CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF3a : Mut = L41I

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF3a41L41InonsynCtcAtc6286270.99840825513-25515
ORF3a41L41InonsynCtCAtT62810.0015923625513-25515

Details of the mutation L41I within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF3a41L41ICtcAtc627628All0.00012
ORF3a41L41ICtCAtT1628All0
ORF3a41L41ICtcAtc173174AY.440.001053
ORF3a41L41ICtCAtT1174AY.440.000006
ORF3a41L41ICtcAtc8686AY.920.024706
ORF3a41L41ICtcAtc8484B.1.1.70.000075
ORF3a41L41ICtcAtc4949AY.840.021435
ORF3a41L41ICtcAtc3636B.1.617.20.000136
ORF3a41L41ICtcAtc2929AY.250.000174
ORF3a41L41ICtcAtc2626AY.40.00004
ORF3a41L41ICtcAtc2121AY.3.10.00179
ORF3a41L41ICtcAtc1515B.1.177.810.00284
ORF3a41L41ICtcAtc1111B.1.4740.020913
ORF3a41L41ICtcAtc1010AY.200.000389
ORF3a41L41ICtcAtc1010AY.430.000044
ORF3a41L41ICtcAtc99B.10.000082
ORF3a41L41ICtcAtc77A.10.001973
ORF3a41L41ICtcAtc77B.1.20.000062
ORF3a41L41ICtcAtc55AY.30.00005
ORF3a41L41ICtcAtc55AY.390.000124
ORF3a41L41ICtcAtc44AY.470.000124
ORF3a41L41ICtcAtc44B.1.2430.000278
ORF3a41L41ICtcAtc33P.10.000047
ORF3a41L41ICtcAtc22AY.380.000999
ORF3a41L41ICtcAtc22B.1.1.2160.001781
ORF3a41L41ICtcAtc22B.1.5250.000226
ORF3a41L41ICtcAtc22P.1.150.000465
ORF3a41L41ICtcAtc11AY.1010.00049
ORF3a41L41ICtcAtc11AY.1020.000027
ORF3a41L41ICtcAtc11AY.1170.000085
ORF3a41L41ICtcAtc11AY.1190.000035
ORF3a41L41ICtcAtc11AY.120.000316
ORF3a41L41ICtcAtc11AY.260.000028
ORF3a41L41ICtcAtc11AY.360.000148
ORF3a41L41ICtcAtc11AY.4.50.000107
ORF3a41L41ICtcAtc11AY.640.000595
ORF3a41L41ICtcAtc11AY.9.10.000084
ORF3a41L41ICtcAtc11AY.990.001049
ORF3a41L41ICtcAtc11B.1.1.1010.01
ORF3a41L41ICtcAtc11B.1.1.1390.022727
ORF3a41L41ICtcAtc11B.1.1.3060.000438
ORF3a41L41ICtcAtc11B.1.1.5190.00004
ORF3a41L41ICtcAtc11B.1.1770.000013
ORF3a41L41ICtcAtc11B.1.2060.000816
ORF3a41L41ICtcAtc11B.1.3200.001245
ORF3a41L41ICtcAtc11B.1.36.80.001
ORF3a41L41ICtcAtc11B.1.4360.001029
ORF3a41L41ICtcAtc11B.1.5770.000687
ORF3a41L41ICtcAtc11B.1.5950.000261
ORF3a41L41ICtcAtc11B.1.619.10.000641
ORF3a41L41ICtcAtc11C.370.000116
ORF3a41L41ICtcAtc11M.30.076923