CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF3a : Mut = L41R

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF3a41L41RnonsyncTccGc117311720.99914725513-25515
ORF3a41L41RnonsyncTCcGT117310.00085251525513-25515

Details of the mutation L41R within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF3a41L41RcTccGc11721173All0.000224
ORF3a41L41RcTCcGT11173All0
ORF3a41L41RcTccGc585586AY.1210.079161
ORF3a41L41RcTCcGT1586AY.1210.000135
ORF3a41L41RcTccGc338338B.1.617.20.001273
ORF3a41L41RcTccGc114114AY.750.006387
ORF3a41L41RcTccGc3434AY.250.000205
ORF3a41L41RcTccGc1717AY.390.00042
ORF3a41L41RcTccGc1010AY.980.00079
ORF3a41L41RcTccGc88AY.1170.000676
ORF3a41L41RcTccGc88AY.430.000035
ORF3a41L41RcTccGc77AY.1030.000043
ORF3a41L41RcTccGc44AY.50.000083
ORF3a41L41RcTccGc33AY.230.000209
ORF3a41L41RcTccGc33AY.440.000018
ORF3a41L41RcTccGc33AY.920.000862
ORF3a41L41RcTccGc22AY.1100.000225
ORF3a41L41RcTccGc22AY.1130.000285
ORF3a41L41RcTccGc22AY.320.001065
ORF3a41L41RcTccGc22AY.34.10.00102
ORF3a41L41RcTccGc22AY.5.30.000675
ORF3a41L41RcTccGc22AY.840.000875
ORF3a41L41RcTccGc22AY.910.001461
ORF3a41L41RcTccGc22B.1.1.70.000002
ORF3a41L41RcTccGc11AY.1020.000027
ORF3a41L41RcTccGc11AY.1040.001984
ORF3a41L41RcTccGc11AY.1080.001103
ORF3a41L41RcTccGc11AY.110.001339
ORF3a41L41RcTccGc11AY.1200.000037
ORF3a41L41RcTccGc11AY.170.008197
ORF3a41L41RcTccGc11AY.200.000039
ORF3a41L41RcTccGc11AY.30.00001
ORF3a41L41RcTccGc11AY.40.000002
ORF3a41L41RcTccGc11AY.420.00004
ORF3a41L41RcTccGc11AY.450.000122
ORF3a41L41RcTccGc11AY.460.000104
ORF3a41L41RcTccGc11AY.470.000031
ORF3a41L41RcTccGc11AY.520.000814
ORF3a41L41RcTccGc11AY.570.000656
ORF3a41L41RcTccGc11AY.9.20.000037
ORF3a41L41RcTccGc11AY.900.000684
ORF3a41L41RcTccGc11AY.99.10.001553
ORF3a41L41RcTccGc11B0.000128
ORF3a41L41RcTccGc11B.1.177.440.000519
ORF3a41L41RcTccGc11B.1.20.000009
ORF3a41L41RcTccGc11B.1.4270.00005