORF3a46L46FCttTtt11B.1.5640.000426
ORF3a46L46FCttTtt11B.1.5730.006098
ORF3a46L46FCttTtt11B.1.6370.000073
ORF3a46L46FCttTtt11C.330.058824
ORF3a46L46FCttTtt11N.50.001767
ORF3a46L46FCttTtt11P.1.100.000269
ORF3a46L46FCttTtt11P.1.120.000484
ORF3a46L46FCttTtt11P.1.70.000319
ORF3a46L46FCttTtt11Q.40.000455